RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 LTN1O94822 1766 aa13.58□□□□□ -0.23
APTX-225ENST00000482687 USP35Q9P2H5 1018 aa13.58□□□□□ -0.24
APTX-225ENST00000482687 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
APTX-225ENST00000482687 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
APTX-225ENST00000482687 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
APTX-225ENST00000482687 AMPHP49418 695 aa13.57□□□□□ -0.24
APTX-225ENST00000482687 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
APTX-225ENST00000482687 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
APTX-225ENST00000482687 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
APTX-225ENST00000482687 ZNF521Q96K83 1311 aa13.56□□□□□ -0.24
APTX-225ENST00000482687 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
APTX-225ENST00000482687 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
APTX-225ENST00000482687 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
APTX-225ENST00000482687 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
APTX-225ENST00000482687 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
APTX-225ENST00000482687 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
APTX-225ENST00000482687 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 ALS2Q96Q42 1657 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
APTX-225ENST00000482687 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
APTX-225ENST00000482687 NFAT5O94916 1531 aa13.53□□□□□ -0.24
APTX-225ENST00000482687 FCHSD2O94868 740 aa13.53□□□□□ -0.24
APTX-225ENST00000482687 HOXC9P31274 260 aa13.53□□□□□ -0.24
APTX-225ENST00000482687 FLT4P35916 1363 aa13.53□□□□□ -0.24
APTX-225ENST00000482687 TMPOP42166 694 aaKnown RBP13.53□□□□□ -0.24
APTX-225ENST00000482687 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
APTX-225ENST00000482687 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
APTX-225ENST00000482687 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
APTX-225ENST00000482687 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
APTX-225ENST00000482687 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
APTX-225ENST00000482687 NPHP3Q7Z494 1330 aa13.51□□□□□ -0.25
APTX-225ENST00000482687 GCP02774 474 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 RIPK4P57078 832 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 DUSP27Q5VZP5 1158 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 CABLES1Q8TDN4 633 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
APTX-225ENST00000482687 MED1Q15648 1581 aaPredicted RBP13.5□□□□□ -0.25
APTX-225ENST00000482687 PXDNQ92626 1479 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.5□□□□□ -0.25
APTX-225ENST00000482687 TRIM35Q9UPQ4 493 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 SLIT3O75094 1523 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 RGPD2P0DJD1 1756 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 RGPD5Q99666 1765 aa13.5□□□□□ -0.25
APTX-225ENST00000482687 NEFMP07197 916 aa13.49□□□□□ -0.25
APTX-225ENST00000482687 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
APTX-225ENST00000482687 KCNH5Q8NCM2 988 aa13.49□□□□□ -0.25
APTX-225ENST00000482687 RCAN3Q9UKA8 241 aa13.49□□□□□ -0.25
APTX-225ENST00000482687 EYA1Q99502 592 aa13.48□□□□□ -0.25
APTX-225ENST00000482687 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
APTX-225ENST00000482687 USP19O94966 1318 aa13.48□□□□□ -0.25
APTX-225ENST00000482687 E9PSI1 815 aa13.48□□□□□ -0.25
APTX-225ENST00000482687 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
APTX-225ENST00000482687 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
APTX-225ENST00000482687 PHRF1Q9P1Y6 1649 aaKnown RBP13.48□□□□□ -0.25
APTX-225ENST00000482687 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
APTX-225ENST00000482687 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
APTX-225ENST00000482687 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
APTX-225ENST00000482687 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
APTX-225ENST00000482687 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
APTX-225ENST00000482687 IP6K1Q92551 441 aa13.47□□□□□ -0.25
APTX-225ENST00000482687 SPATA31A3Q5VYP0 1347 aa13.47□□□□□ -0.25
APTX-225ENST00000482687 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
APTX-225ENST00000482687 THUMPD2Q9BTF0 503 aaKnown RBP13.46□□□□□ -0.25
APTX-225ENST00000482687 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.26
APTX-225ENST00000482687 WDR63Q8IWG1 891 aa13.46□□□□□ -0.26
APTX-225ENST00000482687 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.26
APTX-225ENST00000482687 ARHGEF10O15013 1369 aa13.46□□□□□ -0.26
APTX-225ENST00000482687 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
APTX-225ENST00000482687 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 LRRC59Q96AG4 307 aaKnown RBP13.44□□□□□ -0.26
APTX-225ENST00000482687 KIF24Q5T7B8 1368 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 NHSL1Q5SYE7 1610 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 PLIN1O60240 522 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 TSR2Q969E8 191 aaKnown RBP13.44□□□□□ -0.26
APTX-225ENST00000482687 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
APTX-225ENST00000482687 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
APTX-225ENST00000482687 CHRNA2Q15822 529 aa13.43□□□□□ -0.26
APTX-225ENST00000482687 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
APTX-225ENST00000482687 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
APTX-225ENST00000482687 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
APTX-225ENST00000482687 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
APTX-225ENST00000482687 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
APTX-225ENST00000482687 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
APTX-225ENST00000482687 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
APTX-225ENST00000482687 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
APTX-225ENST00000482687 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
APTX-225ENST00000482687 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
APTX-225ENST00000482687 COL18A1P39060 1754 aa13.4□□□□□ -0.26
APTX-225ENST00000482687 MCM10Q7L590 875 aa13.4□□□□□ -0.26
APTX-225ENST00000482687 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
APTX-225ENST00000482687 KDRP35968 1356 aa13.39□□□□□ -0.27
APTX-225ENST00000482687 KIAA0232Q92628 1395 aa13.39□□□□□ -0.27
APTX-225ENST00000482687 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms