RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 NME9Q86XW9 330 aa21.92■■□□□ 1.1
UBE2E1-209ENST00000484048 GGNBP2Q9H3C7 697 aa21.92■■□□□ 1.1
UBE2E1-209ENST00000484048 OVOS2A0A0J9YW53 1432 aa21.91■■□□□ 1.1
UBE2E1-209ENST00000484048 OVOS2Q6IE36 1432 aa21.91■■□□□ 1.1
UBE2E1-209ENST00000484048 FAM182BQ5T319 152 aa21.91■■□□□ 1.1
UBE2E1-209ENST00000484048 TNS1Q9HBL0 1735 aaKnown RBP21.91■■□□□ 1.1
UBE2E1-209ENST00000484048 DCAF8L1A6NGE4 600 aa21.9■■□□□ 1.1
UBE2E1-209ENST00000484048 USP31Q70CQ4 1352 aa21.89■■□□□ 1.1
UBE2E1-209ENST00000484048 PLEKHG5O94827 1062 aa21.89■■□□□ 1.09
UBE2E1-209ENST00000484048 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
UBE2E1-209ENST00000484048 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
UBE2E1-209ENST00000484048 FAM83GA6ND36 823 aa21.88■■□□□ 1.09
UBE2E1-209ENST00000484048 MORC1Q86VD1 984 aa21.88■■□□□ 1.09
UBE2E1-209ENST00000484048 CAMKK2Q96RR4 588 aa21.88■■□□□ 1.09
UBE2E1-209ENST00000484048 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
UBE2E1-209ENST00000484048 ABCA3Q99758 1704 aa21.87■■□□□ 1.09
UBE2E1-209ENST00000484048 NRAPQ86VF7 1730 aa21.86■■□□□ 1.09
UBE2E1-209ENST00000484048 PAK3O75914 559 aaPredicted RBP21.86■■□□□ 1.09
UBE2E1-209ENST00000484048 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
UBE2E1-209ENST00000484048 ARHGEF10O15013 1369 aa21.86■■□□□ 1.09
UBE2E1-209ENST00000484048 CCER2I3L3R5 266 aa21.85■■□□□ 1.09
UBE2E1-209ENST00000484048 COG3Q96JB2 828 aa21.85■■□□□ 1.09
UBE2E1-209ENST00000484048 PPP1R1BQ9UD71 204 aaPredicted RBP21.85■■□□□ 1.09
UBE2E1-209ENST00000484048 ABTB2Q8N961 1025 aa21.84■■□□□ 1.09
UBE2E1-209ENST00000484048 LTN1O94822 1766 aa21.84■■□□□ 1.09
UBE2E1-209ENST00000484048 PHRF1Q9P1Y6 1649 aaKnown RBP21.84■■□□□ 1.09
UBE2E1-209ENST00000484048 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
UBE2E1-209ENST00000484048 LMOD2Q6P5Q4 547 aa21.83■■□□□ 1.09
UBE2E1-209ENST00000484048 BTG4Q9NY30 223 aa21.83■■□□□ 1.09
UBE2E1-209ENST00000484048 SLIT3O75094 1523 aa21.82■■□□□ 1.08
UBE2E1-209ENST00000484048 THSD7AQ9UPZ6 1657 aa21.82■■□□□ 1.08
UBE2E1-209ENST00000484048 NLRP6P59044 892 aa21.81■■□□□ 1.08
UBE2E1-209ENST00000484048 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 TRIM37O94972 964 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 NLRP13Q86W25 1043 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 SPON1Q9HCB6 807 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 SPATA31A5Q5VU36 1347 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 SPATA31A7Q8IWB4 1347 aa21.8■■□□□ 1.08
UBE2E1-209ENST00000484048 APBA3O96018 575 aa21.79■■□□□ 1.08
UBE2E1-209ENST00000484048 TNNT2P45379 298 aaPredicted RBP21.79■■□□□ 1.08
UBE2E1-209ENST00000484048 NBPF14Q5TI25 921 aa21.78■■□□□ 1.08
UBE2E1-209ENST00000484048 NUTM2GQ5VZR2 741 aa21.78■■□□□ 1.08
UBE2E1-209ENST00000484048 NFAT5O94916 1531 aa21.78■■□□□ 1.08
UBE2E1-209ENST00000484048 CCDC184Q52MB2 194 aa21.77■■□□□ 1.08
UBE2E1-209ENST00000484048 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
UBE2E1-209ENST00000484048 ZNF784Q8NCA9 323 aaPredicted RBP21.77■■□□□ 1.08
UBE2E1-209ENST00000484048 SMG6Q86US8 1419 aaKnown RBP21.77■■□□□ 1.08
UBE2E1-209ENST00000484048 PEAK1Q9H792 1746 aa21.77■■□□□ 1.08
UBE2E1-209ENST00000484048 USP19O94966 1318 aa21.77■■□□□ 1.07
UBE2E1-209ENST00000484048 COL14A1Q05707 1796 aaKnown RBP21.76■■□□□ 1.07
UBE2E1-209ENST00000484048 RREB1Q92766 1687 aa21.76■■□□□ 1.07
UBE2E1-209ENST00000484048 KCNQ2O43526 872 aa21.75■■□□□ 1.07
UBE2E1-209ENST00000484048 NUP188Q5SRE5 1749 aa21.74■■□□□ 1.07
UBE2E1-209ENST00000484048 FBLN1P23142 703 aa21.72■■□□□ 1.07
UBE2E1-209ENST00000484048 MTHFSP49914 203 aa21.72■■□□□ 1.07
UBE2E1-209ENST00000484048 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
UBE2E1-209ENST00000484048 POLKQ9UBT6 870 aa21.72■■□□□ 1.07
UBE2E1-209ENST00000484048 CAMTA1Q9Y6Y1 1673 aa21.72■■□□□ 1.07
UBE2E1-209ENST00000484048 RGPD5Q99666 1765 aa21.71■■□□□ 1.07
UBE2E1-209ENST00000484048 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
UBE2E1-209ENST00000484048 COL3A1P02461 1466 aaPredicted RBP21.7■■□□□ 1.06
UBE2E1-209ENST00000484048 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
UBE2E1-209ENST00000484048 C1QTNF8P60827 252 aa21.68■■□□□ 1.06
UBE2E1-209ENST00000484048 EMILIN1Q9Y6C2 1016 aa21.68■■□□□ 1.06
UBE2E1-209ENST00000484048 COL18A1P39060 1754 aa21.68■■□□□ 1.06
UBE2E1-209ENST00000484048 INSRP06213 1382 aa21.67■■□□□ 1.06
UBE2E1-209ENST00000484048 SPATA31A1Q5TZJ5 1347 aa21.67■■□□□ 1.06
UBE2E1-209ENST00000484048 SOX12O15370 315 aa21.67■■□□□ 1.06
UBE2E1-209ENST00000484048 GCP02774 474 aa21.67■■□□□ 1.06
UBE2E1-209ENST00000484048 KIF24Q5T7B8 1368 aa21.66■■□□□ 1.06
UBE2E1-209ENST00000484048 MAP3K19Q56UN5 1328 aa21.66■■□□□ 1.06
UBE2E1-209ENST00000484048 CFAP53Q96M91 514 aa21.64■■□□□ 1.05
UBE2E1-209ENST00000484048 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.05
UBE2E1-209ENST00000484048 ABCC6O95255 1503 aa21.64■■□□□ 1.05
UBE2E1-209ENST00000484048 RTL1A6NKG5 1358 aa21.63■■□□□ 1.05
UBE2E1-209ENST00000484048 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
UBE2E1-209ENST00000484048 FLT4P35916 1363 aa21.62■■□□□ 1.05
UBE2E1-209ENST00000484048 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
UBE2E1-209ENST00000484048 ARHGEF25Q86VW2 580 aa21.62■■□□□ 1.05
UBE2E1-209ENST00000484048 PDE3BQ13370 1112 aa21.61■■□□□ 1.05
UBE2E1-209ENST00000484048 RGPD2P0DJD1 1756 aa21.61■■□□□ 1.05
UBE2E1-209ENST00000484048 CPDO75976 1380 aa21.61■■□□□ 1.05
UBE2E1-209ENST00000484048 LMO7Q8WWI1 1683 aa21.6■■□□□ 1.05
UBE2E1-209ENST00000484048 AMPHP49418 695 aa21.59■■□□□ 1.05
UBE2E1-209ENST00000484048 HOXC9P31274 260 aa21.58■■□□□ 1.05
UBE2E1-209ENST00000484048 STRN4Q9NRL3 753 aa21.58■■□□□ 1.05
UBE2E1-209ENST00000484048 FAM208AQ9UK61 1670 aaKnown RBP21.57■■□□□ 1.04
UBE2E1-209ENST00000484048 ZC3H6P61129 1189 aaKnown RBP21.57■■□□□ 1.04
UBE2E1-209ENST00000484048 IP6K1Q92551 441 aa21.57■■□□□ 1.04
UBE2E1-209ENST00000484048 DIAPH1O60610 1272 aaKnown RBP21.56■■□□□ 1.04
UBE2E1-209ENST00000484048 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
UBE2E1-209ENST00000484048 BARGINQ6ZT62 677 aa21.56■■□□□ 1.04
UBE2E1-209ENST00000484048 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
UBE2E1-209ENST00000484048 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
UBE2E1-209ENST00000484048 KIAA0232Q92628 1395 aa21.55■■□□□ 1.04
UBE2E1-209ENST00000484048 IL13P35225 146 aa21.54■■□□□ 1.04
UBE2E1-209ENST00000484048 WDR43Q15061 677 aaKnown RBP eCLIP21.54■■□□□ 1.04
UBE2E1-209ENST00000484048 CASZ1Q86V15 1759 aa21.53■■□□□ 1.04
UBE2E1-209ENST00000484048 ZBTB7CA1YPR0 619 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms