RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 CDCA7Q9BWT1 371 aaPredicted RBP26.77■■□□□ 1.88
GMDS-205ENST00000486793 CARD10Q9BWT7 1032 aa26.77■■□□□ 1.88
GMDS-205ENST00000486793 CPSF1Q10570 1443 aaKnown RBP26.76■■□□□ 1.87
GMDS-205ENST00000486793 KTN1Q86UP2 1357 aaKnown RBP26.76■■□□□ 1.87
GMDS-205ENST00000486793 BCL11BQ9C0K0 894 aaPredicted RBP26.76■■□□□ 1.87
GMDS-205ENST00000486793 TRPM1Q7Z4N2 1603 aa26.75■■□□□ 1.87
GMDS-205ENST00000486793 PIK3C2AO00443 1686 aa26.74■■□□□ 1.87
GMDS-205ENST00000486793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.73■■□□□ 1.87
GMDS-205ENST00000486793 PARP4Q9UKK3 1724 aaKnown RBP26.73■■□□□ 1.87
GMDS-205ENST00000486793 CARD11Q9BXL7 1154 aa26.72■■□□□ 1.87
GMDS-205ENST00000486793 EXOC5O00471 708 aa26.71■■□□□ 1.87
GMDS-205ENST00000486793 PROM2Q8N271 834 aa26.71■■□□□ 1.87
GMDS-205ENST00000486793 SPON1Q9HCB6 807 aa26.71■■□□□ 1.87
GMDS-205ENST00000486793 KCNQ2O43526 872 aa26.7■■□□□ 1.86
GMDS-205ENST00000486793 COL18A1P39060 1754 aa26.7■■□□□ 1.86
GMDS-205ENST00000486793 TMC1Q8TDI8 760 aa26.69■■□□□ 1.86
GMDS-205ENST00000486793 RREB1Q92766 1687 aa26.68■■□□□ 1.86
GMDS-205ENST00000486793 NME9Q86XW9 330 aa26.67■■□□□ 1.86
GMDS-205ENST00000486793 ANO8Q9HCE9 1232 aaPredicted RBP26.67■■□□□ 1.86
GMDS-205ENST00000486793 PEAK1Q9H792 1746 aa26.66■■□□□ 1.86
GMDS-205ENST00000486793 SLC12A5Q9H2X9 1139 aa26.66■■□□□ 1.86
GMDS-205ENST00000486793 PPP1R1BQ9UD71 204 aaPredicted RBP26.66■■□□□ 1.86
GMDS-205ENST00000486793 BCL9O00512 1426 aa26.65■■□□□ 1.86
GMDS-205ENST00000486793 NUP188Q5SRE5 1749 aa26.65■■□□□ 1.86
GMDS-205ENST00000486793 USP31Q70CQ4 1352 aa26.65■■□□□ 1.86
GMDS-205ENST00000486793 SBNO2Q9Y2G9 1366 aa26.65■■□□□ 1.86
GMDS-205ENST00000486793 CCDC7Q96M83 1385 aa26.64■■□□□ 1.86
GMDS-205ENST00000486793 LRRC37A3O60309 1634 aa26.64■■□□□ 1.85
GMDS-205ENST00000486793 HDGFL2Q7Z4V5 671 aaPredicted RBP26.63■■□□□ 1.85
GMDS-205ENST00000486793 NLRP2Q9NX02 1062 aa26.63■■□□□ 1.85
GMDS-205ENST00000486793 NFAT5O94916 1531 aa26.63■■□□□ 1.85
GMDS-205ENST00000486793 PDGFDQ9GZP0 370 aaPredicted RBP26.62■■□□□ 1.85
GMDS-205ENST00000486793 TXNRD1Q16881 649 aa26.61■■□□□ 1.85
GMDS-205ENST00000486793 CD163L1Q9NR16 1453 aa26.6■■□□□ 1.85
GMDS-205ENST00000486793 ERBB3P21860 1342 aa26.59■■□□□ 1.85
GMDS-205ENST00000486793 TERF2IPQ9NYB0 399 aa26.58■■□□□ 1.85
GMDS-205ENST00000486793 AKAP12Q02952 1782 aa26.57■■□□□ 1.84
GMDS-205ENST00000486793 ANKRD24Q8TF21 1146 aa26.57■■□□□ 1.84
GMDS-205ENST00000486793 ACSBG1Q96GR2 724 aa26.56■■□□□ 1.84
GMDS-205ENST00000486793 ZBTB7AO95365 584 aa26.55■■□□□ 1.84
GMDS-205ENST00000486793 IL2RBP14784 551 aa26.55■■□□□ 1.84
GMDS-205ENST00000486793 PUS7Q96PZ0 661 aaKnown RBP26.55■■□□□ 1.84
GMDS-205ENST00000486793 STK32BQ9NY57 414 aa26.55■■□□□ 1.84
GMDS-205ENST00000486793 TONSLQ96HA7 1378 aa26.55■■□□□ 1.84
GMDS-205ENST00000486793 SLC15A2Q16348 729 aa26.53■■□□□ 1.84
GMDS-205ENST00000486793 TNS2Q63HR2 1409 aa26.53■■□□□ 1.84
GMDS-205ENST00000486793 A0A1W2PP64 1363 aa26.52■■□□□ 1.84
GMDS-205ENST00000486793 ABCC6O95255 1503 aa26.52■■□□□ 1.84
GMDS-205ENST00000486793 YY1P25490 414 aa26.52■■□□□ 1.84
GMDS-205ENST00000486793 EDC4Q6P2E9 1401 aaKnown RBP26.52■■□□□ 1.84
GMDS-205ENST00000486793 ATF5Q9Y2D1 282 aaPredicted RBP26.52■■□□□ 1.84
GMDS-205ENST00000486793 NINLQ9Y2I6 1382 aa26.51■■□□□ 1.83
GMDS-205ENST00000486793 DCAF8L1A6NGE4 600 aa26.51■■□□□ 1.83
GMDS-205ENST00000486793 SBF2Q86WG5 1849 aa26.51■■□□□ 1.83
GMDS-205ENST00000486793 PTGER2P43116 358 aa26.5■■□□□ 1.83
GMDS-205ENST00000486793 RGPD5Q99666 1765 aa26.5■■□□□ 1.83
GMDS-205ENST00000486793 ST20-MTHFSA0A0A6YYL1 179 aa26.49■■□□□ 1.83
GMDS-205ENST00000486793 IP6K1Q92551 441 aa26.49■■□□□ 1.83
GMDS-205ENST00000486793 TESK2Q96S53 571 aa26.49■■□□□ 1.83
GMDS-205ENST00000486793 RGPD3A6NKT7 1758 aaPredicted RBP26.48■■□□□ 1.83
GMDS-205ENST00000486793 RGPD4Q7Z3J3 1758 aa26.48■■□□□ 1.83
GMDS-205ENST00000486793 MON2Q7Z3U7 1717 aa26.48■■□□□ 1.83
GMDS-205ENST00000486793 LTV1Q96GA3 475 aaPredicted RBP26.47■■□□□ 1.83
GMDS-205ENST00000486793 WNK3Q9BYP7 1800 aa26.45■■□□□ 1.82
GMDS-205ENST00000486793 DDX54Q8TDD1 881 aaKnown RBP26.44■■□□□ 1.82
GMDS-205ENST00000486793 FBLN1P23142 703 aa26.43■■□□□ 1.82
GMDS-205ENST00000486793 COG3Q96JB2 828 aa26.43■■□□□ 1.82
GMDS-205ENST00000486793 MTFR1LQ9H019 292 aa26.42■■□□□ 1.82
GMDS-205ENST00000486793 SLC24A1O60721 1099 aa26.41■■□□□ 1.82
GMDS-205ENST00000486793 LRRC4BQ9NT99 713 aa26.4■■□□□ 1.82
GMDS-205ENST00000486793 MAP3K19Q56UN5 1328 aa26.39■■□□□ 1.82
GMDS-205ENST00000486793 CASZ1Q86V15 1759 aa26.39■■□□□ 1.82
GMDS-205ENST00000486793 USP54Q70EL1 1684 aa26.39■■□□□ 1.82
GMDS-205ENST00000486793 SGIP1Q9BQI5 828 aa26.39■■□□□ 1.82
GMDS-205ENST00000486793 HOXC9P31274 260 aa26.38■■□□□ 1.81
GMDS-205ENST00000486793 AMPHP49418 695 aa26.38■■□□□ 1.81
GMDS-205ENST00000486793 SYT17Q9BSW7 474 aa26.38■■□□□ 1.81
GMDS-205ENST00000486793 FHDC1Q9C0D6 1143 aaPredicted RBP26.38■■□□□ 1.81
GMDS-205ENST00000486793 ZNF827Q17R98 1081 aa26.36■■□□□ 1.81
GMDS-205ENST00000486793 PRIM1P49642 420 aaKnown RBP26.33■■□□□ 1.81
GMDS-205ENST00000486793 NHSQ6T4R5 1651 aa26.33■■□□□ 1.81
GMDS-205ENST00000486793 FYB1O15117 783 aa26.32■■□□□ 1.8
GMDS-205ENST00000486793 ZCRB1Q8TBF4 217 aaKnown RBP26.32■■□□□ 1.8
GMDS-205ENST00000486793 AKT1S1Q96B36 256 aa26.32■■□□□ 1.8
GMDS-205ENST00000486793 SYTL4Q96C24 671 aaPredicted RBP26.32■■□□□ 1.8
GMDS-205ENST00000486793 ARXQ96QS3 562 aa26.32■■□□□ 1.8
GMDS-205ENST00000486793 LTN1O94822 1766 aa26.31■■□□□ 1.8
GMDS-205ENST00000486793 RRS1Q15050 365 aaKnown RBP26.31■■□□□ 1.8
GMDS-205ENST00000486793 SLC27A3Q5K4L6 730 aa26.31■■□□□ 1.8
GMDS-205ENST00000486793 ANKRD36BQ8N2N9 1353 aa26.31■■□□□ 1.8
GMDS-205ENST00000486793 TMF1P82094 1093 aa26.3■■□□□ 1.8
GMDS-205ENST00000486793 GGNBP2Q9H3C7 697 aa26.3■■□□□ 1.8
GMDS-205ENST00000486793 UTRNP46939 3433 aa26.29■■□□□ 1.8
GMDS-205ENST00000486793 KCNQ4P56696 695 aa26.29■■□□□ 1.8
GMDS-205ENST00000486793 NBPF6Q5VWK0 638 aa26.28■■□□□ 1.8
GMDS-205ENST00000486793 NBPF4Q96M43 638 aa26.28■■□□□ 1.8
GMDS-205ENST00000486793 MYOM1P52179 1685 aa26.27■■□□□ 1.8
GMDS-205ENST00000486793 USHBP1Q8N6Y0 703 aa26.25■■□□□ 1.79
GMDS-205ENST00000486793 SLC16A10Q8TF71 515 aa26.24■■□□□ 1.79
GMDS-205ENST00000486793 TFCP2L1Q9NZI6 479 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms