RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.64
ABCF1-206ENST00000479542 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
ABCF1-206ENST00000479542 CARD10Q9BWT7 1032 aa19.07■□□□□ 0.64
ABCF1-206ENST00000479542 BCL11BQ9C0K0 894 aaPredicted RBP19.07■□□□□ 0.64
ABCF1-206ENST00000479542 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
ABCF1-206ENST00000479542 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
ABCF1-206ENST00000479542 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
ABCF1-206ENST00000479542 ABCC6O95255 1503 aa19.05■□□□□ 0.64
ABCF1-206ENST00000479542 SPON1Q9HCB6 807 aa19.05■□□□□ 0.64
ABCF1-206ENST00000479542 ROCK2O75116 1388 aaKnown RBP19.05■□□□□ 0.64
ABCF1-206ENST00000479542 SBF2Q86WG5 1849 aa19.03■□□□□ 0.64
ABCF1-206ENST00000479542 KCNQ2O43526 872 aa19.03■□□□□ 0.64
ABCF1-206ENST00000479542 AKAP12Q02952 1782 aa19.02■□□□□ 0.64
ABCF1-206ENST00000479542 LRRC37A3O60309 1634 aa19.02■□□□□ 0.64
ABCF1-206ENST00000479542 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
ABCF1-206ENST00000479542 MARCH10Q8NA82 808 aaPredicted RBP19.01■□□□□ 0.63
ABCF1-206ENST00000479542 PUS7Q96PZ0 661 aaKnown RBP19.01■□□□□ 0.63
ABCF1-206ENST00000479542 SIN3AQ96ST3 1273 aa19.01■□□□□ 0.63
ABCF1-206ENST00000479542 CCDC7Q96M83 1385 aa19.01■□□□□ 0.63
ABCF1-206ENST00000479542 EXOC5O00471 708 aa19■□□□□ 0.63
ABCF1-206ENST00000479542 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
ABCF1-206ENST00000479542 NINLQ9Y2I6 1382 aa18.99■□□□□ 0.63
ABCF1-206ENST00000479542 NFAT5O94916 1531 aa18.99■□□□□ 0.63
ABCF1-206ENST00000479542 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
ABCF1-206ENST00000479542 PROM2Q8N271 834 aa18.98■□□□□ 0.63
ABCF1-206ENST00000479542 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
ABCF1-206ENST00000479542 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
ABCF1-206ENST00000479542 CSB-PGBD3P0DP91 1061 aa18.95■□□□□ 0.62
ABCF1-206ENST00000479542 ERBB3P21860 1342 aa18.94■□□□□ 0.62
ABCF1-206ENST00000479542 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
ABCF1-206ENST00000479542 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
ABCF1-206ENST00000479542 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
ABCF1-206ENST00000479542 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
ABCF1-206ENST00000479542 PPP1R1BQ9UD71 204 aaPredicted RBP18.93■□□□□ 0.62
ABCF1-206ENST00000479542 RGPD5Q99666 1765 aa18.93■□□□□ 0.62
ABCF1-206ENST00000479542 CD163L1Q9NR16 1453 aa18.92■□□□□ 0.62
ABCF1-206ENST00000479542 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
ABCF1-206ENST00000479542 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
ABCF1-206ENST00000479542 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
ABCF1-206ENST00000479542 TXNRD1Q16881 649 aa18.91■□□□□ 0.62
ABCF1-206ENST00000479542 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
ABCF1-206ENST00000479542 CASZ1Q86V15 1759 aa18.91■□□□□ 0.62
ABCF1-206ENST00000479542 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
ABCF1-206ENST00000479542 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
ABCF1-206ENST00000479542 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
ABCF1-206ENST00000479542 TERF2IPQ9NYB0 399 aa18.89■□□□□ 0.61
ABCF1-206ENST00000479542 SOX12O15370 315 aa18.88■□□□□ 0.61
ABCF1-206ENST00000479542 IL2RBP14784 551 aa18.88■□□□□ 0.61
ABCF1-206ENST00000479542 YY1P25490 414 aa18.88■□□□□ 0.61
ABCF1-206ENST00000479542 STK32BQ9NY57 414 aa18.88■□□□□ 0.61
ABCF1-206ENST00000479542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
ABCF1-206ENST00000479542 PTGER2P43116 358 aa18.86■□□□□ 0.61
ABCF1-206ENST00000479542 NME9Q86XW9 330 aa18.86■□□□□ 0.61
ABCF1-206ENST00000479542 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
ABCF1-206ENST00000479542 NLRP2Q9NX02 1062 aa18.85■□□□□ 0.61
ABCF1-206ENST00000479542 NHSQ6T4R5 1651 aa18.85■□□□□ 0.61
ABCF1-206ENST00000479542 ANKRD24Q8TF21 1146 aa18.84■□□□□ 0.61
ABCF1-206ENST00000479542 IP6K1Q92551 441 aa18.84■□□□□ 0.61
ABCF1-206ENST00000479542 MTFR1LQ9H019 292 aa18.84■□□□□ 0.61
ABCF1-206ENST00000479542 TMC1Q8TDI8 760 aa18.83■□□□□ 0.6
ABCF1-206ENST00000479542 SGIP1Q9BQI5 828 aa18.83■□□□□ 0.6
ABCF1-206ENST00000479542 PDGFDQ9GZP0 370 aaPredicted RBP18.82■□□□□ 0.6
ABCF1-206ENST00000479542 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
ABCF1-206ENST00000479542 LTN1O94822 1766 aa18.81■□□□□ 0.6
ABCF1-206ENST00000479542 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
ABCF1-206ENST00000479542 TESK2Q96S53 571 aa18.8■□□□□ 0.6
ABCF1-206ENST00000479542 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
ABCF1-206ENST00000479542 SLC16A10Q8TF71 515 aa18.79■□□□□ 0.6
ABCF1-206ENST00000479542 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
ABCF1-206ENST00000479542 MAP3K5Q99683 1374 aa18.79■□□□□ 0.6
ABCF1-206ENST00000479542 SYT17Q9BSW7 474 aa18.78■□□□□ 0.6
ABCF1-206ENST00000479542 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
ABCF1-206ENST00000479542 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.6
ABCF1-206ENST00000479542 ACSBG1Q96GR2 724 aa18.77■□□□□ 0.6
ABCF1-206ENST00000479542 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
ABCF1-206ENST00000479542 COG3Q96JB2 828 aa18.75■□□□□ 0.59
ABCF1-206ENST00000479542 FHDC1Q9C0D6 1143 aaPredicted RBP18.75■□□□□ 0.59
ABCF1-206ENST00000479542 UTRNP46939 3433 aa18.74■□□□□ 0.59
ABCF1-206ENST00000479542 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
ABCF1-206ENST00000479542 LRRC4BQ9NT99 713 aa18.74■□□□□ 0.59
ABCF1-206ENST00000479542 BTAF1O14981 1849 aa18.74■□□□□ 0.59
ABCF1-206ENST00000479542 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
ABCF1-206ENST00000479542 MYOM1P52179 1685 aa18.73■□□□□ 0.59
ABCF1-206ENST00000479542 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
ABCF1-206ENST00000479542 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
ABCF1-206ENST00000479542 ARXQ96QS3 562 aa18.73■□□□□ 0.59
ABCF1-206ENST00000479542 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
ABCF1-206ENST00000479542 RTL1A6NKG5 1358 aa18.72■□□□□ 0.59
ABCF1-206ENST00000479542 ANKRD36BQ8N2N9 1353 aa18.72■□□□□ 0.59
ABCF1-206ENST00000479542 HOXC9P31274 260 aa18.72■□□□□ 0.59
ABCF1-206ENST00000479542 AMPHP49418 695 aa18.7■□□□□ 0.58
ABCF1-206ENST00000479542 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
ABCF1-206ENST00000479542 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
ABCF1-206ENST00000479542 DDX54Q8TDD1 881 aaKnown RBP18.7■□□□□ 0.58
ABCF1-206ENST00000479542 KAT6BQ8WYB5 2073 aa18.69■□□□□ 0.58
ABCF1-206ENST00000479542 ZNF827Q17R98 1081 aa18.69■□□□□ 0.58
ABCF1-206ENST00000479542 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
ABCF1-206ENST00000479542 COL24A1Q17RW2 1714 aa18.68■□□□□ 0.58
ABCF1-206ENST00000479542 FYB1O15117 783 aa18.67■□□□□ 0.58
ABCF1-206ENST00000479542 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms