RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
CPNE1-225ENST00000483495 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
CPNE1-225ENST00000483495 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
CPNE1-225ENST00000483495 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
CPNE1-225ENST00000483495 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
CPNE1-225ENST00000483495 SULT6B1Q6IMI4 303 aa17.1■□□□□ 0.33
CPNE1-225ENST00000483495 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
CPNE1-225ENST00000483495 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
CPNE1-225ENST00000483495 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
CPNE1-225ENST00000483495 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
CPNE1-225ENST00000483495 SOX12O15370 315 aa17.09■□□□□ 0.33
CPNE1-225ENST00000483495 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
CPNE1-225ENST00000483495 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-225ENST00000483495 IFT57Q9NWB7 429 aa17.09■□□□□ 0.33
CPNE1-225ENST00000483495 KDRP35968 1356 aa17.09■□□□□ 0.33
CPNE1-225ENST00000483495 CANXP27824 592 aaKnown RBP17.08■□□□□ 0.33
CPNE1-225ENST00000483495 C14orf37Q86TY3 774 aa17.08■□□□□ 0.33
CPNE1-225ENST00000483495 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
CPNE1-225ENST00000483495 AMPHP49418 695 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 IGSF1Q8N6C5 1336 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 RTL1A6NKG5 1358 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-225ENST00000483495 GNAI1P63096 354 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 AAMPQ13685 434 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 ZNF428Q96B54 188 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
CPNE1-225ENST00000483495 PSME1Q06323 249 aa17.06■□□□□ 0.32
CPNE1-225ENST00000483495 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-225ENST00000483495 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
CPNE1-225ENST00000483495 HOXC9P31274 260 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-225ENST00000483495 PANK1Q8TE04 598 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 NFAT5O94916 1531 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
CPNE1-225ENST00000483495 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
CPNE1-225ENST00000483495 DCCP43146 1447 aa17.04■□□□□ 0.32
CPNE1-225ENST00000483495 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
CPNE1-225ENST00000483495 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
CPNE1-225ENST00000483495 ORAI2Q96SN7 254 aa17.04■□□□□ 0.32
CPNE1-225ENST00000483495 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-225ENST00000483495 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
CPNE1-225ENST00000483495 EYA1Q99502 592 aa17.03■□□□□ 0.32
CPNE1-225ENST00000483495 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
CPNE1-225ENST00000483495 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
CPNE1-225ENST00000483495 COG6Q9Y2V7 657 aa17.03■□□□□ 0.32
CPNE1-225ENST00000483495 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
CPNE1-225ENST00000483495 MS4A1P11836 297 aa17.02■□□□□ 0.32
CPNE1-225ENST00000483495 RLBP1P12271 317 aa17.02■□□□□ 0.32
CPNE1-225ENST00000483495 MBIPQ9NS73 344 aa17.02■□□□□ 0.32
CPNE1-225ENST00000483495 MST1RQ04912 1400 aa17.02■□□□□ 0.31
CPNE1-225ENST00000483495 FAM83GA6ND36 823 aa17.01■□□□□ 0.31
CPNE1-225ENST00000483495 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
CPNE1-225ENST00000483495 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
CPNE1-225ENST00000483495 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
CPNE1-225ENST00000483495 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
CPNE1-225ENST00000483495 STRCP1A6NGW2 1772 aa17.01■□□□□ 0.31
CPNE1-225ENST00000483495 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
CPNE1-225ENST00000483495 FOXO3O43524 673 aa17■□□□□ 0.31
CPNE1-225ENST00000483495 IP6K1Q92551 441 aa17■□□□□ 0.31
CPNE1-225ENST00000483495 TNNQ9UQP3 1299 aa17■□□□□ 0.31
CPNE1-225ENST00000483495 KIF16BQ96L93 1317 aa17■□□□□ 0.31
CPNE1-225ENST00000483495 SLIT3O75094 1523 aa17■□□□□ 0.31
CPNE1-225ENST00000483495 TRPM3Q9HCF6 1732 aaPredicted RBP17■□□□□ 0.31
CPNE1-225ENST00000483495 VAMP4O75379 141 aa16.99■□□□□ 0.31
CPNE1-225ENST00000483495 DZIP1LQ8IYY4 767 aaKnown RBP16.99■□□□□ 0.31
CPNE1-225ENST00000483495 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
CPNE1-225ENST00000483495 USP19O94966 1318 aa16.98■□□□□ 0.31
CPNE1-225ENST00000483495 TRIM27P14373 513 aa16.98■□□□□ 0.31
CPNE1-225ENST00000483495 HSPA2P54652 639 aa16.98■□□□□ 0.31
CPNE1-225ENST00000483495 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
CPNE1-225ENST00000483495 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
CPNE1-225ENST00000483495 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
CPNE1-225ENST00000483495 LMTK3Q96Q04 1460 aa16.98■□□□□ 0.31
CPNE1-225ENST00000483495 LTN1O94822 1766 aa16.97■□□□□ 0.31
CPNE1-225ENST00000483495 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
CPNE1-225ENST00000483495 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
CPNE1-225ENST00000483495 CRB1P82279 1406 aa16.97■□□□□ 0.31
CPNE1-225ENST00000483495 CHL1O00533 1208 aa16.97■□□□□ 0.31
CPNE1-225ENST00000483495 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
CPNE1-225ENST00000483495 ATF3P18847 181 aa16.97■□□□□ 0.31
CPNE1-225ENST00000483495 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
CPNE1-225ENST00000483495 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
CPNE1-225ENST00000483495 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
CPNE1-225ENST00000483495 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
CPNE1-225ENST00000483495 FTSJ3Q8IY81 847 aaKnown RBP16.95■□□□□ 0.3
CPNE1-225ENST00000483495 MCM10Q7L590 875 aa16.95■□□□□ 0.3
CPNE1-225ENST00000483495 GCP02774 474 aa16.94■□□□□ 0.3
CPNE1-225ENST00000483495 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-225ENST00000483495 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
CPNE1-225ENST00000483495 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
CPNE1-225ENST00000483495 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
CPNE1-225ENST00000483495 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
CPNE1-225ENST00000483495 ARHGAP45Q92619 1136 aa16.94■□□□□ 0.3
CPNE1-225ENST00000483495 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
CPNE1-225ENST00000483495 IGHDP01880 384 aa16.93■□□□□ 0.3
CPNE1-225ENST00000483495 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-225ENST00000483495 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms