RNA–Protein interactions for RNA: ENST00000479344.1

USP21-204, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 2

Gene USP21, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-204ENST00000479344 PCGF6Q9BYE7 350 aa29.74■■■□□ 2.35
USP21-204ENST00000479344 THRAP3Q9Y2W1 955 aaKnown RBP29.74■■■□□ 2.35
USP21-204ENST00000479344 HDGFL2Q7Z4V5 671 aaPredicted RBP29.72■■■□□ 2.35
USP21-204ENST00000479344 WDR17Q8IZU2 1322 aa29.71■■■□□ 2.35
USP21-204ENST00000479344 EDC4Q6P2E9 1401 aaKnown RBP29.71■■■□□ 2.35
USP21-204ENST00000479344 TRIM37O94972 964 aa29.71■■■□□ 2.35
USP21-204ENST00000479344 BAG6P46379 1132 aa29.71■■■□□ 2.35
USP21-204ENST00000479344 PDE3BQ13370 1112 aa29.71■■■□□ 2.35
USP21-204ENST00000479344 FAM196AQ6ZSG2 479 aa29.71■■■□□ 2.35
USP21-204ENST00000479344 USP47Q96K76 1375 aa29.71■■■□□ 2.35
USP21-204ENST00000479344 TOM1L2Q6ZVM7 507 aa29.7■■■□□ 2.35
USP21-204ENST00000479344 WNK3Q9BYP7 1800 aa29.69■■■□□ 2.34
USP21-204ENST00000479344 LRRC37A3O60309 1634 aa29.69■■■□□ 2.34
USP21-204ENST00000479344 TERF2IPQ9NYB0 399 aa29.68■■■□□ 2.34
USP21-204ENST00000479344 DISP2A7MBM2 1401 aa29.68■■■□□ 2.34
USP21-204ENST00000479344 LTN1O94822 1766 aa29.67■■■□□ 2.34
USP21-204ENST00000479344 PEAK1Q9H792 1746 aa29.66■■■□□ 2.34
USP21-204ENST00000479344 OVOS2A0A0J9YW53 1432 aa29.65■■■□□ 2.34
USP21-204ENST00000479344 OVOS2Q6IE36 1432 aa29.65■■■□□ 2.34
USP21-204ENST00000479344 EZH2Q15910 746 aaKnown RBP29.65■■■□□ 2.34
USP21-204ENST00000479344 ABCC6O95255 1503 aa29.62■■■□□ 2.33
USP21-204ENST00000479344 CAMKK2Q96RR4 588 aa29.62■■■□□ 2.33
USP21-204ENST00000479344 CARD10Q9BWT7 1032 aa29.61■■■□□ 2.33
USP21-204ENST00000479344 NINLQ9Y2I6 1382 aa29.61■■■□□ 2.33
USP21-204ENST00000479344 PSDA5PKW4 1024 aaPredicted RBP29.6■■■□□ 2.33
USP21-204ENST00000479344 CSB-PGBD3P0DP91 1061 aa29.6■■■□□ 2.33
USP21-204ENST00000479344 CLSPNQ9HAW4 1339 aa29.6■■■□□ 2.33
USP21-204ENST00000479344 APBA3O96018 575 aa29.59■■■□□ 2.33
USP21-204ENST00000479344 FBLN1P23142 703 aa29.58■■■□□ 2.33
USP21-204ENST00000479344 DDB1Q16531 1140 aa29.58■■■□□ 2.33
USP21-204ENST00000479344 TIMELESSQ9UNS1 1208 aa29.58■■■□□ 2.33
USP21-204ENST00000479344 SBF2Q86WG5 1849 aa29.57■■■□□ 2.32
USP21-204ENST00000479344 TMF1P82094 1093 aa29.57■■■□□ 2.32
USP21-204ENST00000479344 ANKRD36BQ8N2N9 1353 aa29.56■■■□□ 2.32
USP21-204ENST00000479344 ERBB3P21860 1342 aa29.56■■■□□ 2.32
USP21-204ENST00000479344 SLC24A1O60721 1099 aa29.56■■■□□ 2.32
USP21-204ENST00000479344 PTF1AQ7RTS3 328 aa29.56■■■□□ 2.32
USP21-204ENST00000479344 MARCH10Q8NA82 808 aaPredicted RBP29.56■■■□□ 2.32
USP21-204ENST00000479344 OVOS2A0A0G2JMS6 1433 aa29.54■■■□□ 2.32
USP21-204ENST00000479344 RREB1Q92766 1687 aa29.53■■■□□ 2.32
USP21-204ENST00000479344 CCDC7Q96M83 1385 aa29.52■■■□□ 2.32
USP21-204ENST00000479344 MYOM1P52179 1685 aa29.51■■■□□ 2.31
USP21-204ENST00000479344 ANKRD24Q8TF21 1146 aa29.51■■■□□ 2.31
USP21-204ENST00000479344 CDCA7Q9BWT1 371 aaPredicted RBP29.5■■■□□ 2.31
USP21-204ENST00000479344 NUP188Q5SRE5 1749 aa29.5■■■□□ 2.31
USP21-204ENST00000479344 R3HDM1Q15032 1099 aaKnown RBP29.49■■■□□ 2.31
USP21-204ENST00000479344 NLRP2Q9NX02 1062 aa29.49■■■□□ 2.31
USP21-204ENST00000479344 FYB1O15117 783 aa29.48■■■□□ 2.31
USP21-204ENST00000479344 COG3Q96JB2 828 aa29.48■■■□□ 2.31
USP21-204ENST00000479344 MAP3K19Q56UN5 1328 aa29.47■■■□□ 2.31
USP21-204ENST00000479344 IP6K1Q92551 441 aa29.47■■■□□ 2.31
USP21-204ENST00000479344 GGNBP2Q9H3C7 697 aa29.46■■■□□ 2.31
USP21-204ENST00000479344 PARD3Q8TEW0 1356 aa29.46■■■□□ 2.31
USP21-204ENST00000479344 EXOC5O00471 708 aa29.44■■■□□ 2.3
USP21-204ENST00000479344 CARD14Q9BXL6 1004 aa29.44■■■□□ 2.3
USP21-204ENST00000479344 BCL9O00512 1426 aa29.44■■■□□ 2.3
USP21-204ENST00000479344 TNS2Q63HR2 1409 aa29.44■■■□□ 2.3
USP21-204ENST00000479344 LRP5O75197 1615 aa29.43■■■□□ 2.3
USP21-204ENST00000479344 C11orf95C9JLR9 678 aaPredicted RBP29.43■■■□□ 2.3
USP21-204ENST00000479344 LTV1Q96GA3 475 aaPredicted RBP29.43■■■□□ 2.3
USP21-204ENST00000479344 RGPD2P0DJD1 1756 aa29.42■■■□□ 2.3
USP21-204ENST00000479344 CCER1Q8TC90 406 aaPredicted RBP29.42■■■□□ 2.3
USP21-204ENST00000479344 HOXC9P31274 260 aa29.41■■■□□ 2.3
USP21-204ENST00000479344 BCL11BQ9C0K0 894 aaPredicted RBP29.41■■■□□ 2.3
USP21-204ENST00000479344 KIF20BQ96Q89 1820 aa29.41■■■□□ 2.3
USP21-204ENST00000479344 IL2RBP14784 551 aa29.4■■■□□ 2.3
USP21-204ENST00000479344 RRS1Q15050 365 aaKnown RBP29.4■■■□□ 2.3
USP21-204ENST00000479344 CDCA8Q53HL2 280 aa29.4■■■□□ 2.3
USP21-204ENST00000479344 RGPD3A6NKT7 1758 aaPredicted RBP29.38■■■□□ 2.29
USP21-204ENST00000479344 RGPD4Q7Z3J3 1758 aa29.38■■■□□ 2.29
USP21-204ENST00000479344 FAM208AQ9UK61 1670 aaKnown RBP29.37■■■□□ 2.29
USP21-204ENST00000479344 KCNQ2O43526 872 aa29.37■■■□□ 2.29
USP21-204ENST00000479344 PROM2Q8N271 834 aa29.37■■■□□ 2.29
USP21-204ENST00000479344 PLSCR1O15162 318 aa29.36■■■□□ 2.29
USP21-204ENST00000479344 AMPHP49418 695 aa29.36■■■□□ 2.29
USP21-204ENST00000479344 NSD3Q9BZ95 1437 aa29.35■■■□□ 2.29
USP21-204ENST00000479344 NHSQ6T4R5 1651 aa29.32■■■□□ 2.28
USP21-204ENST00000479344 HSPA5P11021 654 aaKnown RBP29.32■■■□□ 2.28
USP21-204ENST00000479344 ACSBG1Q96GR2 724 aa29.32■■■□□ 2.28
USP21-204ENST00000479344 ANO8Q9HCE9 1232 aaPredicted RBP29.3■■■□□ 2.28
USP21-204ENST00000479344 RTL1A6NKG5 1358 aa29.29■■■□□ 2.28
USP21-204ENST00000479344 NBPF14Q5TI25 921 aa29.28■■■□□ 2.28
USP21-204ENST00000479344 NBPF6Q5VWK0 638 aa29.28■■■□□ 2.28
USP21-204ENST00000479344 NBPF4Q96M43 638 aa29.28■■■□□ 2.28
USP21-204ENST00000479344 SHANK3Q9BYB0 1731 aa29.28■■■□□ 2.28
USP21-204ENST00000479344 HSP90AB2PQ58FF8 381 aa29.27■■■□□ 2.28
USP21-204ENST00000479344 POLR3GLQ9BT43 218 aa29.27■■■□□ 2.28
USP21-204ENST00000479344 MEGF6O75095 1541 aa29.26■■■□□ 2.27
USP21-204ENST00000479344 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.27
USP21-204ENST00000479344 USHBP1Q8N6Y0 703 aa29.25■■■□□ 2.27
USP21-204ENST00000479344 DDX54Q8TDD1 881 aaKnown RBP29.24■■■□□ 2.27
USP21-204ENST00000479344 EMILIN1Q9Y6C2 1016 aa29.24■■■□□ 2.27
USP21-204ENST00000479344 BTAF1O14981 1849 aa29.24■■■□□ 2.27
USP21-204ENST00000479344 TXNRD1Q16881 649 aa29.23■■■□□ 2.27
USP21-204ENST00000479344 INSRP06213 1382 aa29.22■■■□□ 2.27
USP21-204ENST00000479344 PDGFDQ9GZP0 370 aaPredicted RBP29.2■■■□□ 2.26
USP21-204ENST00000479344 KAT6BQ8WYB5 2073 aa29.19■■■□□ 2.26
USP21-204ENST00000479344 FLT4P35916 1363 aa29.19■■■□□ 2.26
USP21-204ENST00000479344 ANKRD26Q9UPS8 1709 aa29.18■■■□□ 2.26
USP21-204ENST00000479344 CASZ1Q86V15 1759 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms