RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CCDC125Q86Z20 511 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 EPAS1Q99814 870 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 POLR3EQ9NVU0 708 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 AKNAQ7Z591 1439 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 TRPM1Q7Z4N2 1603 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 SETBP1Q9Y6X0 1596 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 EHBP1L1Q8N3D4 1523 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 CASKIN1Q8WXD9 1431 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 HOXB3P14651 431 aaPredicted RBP5.12□□□□□ -1.59
SMC6-208ENST00000481708 CCDC27Q2M243 656 aa5.12□□□□□ -1.59
SMC6-208ENST00000481708 A2ML1A8K2U0 1454 aa5.11□□□□□ -1.59
SMC6-208ENST00000481708 DENND4BO75064 1496 aaPredicted RBP5.11□□□□□ -1.59
SMC6-208ENST00000481708 FOSBP53539 338 aa5.11□□□□□ -1.59
SMC6-208ENST00000481708 DUOX2Q9NRD8 1548 aa5.11□□□□□ -1.59
SMC6-208ENST00000481708 PLCH1Q4KWH8 1693 aa5.11□□□□□ -1.59
SMC6-208ENST00000481708 DNAJC14Q6Y2X3 702 aaPredicted RBP5.11□□□□□ -1.59
SMC6-208ENST00000481708 ADGRL2O95490 1459 aa5.11□□□□□ -1.59
SMC6-208ENST00000481708 NWD2Q9ULI1 1742 aa5.1□□□□□ -1.59
SMC6-208ENST00000481708 SPDYE5A6NIY4 337 aa5.1□□□□□ -1.59
SMC6-208ENST00000481708 KCNA1Q09470 495 aa5.1□□□□□ -1.59
SMC6-208ENST00000481708 TYW1BQ6NUM6 668 aa5.1□□□□□ -1.59
SMC6-208ENST00000481708 NUDT7P0C024 238 aa5.1□□□□□ -1.59
SMC6-208ENST00000481708 RSPH4AQ5TD94 716 aa5.1□□□□□ -1.59
SMC6-208ENST00000481708 TNS1Q9HBL0 1735 aaKnown RBP5.1□□□□□ -1.59
SMC6-208ENST00000481708 RBM47A0AV96 593 aaKnown RBP5.09□□□□□ -1.59
SMC6-208ENST00000481708 MDM2Q00987 491 aaPredicted RBP5.09□□□□□ -1.59
SMC6-208ENST00000481708 MYSM1Q5VVJ2 828 aa5.09□□□□□ -1.59
SMC6-208ENST00000481708 ARSIQ5FYB1 569 aa5.09□□□□□ -1.59
SMC6-208ENST00000481708 METTL3Q86U44 580 aaKnown RBP5.09□□□□□ -1.59
SMC6-208ENST00000481708 TBC1D2BQ9UPU7 963 aa5.09□□□□□ -1.59
SMC6-208ENST00000481708 NCOA3Q9Y6Q9 1424 aa5.09□□□□□ -1.59
SMC6-208ENST00000481708 C6orf132Q5T0Z8 1188 aa5.09□□□□□ -1.6
SMC6-208ENST00000481708 PADI6Q6TGC4 694 aa5.09□□□□□ -1.6
SMC6-208ENST00000481708 ADAM33Q9BZ11 813 aa5.09□□□□□ -1.6
SMC6-208ENST00000481708 TOPAZ1Q8N9V7 1692 aa5.09□□□□□ -1.6
SMC6-208ENST00000481708 ADGRB3O60242 1522 aa5.09□□□□□ -1.6
SMC6-208ENST00000481708 NLRP1Q9C000 1473 aa5.09□□□□□ -1.6
SMC6-208ENST00000481708 KIF1AQ12756 1690 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 YEATS2Q9ULM3 1422 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 PPLO60437 1756 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 PPP1R15AO75807 674 aaPredicted RBP5.08□□□□□ -1.6
SMC6-208ENST00000481708 RFX1P22670 979 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 RFC5P40937 340 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 GPR153Q6NV75 609 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 FBXO41Q8TF61 875 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 CWC22Q9HCG8 908 aaKnown RBP5.08□□□□□ -1.6
SMC6-208ENST00000481708 SMARCA5O60264 1052 aaPredicted RBP5.08□□□□□ -1.6
SMC6-208ENST00000481708 PHLDB3Q6NSJ2 640 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 ZNF454Q8N9F8 522 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 SIRT1Q96EB6 747 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 TRPM3Q9HCF6 1732 aaPredicted RBP5.08□□□□□ -1.6
SMC6-208ENST00000481708 MST1RQ04912 1400 aa5.08□□□□□ -1.6
SMC6-208ENST00000481708 ADGRB2O60241 1585 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 TTC13Q8NBP0 860 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 MRRFQ96E11 262 aaKnown RBP5.07□□□□□ -1.6
SMC6-208ENST00000481708 GPCPD1Q9NPB8 672 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 ADGRG1Q9Y653 693 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 USP32Q8NFA0 1604 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 PBXIP1Q96AQ6 731 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 CALR3Q96L12 384 aaKnown RBP5.07□□□□□ -1.6
SMC6-208ENST00000481708 TROQ12816 1431 aaPredicted RBP5.07□□□□□ -1.6
SMC6-208ENST00000481708 ZDHHC16Q969W1 377 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 UCN2Q96RP3 112 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 LIMD1Q9UGP4 676 aa5.07□□□□□ -1.6
SMC6-208ENST00000481708 CICQ96RK0 1608 aaPredicted RBP5.07□□□□□ -1.6
SMC6-208ENST00000481708 E9PCH4 1651 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 CYB5RLQ6IPT4 315 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 PXYLP1Q8TE99 480 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 SLAIN2Q9P270 581 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 FAM198AQ9UFP1 575 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 CEP162Q5TB80 1403 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 HMGB1P09429 215 aaKnown RBP5.06□□□□□ -1.6
SMC6-208ENST00000481708 CLCN1P35523 988 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 BEGAINQ9BUH8 593 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 C3orf80F5H4A9 247 aa5.06□□□□□ -1.6
SMC6-208ENST00000481708 FAM217BQ9NTX9 383 aaPredicted RBP5.06□□□□□ -1.6
SMC6-208ENST00000481708 NKTRP30414 1462 aaKnown RBP5.06□□□□□ -1.6
SMC6-208ENST00000481708 FGD6Q6ZV73 1430 aa5.05□□□□□ -1.6
SMC6-208ENST00000481708 SSTR3P32745 418 aaPredicted RBP5.05□□□□□ -1.6
SMC6-208ENST00000481708 PEAK1Q9H792 1746 aa5.05□□□□□ -1.6
SMC6-208ENST00000481708 COL9A1P20849 921 aa5.05□□□□□ -1.6
SMC6-208ENST00000481708 CHMP7Q8WUX9 453 aaPredicted RBP5.05□□□□□ -1.6
SMC6-208ENST00000481708 TAGLNQ01995 201 aaKnown RBP5.05□□□□□ -1.6
SMC6-208ENST00000481708 LHX6Q9UPM6 363 aa5.05□□□□□ -1.6
SMC6-208ENST00000481708 PHRF1Q9P1Y6 1649 aaKnown RBP5.05□□□□□ -1.6
SMC6-208ENST00000481708 CASZ1Q86V15 1759 aa5.05□□□□□ -1.6
SMC6-208ENST00000481708 ALS2Q96Q42 1657 aa5.04□□□□□ -1.6
SMC6-208ENST00000481708 THSD7AQ9UPZ6 1657 aa5.04□□□□□ -1.6
SMC6-208ENST00000481708 TRAPPC8Q9Y2L5 1435 aa5.04□□□□□ -1.6
SMC6-208ENST00000481708 ROBO1Q9Y6N7 1651 aa5.04□□□□□ -1.6
SMC6-208ENST00000481708 CDCA7LQ96GN5 454 aa5.04□□□□□ -1.6
SMC6-208ENST00000481708 RPRD2Q5VT52 1461 aaKnown RBP5.04□□□□□ -1.6
SMC6-208ENST00000481708 ZNF16P17020 682 aaPredicted RBP5.03□□□□□ -1.6
SMC6-208ENST00000481708 DOK7Q18PE1 504 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 CERKQ8TCT0 537 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 RBM27Q9P2N5 1060 aaKnown RBP5.03□□□□□ -1.6
SMC6-208ENST00000481708 USTQ9Y2C2 406 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 LRRC9Q6ZRR7 1453 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 SCNN1AP37088 669 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 PRSS12P56730 875 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms