RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 KDM2BQ8NHM5 1336 aa8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 SBNO1A3KN83 1393 aa8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 KIF24Q5T7B8 1368 aa8.7□□□□□ -1.02
RN7SL561P-201ENST00000488553 GNAI1P63096 354 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 PSME1Q06323 249 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 ESCO1Q5FWF5 840 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 AEBP1Q8IUX7 1158 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 PANK1Q8TE04 598 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 FRAT1Q92837 279 aaPredicted RBP8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 C19orf44Q9H6X5 657 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 IFT57Q9NWB7 429 aa8.69□□□□□ -1.02
RN7SL561P-201ENST00000488553 NALCNQ8IZF0 1738 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 TCERG1O14776 1098 aaKnown RBP8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 SOX12O15370 315 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 PAK3O75914 559 aaPredicted RBP8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 MS4A1P11836 297 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 AMPHP49418 695 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 ALDH1L2Q3SY69 923 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 CENPQQ7L2Z9 268 aaPredicted RBP8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 SSH1Q8WYL5 1049 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 FLT4P35916 1363 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 PEAK1Q9H792 1746 aa8.68□□□□□ -1.02
RN7SL561P-201ENST00000488553 RGPD8O14715 1765 aaPredicted RBP8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 ARHGEF10O15013 1369 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 VAMP4O75379 141 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 RLBP1P12271 317 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 NWD1Q149M9 1564 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 ZKSCAN2Q63HK3 967 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 C14orf37Q86TY3 774 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 CFAP44Q96MT7 982 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 ORAI2Q96SN7 254 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 EYA1Q99502 592 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 THUMPD2Q9BTF0 503 aaKnown RBP8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 COG6Q9Y2V7 657 aa8.67□□□□□ -1.02
RN7SL561P-201ENST00000488553 PIK3C2AO00443 1686 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 KDRP35968 1356 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 IGSF1Q8N6C5 1336 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 IGHDP01880 384 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 HOXC9P31274 260 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 CLUAP1Q96AJ1 413 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 SMC4Q9NTJ3 1288 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 TNNQ9UQP3 1299 aa8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 LAS1LQ9Y4W2 734 aaKnown RBP8.66□□□□□ -1.02
RN7SL561P-201ENST00000488553 NCOA3Q9Y6Q9 1424 aa8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 FAM83GA6ND36 823 aa8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 CHL1O00533 1208 aa8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 IPO8O15397 1037 aaKnown RBP8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 FOXO3O43524 673 aa8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 KCNH5Q8NCM2 988 aa8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 IP6K1Q92551 441 aa8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 NOB1Q9ULX3 412 aaKnown RBP8.65□□□□□ -1.02
RN7SL561P-201ENST00000488553 RGPD1P0DJD0 1748 aa8.65□□□□□ -1.03
RN7SL561P-201ENST00000488553 USP54Q70EL1 1684 aa8.65□□□□□ -1.03
RN7SL561P-201ENST00000488553 TRIM27P14373 513 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 DCTN1Q14203 1278 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 MVPQ14764 893 aaKnown RBP8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 MTHFSDQ2M296 383 aaKnown RBP8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 ATF7IPQ6VMQ6 1270 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 KRT28Q7Z3Y7 464 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 TSPYL6Q8N831 410 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 C8orf58Q8NAV2 365 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 ARHGAP45Q92619 1136 aa8.64□□□□□ -1.03
RN7SL561P-201ENST00000488553 RTL1A6NKG5 1358 aa8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 KDM4FA0A1W2PPD8 638 aa8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 GCP02774 474 aa8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 C1orf167Q5SNV9 1468 aa8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 MARF1Q9Y4F3 1742 aaKnown RBP8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 CRB1P82279 1406 aa8.63□□□□□ -1.03
RN7SL561P-201ENST00000488553 KIF16BQ96L93 1317 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 ATF3P18847 181 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 PDE4AP27815 886 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 HSPA2P54652 639 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 MCM10Q7L590 875 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 MST1RQ04912 1400 aa8.62□□□□□ -1.03
RN7SL561P-201ENST00000488553 TMEM94Q12767 1356 aa8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 ELL2O00472 640 aaPredicted RBP8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 SKAP1Q86WV1 359 aa8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 FTSJ3Q8IY81 847 aaKnown RBP8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 RTF1Q92541 710 aaKnown RBP8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 BACH2Q9BYV9 841 aa8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 RWDD1Q9H446 243 aaPredicted RBP8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 DDX19BQ9UMR2 479 aa8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 KIAA0232Q92628 1395 aa8.61□□□□□ -1.03
RN7SL561P-201ENST00000488553 NFAT5O94916 1531 aa8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 USP19O94966 1318 aa8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 SOCS7O14512 581 aa8.6□□□□□ -1.03
RN7SL561P-201ENST00000488553 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms