RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 PLEKHM2Q8IWE5 1019 aa7.46□□□□□ -1.22
XPA-203ENST00000485042 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
XPA-203ENST00000485042 MTRQ99707 1265 aa7.46□□□□□ -1.22
XPA-203ENST00000485042 PRDM9Q9NQV7 894 aa7.46□□□□□ -1.22
XPA-203ENST00000485042 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.46□□□□□ -1.22
XPA-203ENST00000485042 NOVA2Q9UNW9 492 aaKnown RBP7.46□□□□□ -1.22
XPA-203ENST00000485042 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
XPA-203ENST00000485042 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
XPA-203ENST00000485042 CCDC24Q8N4L8 307 aa7.45□□□□□ -1.22
XPA-203ENST00000485042 STK32AQ8WU08 396 aa7.45□□□□□ -1.22
XPA-203ENST00000485042 ARHGAP9Q9BRR9 750 aa7.45□□□□□ -1.22
XPA-203ENST00000485042 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
XPA-203ENST00000485042 RASA1P20936 1047 aa7.44□□□□□ -1.22
XPA-203ENST00000485042 NCOA4Q13772 614 aa7.44□□□□□ -1.22
XPA-203ENST00000485042 ZBTB33Q86T24 672 aa7.44□□□□□ -1.22
XPA-203ENST00000485042 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
XPA-203ENST00000485042 ADH1BP00325 375 aa7.43□□□□□ -1.22
XPA-203ENST00000485042 PLPP7Q8NBV4 271 aa7.43□□□□□ -1.22
XPA-203ENST00000485042 ADAM32Q8TC27 787 aa7.43□□□□□ -1.22
XPA-203ENST00000485042 FAM196BA6NMK8 535 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L15C9J2P7 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L10C9JJH3 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L13C9JLJ4 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L12C9JPN9 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L11C9JVI0 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L21D6R901 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L18D6R9N7 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L22D6RA61 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L17D6RBQ6 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L19D6RCP7 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L20D6RJB6 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 TLL1O43897 1013 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 ZPR1O75312 459 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 USP17L24Q0WX57 530 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 CRTC2Q53ET0 693 aaPredicted RBP7.42□□□□□ -1.22
XPA-203ENST00000485042 FOXD4L5Q5VV16 416 aaPredicted RBP7.42□□□□□ -1.22
XPA-203ENST00000485042 DZIP3Q86Y13 1208 aaKnown RBP7.42□□□□□ -1.22
XPA-203ENST00000485042 FOXD4L4Q8WXT5 416 aaPredicted RBP7.42□□□□□ -1.22
XPA-203ENST00000485042 ZNF516Q92618 1163 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 OCSTAMPQ9BR26 566 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 UNC93B1Q9H1C4 597 aa7.42□□□□□ -1.22
XPA-203ENST00000485042 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
XPA-203ENST00000485042 CCDC27Q2M243 656 aa7.41□□□□□ -1.22
XPA-203ENST00000485042 EML3Q32P44 896 aa7.41□□□□□ -1.22
XPA-203ENST00000485042 SND1Q7KZF4 910 aaKnown RBP eCLIP7.41□□□□□ -1.22
XPA-203ENST00000485042 PHTF2Q8N3S3 785 aa7.41□□□□□ -1.22
XPA-203ENST00000485042 FAM200AQ8TCP9 573 aa7.41□□□□□ -1.22
XPA-203ENST00000485042 CARD14Q9BXL6 1004 aa7.41□□□□□ -1.22
XPA-203ENST00000485042 MAGEB6P1A0A0J9YX57 407 aa7.4□□□□□ -1.22
XPA-203ENST00000485042 MAP7D1Q3KQU3 841 aa7.4□□□□□ -1.22
XPA-203ENST00000485042 PTK7Q13308 1070 aa7.39□□□□□ -1.23
XPA-203ENST00000485042 AGERQ15109 404 aa7.39□□□□□ -1.23
XPA-203ENST00000485042 PTCRAQ6ISU1 281 aaPredicted RBP7.39□□□□□ -1.23
XPA-203ENST00000485042 SH3BP5LQ7L8J4 393 aa7.39□□□□□ -1.23
XPA-203ENST00000485042 TRIM50Q86XT4 487 aa7.39□□□□□ -1.23
XPA-203ENST00000485042 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
XPA-203ENST00000485042 CCER1Q8TC90 406 aaPredicted RBP7.39□□□□□ -1.23
XPA-203ENST00000485042 CDCA7Q9BWT1 371 aaPredicted RBP7.39□□□□□ -1.23
XPA-203ENST00000485042 GNEQ9Y223 722 aaKnown RBP7.39□□□□□ -1.23
XPA-203ENST00000485042 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
XPA-203ENST00000485042 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
XPA-203ENST00000485042 NKX2-3Q8TAU0 364 aa7.38□□□□□ -1.23
XPA-203ENST00000485042 SLC6A16Q9GZN6 736 aa7.38□□□□□ -1.23
XPA-203ENST00000485042 DOLKQ9UPQ8 538 aa7.38□□□□□ -1.23
XPA-203ENST00000485042 NOD1Q9Y239 953 aa7.38□□□□□ -1.23
XPA-203ENST00000485042 GGCXP38435 758 aa7.37□□□□□ -1.23
XPA-203ENST00000485042 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
XPA-203ENST00000485042 TSGA10IPQ3SY00 556 aa7.37□□□□□ -1.23
XPA-203ENST00000485042 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
XPA-203ENST00000485042 ZNF594Q96JF6 807 aaPredicted RBP7.37□□□□□ -1.23
XPA-203ENST00000485042 ARID4AP29374 1257 aaPredicted RBP7.36□□□□□ -1.23
XPA-203ENST00000485042 DPYDQ12882 1025 aa7.36□□□□□ -1.23
XPA-203ENST00000485042 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
XPA-203ENST00000485042 BAP1Q92560 729 aa7.36□□□□□ -1.23
XPA-203ENST00000485042 DNAAF2Q9NVR5 837 aaKnown RBP7.36□□□□□ -1.23
XPA-203ENST00000485042 CHIC2Q9UKJ5 165 aa7.36□□□□□ -1.23
XPA-203ENST00000485042 SSFA2P28290 1259 aa7.35□□□□□ -1.23
XPA-203ENST00000485042 CLDN10P78369 228 aa7.35□□□□□ -1.23
XPA-203ENST00000485042 MYT1Q01538 1121 aa7.35□□□□□ -1.23
XPA-203ENST00000485042 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
XPA-203ENST00000485042 PHLDB3Q6NSJ2 640 aa7.35□□□□□ -1.23
XPA-203ENST00000485042 CLP1Q92989 425 aaKnown RBP7.35□□□□□ -1.23
XPA-203ENST00000485042 RBM19Q9Y4C8 960 aaKnown RBP7.35□□□□□ -1.23
XPA-203ENST00000485042 POTECB2RU33 542 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 GIGYF1O75420 1035 aaPredicted RBP7.34□□□□□ -1.23
XPA-203ENST00000485042 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 FAM69CQ0P6D2 419 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 ERFEQ4G0M1 354 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 RNF20Q5VTR2 975 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 TRIM67Q6ZTA4 783 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 SH3RF1Q7Z6J0 888 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 TXNDC2Q86VQ3 553 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 LARGE2Q8N3Y3 721 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 ZNF428Q96B54 188 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 SLC10A4Q96EP9 437 aa7.34□□□□□ -1.23
XPA-203ENST00000485042 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
XPA-203ENST00000485042 DGAT1O75907 488 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 GTF2IP78347 998 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 PSME1Q06323 249 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms