RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 FAM135BQ49AJ0 1406 aa12.18□□□□□ -0.46
ZNF3-215ENST00000487620 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
ZNF3-215ENST00000487620 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
ZNF3-215ENST00000487620 ZNF428Q96B54 188 aa12.18□□□□□ -0.46
ZNF3-215ENST00000487620 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
ZNF3-215ENST00000487620 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
ZNF3-215ENST00000487620 GAS2L3Q86XJ1 694 aa12.18□□□□□ -0.46
ZNF3-215ENST00000487620 SIRT2Q8IXJ6 389 aa12.18□□□□□ -0.46
ZNF3-215ENST00000487620 POLKQ9UBT6 870 aa12.18□□□□□ -0.46
ZNF3-215ENST00000487620 CLTCQ00610 1675 aaKnown RBP12.18□□□□□ -0.46
ZNF3-215ENST00000487620 TRIM44Q96DX7 344 aaPredicted RBP12.17□□□□□ -0.46
ZNF3-215ENST00000487620 SLC52A1Q9NWF4 448 aa12.17□□□□□ -0.46
ZNF3-215ENST00000487620 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
ZNF3-215ENST00000487620 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
ZNF3-215ENST00000487620 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
ZNF3-215ENST00000487620 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
ZNF3-215ENST00000487620 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
ZNF3-215ENST00000487620 GNAI1P63096 354 aa12.16□□□□□ -0.46
ZNF3-215ENST00000487620 SKOR2Q2VWA4 1001 aaPredicted RBP12.16□□□□□ -0.46
ZNF3-215ENST00000487620 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
ZNF3-215ENST00000487620 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
ZNF3-215ENST00000487620 ESPNB1AK53 854 aa12.16□□□□□ -0.46
ZNF3-215ENST00000487620 SSFA2P28290 1259 aa12.16□□□□□ -0.46
ZNF3-215ENST00000487620 CALD1Q05682 793 aaKnown RBP12.16□□□□□ -0.46
ZNF3-215ENST00000487620 PTCH1Q13635 1447 aa12.16□□□□□ -0.46
ZNF3-215ENST00000487620 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
ZNF3-215ENST00000487620 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
ZNF3-215ENST00000487620 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
ZNF3-215ENST00000487620 CDC42BPGQ6DT37 1551 aa12.15□□□□□ -0.46
ZNF3-215ENST00000487620 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
ZNF3-215ENST00000487620 CDC45O75419 566 aa12.15□□□□□ -0.46
ZNF3-215ENST00000487620 ABCC4O15439 1325 aa12.15□□□□□ -0.47
ZNF3-215ENST00000487620 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 TMEM131LA2VDJ0 1609 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 DIP2CQ9Y2E4 1556 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 PIK3R4Q99570 1358 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 GOLGA6L22H0YM25 854 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 ARHGAP31Q2M1Z3 1444 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 PTMSP20962 102 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 C8orf58Q8NAV2 365 aa12.14□□□□□ -0.47
ZNF3-215ENST00000487620 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
ZNF3-215ENST00000487620 FAM83GA6ND36 823 aa12.13□□□□□ -0.47
ZNF3-215ENST00000487620 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
ZNF3-215ENST00000487620 ARHGEF40Q8TER5 1519 aa12.13□□□□□ -0.47
ZNF3-215ENST00000487620 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
ZNF3-215ENST00000487620 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
ZNF3-215ENST00000487620 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
ZNF3-215ENST00000487620 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
ZNF3-215ENST00000487620 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
ZNF3-215ENST00000487620 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
ZNF3-215ENST00000487620 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
ZNF3-215ENST00000487620 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
ZNF3-215ENST00000487620 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
ZNF3-215ENST00000487620 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
ZNF3-215ENST00000487620 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
ZNF3-215ENST00000487620 APBB1O00213 710 aa12.11□□□□□ -0.47
ZNF3-215ENST00000487620 IL13P35225 146 aa12.11□□□□□ -0.47
ZNF3-215ENST00000487620 NME9Q86XW9 330 aa12.11□□□□□ -0.47
ZNF3-215ENST00000487620 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
ZNF3-215ENST00000487620 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
ZNF3-215ENST00000487620 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
ZNF3-215ENST00000487620 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
ZNF3-215ENST00000487620 NASPP49321 788 aaPredicted RBP12.09□□□□□ -0.47
ZNF3-215ENST00000487620 LMOD3Q0VAK6 560 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 RABEP1Q15276 862 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 TTC22Q5TAA0 569 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 DCTPP1Q9H773 170 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
ZNF3-215ENST00000487620 ATP7BP35670 1465 aa12.08□□□□□ -0.47
ZNF3-215ENST00000487620 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
ZNF3-215ENST00000487620 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
ZNF3-215ENST00000487620 ANP32BQ92688 251 aaKnown RBP12.08□□□□□ -0.48
ZNF3-215ENST00000487620 REREQ9P2R6 1566 aa12.08□□□□□ -0.48
ZNF3-215ENST00000487620 NEO1Q92859 1461 aa12.08□□□□□ -0.48
ZNF3-215ENST00000487620 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
ZNF3-215ENST00000487620 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
ZNF3-215ENST00000487620 CCDC173Q0VFZ6 552 aa12.07□□□□□ -0.48
ZNF3-215ENST00000487620 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
ZNF3-215ENST00000487620 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
ZNF3-215ENST00000487620 RICTORQ6R327 1708 aa12.07□□□□□ -0.48
ZNF3-215ENST00000487620 PKP1Q13835 747 aa12.06□□□□□ -0.48
ZNF3-215ENST00000487620 HSP90AA2PQ14568 343 aaPredicted RBP12.06□□□□□ -0.48
ZNF3-215ENST00000487620 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
ZNF3-215ENST00000487620 CLEC17AQ6ZS10 378 aa12.06□□□□□ -0.48
ZNF3-215ENST00000487620 COG3Q96JB2 828 aa12.06□□□□□ -0.48
ZNF3-215ENST00000487620 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
ZNF3-215ENST00000487620 SDSP20132 328 aa12.05□□□□□ -0.48
ZNF3-215ENST00000487620 NUCB2P80303 420 aa12.05□□□□□ -0.48
ZNF3-215ENST00000487620 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
ZNF3-215ENST00000487620 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
ZNF3-215ENST00000487620 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
ZNF3-215ENST00000487620 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
ZNF3-215ENST00000487620 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
ZNF3-215ENST00000487620 ST18O60284 1047 aa12.04□□□□□ -0.48
ZNF3-215ENST00000487620 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
ZNF3-215ENST00000487620 MSH6P52701 1360 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms