RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 CPDO75976 1380 aa12.34□□□□□ -0.43
HDGF-208ENST00000482651 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
HDGF-208ENST00000482651 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
HDGF-208ENST00000482651 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.43
HDGF-208ENST00000482651 GCP02774 474 aa12.33□□□□□ -0.44
HDGF-208ENST00000482651 NRKQ7Z2Y5 1582 aa12.33□□□□□ -0.44
HDGF-208ENST00000482651 NRAPQ86VF7 1730 aa12.33□□□□□ -0.44
HDGF-208ENST00000482651 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
HDGF-208ENST00000482651 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
HDGF-208ENST00000482651 CPSF1Q10570 1443 aaKnown RBP12.32□□□□□ -0.44
HDGF-208ENST00000482651 NLRP6P59044 892 aa12.32□□□□□ -0.44
HDGF-208ENST00000482651 MIER1Q8N108 512 aa12.32□□□□□ -0.44
HDGF-208ENST00000482651 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
HDGF-208ENST00000482651 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
HDGF-208ENST00000482651 FAM98CQ17RN3 349 aaKnown RBP12.31□□□□□ -0.44
HDGF-208ENST00000482651 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
HDGF-208ENST00000482651 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
HDGF-208ENST00000482651 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
HDGF-208ENST00000482651 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
HDGF-208ENST00000482651 A0A0G2JS52 829 aa12.3□□□□□ -0.44
HDGF-208ENST00000482651 MYT1Q01538 1121 aa12.3□□□□□ -0.44
HDGF-208ENST00000482651 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
HDGF-208ENST00000482651 TESK2Q96S53 571 aa12.3□□□□□ -0.44
HDGF-208ENST00000482651 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
HDGF-208ENST00000482651 SLIT3O75094 1523 aa12.3□□□□□ -0.44
HDGF-208ENST00000482651 ST20-MTHFSA0A0A6YYL1 179 aa12.29□□□□□ -0.44
HDGF-208ENST00000482651 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
HDGF-208ENST00000482651 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
HDGF-208ENST00000482651 EVA1CP58658 441 aa12.28□□□□□ -0.44
HDGF-208ENST00000482651 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
HDGF-208ENST00000482651 AATKQ6ZMQ8 1374 aa12.28□□□□□ -0.44
HDGF-208ENST00000482651 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
HDGF-208ENST00000482651 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
HDGF-208ENST00000482651 PIK3C2AO00443 1686 aa12.27□□□□□ -0.45
HDGF-208ENST00000482651 CAMTA1Q9Y6Y1 1673 aa12.27□□□□□ -0.45
HDGF-208ENST00000482651 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.45
HDGF-208ENST00000482651 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
HDGF-208ENST00000482651 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
HDGF-208ENST00000482651 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
HDGF-208ENST00000482651 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
HDGF-208ENST00000482651 SLC12A5Q9H2X9 1139 aa12.26□□□□□ -0.45
HDGF-208ENST00000482651 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
HDGF-208ENST00000482651 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
HDGF-208ENST00000482651 USP47Q96K76 1375 aa12.26□□□□□ -0.45
HDGF-208ENST00000482651 NINLQ9Y2I6 1382 aa12.26□□□□□ -0.45
HDGF-208ENST00000482651 EP400Q96L91 3159 aa12.25□□□□□ -0.45
HDGF-208ENST00000482651 ZBTB7CA1YPR0 619 aa12.25□□□□□ -0.45
HDGF-208ENST00000482651 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
HDGF-208ENST00000482651 EDC4Q6P2E9 1401 aaKnown RBP12.25□□□□□ -0.45
HDGF-208ENST00000482651 COL5A2P05997 1499 aaPredicted RBP12.25□□□□□ -0.45
HDGF-208ENST00000482651 THSD7AQ9UPZ6 1657 aa12.25□□□□□ -0.45
HDGF-208ENST00000482651 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
HDGF-208ENST00000482651 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
HDGF-208ENST00000482651 ARHGEF25Q86VW2 580 aa12.24□□□□□ -0.45
HDGF-208ENST00000482651 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDGF-208ENST00000482651 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
HDGF-208ENST00000482651 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
HDGF-208ENST00000482651 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
HDGF-208ENST00000482651 TMF1P82094 1093 aa12.23□□□□□ -0.45
HDGF-208ENST00000482651 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
HDGF-208ENST00000482651 NME9Q86XW9 330 aa12.23□□□□□ -0.45
HDGF-208ENST00000482651 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
HDGF-208ENST00000482651 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
HDGF-208ENST00000482651 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
HDGF-208ENST00000482651 NFAT5O94916 1531 aa12.22□□□□□ -0.45
HDGF-208ENST00000482651 CRB1P82279 1406 aa12.22□□□□□ -0.45
HDGF-208ENST00000482651 SOX12O15370 315 aa12.22□□□□□ -0.45
HDGF-208ENST00000482651 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
HDGF-208ENST00000482651 WDR17Q8IZU2 1322 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 FAM182BQ5T319 152 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.464e-6■■■■□ 26
HDGF-208ENST00000482651 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 ABCC6O95255 1503 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 OVOS2A0A0J9YW53 1432 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 OVOS2Q6IE36 1432 aa12.2□□□□□ -0.46
HDGF-208ENST00000482651 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
HDGF-208ENST00000482651 PDE3BQ13370 1112 aa12.19□□□□□ -0.46
HDGF-208ENST00000482651 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
HDGF-208ENST00000482651 TOM1L2Q6ZVM7 507 aa12.19□□□□□ -0.46
HDGF-208ENST00000482651 USP54Q70EL1 1684 aa12.19□□□□□ -0.46
HDGF-208ENST00000482651 COL18A1P39060 1754 aa12.18□□□□□ -0.46
HDGF-208ENST00000482651 BAG6P46379 1132 aa12.18□□□□□ -0.46
HDGF-208ENST00000482651 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
HDGF-208ENST00000482651 CARD10Q9BWT7 1032 aa12.17□□□□□ -0.46
HDGF-208ENST00000482651 COG3Q96JB2 828 aa12.16□□□□□ -0.46
HDGF-208ENST00000482651 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
HDGF-208ENST00000482651 DISP2A7MBM2 1401 aa12.16□□□□□ -0.46
HDGF-208ENST00000482651 ERBB3P21860 1342 aa12.15□□□□□ -0.46
HDGF-208ENST00000482651 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
HDGF-208ENST00000482651 CCDC7Q96M83 1385 aa12.15□□□□□ -0.46
HDGF-208ENST00000482651 TRIM37O94972 964 aa12.14□□□□□ -0.47
HDGF-208ENST00000482651 DDB1Q16531 1140 aa12.14□□□□□ -0.47
HDGF-208ENST00000482651 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
HDGF-208ENST00000482651 EN1Q05925 392 aaPredicted RBP12.13□□□□□ -0.47
HDGF-208ENST00000482651 IP6K1Q92551 441 aa12.13□□□□□ -0.47
HDGF-208ENST00000482651 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
HDGF-208ENST00000482651 RGPD1P0DJD0 1748 aa12.12□□□□□ -0.47
HDGF-208ENST00000482651 FYB1O15117 783 aa12.12□□□□□ -0.47
HDGF-208ENST00000482651 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms