RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 TERF2IPQ9NYB0 399 aa23.49■■□□□ 1.35
PHF1-207ENST00000479029 AKAP12Q02952 1782 aa23.49■■□□□ 1.35
PHF1-207ENST00000479029 CSB-PGBD3P0DP91 1061 aa23.48■■□□□ 1.35
PHF1-207ENST00000479029 SLC24A1O60721 1099 aa23.47■■□□□ 1.35
PHF1-207ENST00000479029 DDB1Q16531 1140 aa23.47■■□□□ 1.35
PHF1-207ENST00000479029 CDCA7Q9BWT1 371 aaPredicted RBP23.47■■□□□ 1.35
PHF1-207ENST00000479029 USP31Q70CQ4 1352 aa23.46■■□□□ 1.35
PHF1-207ENST00000479029 NME9Q86XW9 330 aa23.46■■□□□ 1.35
PHF1-207ENST00000479029 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
PHF1-207ENST00000479029 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
PHF1-207ENST00000479029 COL18A1P39060 1754 aa23.45■■□□□ 1.34
PHF1-207ENST00000479029 CD163L1Q9NR16 1453 aa23.44■■□□□ 1.34
PHF1-207ENST00000479029 R3HDM1Q15032 1099 aaKnown RBP23.44■■□□□ 1.34
PHF1-207ENST00000479029 TESK2Q96S53 571 aa23.44■■□□□ 1.34
PHF1-207ENST00000479029 CARD10Q9BWT7 1032 aa23.44■■□□□ 1.34
PHF1-207ENST00000479029 TNS1Q9HBL0 1735 aaKnown RBP23.44■■□□□ 1.34
PHF1-207ENST00000479029 NFAT5O94916 1531 aa23.42■■□□□ 1.34
PHF1-207ENST00000479029 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
PHF1-207ENST00000479029 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
PHF1-207ENST00000479029 MON2Q7Z3U7 1717 aa23.41■■□□□ 1.34
PHF1-207ENST00000479029 OVOS2A0A0G2JMS6 1433 aa23.41■■□□□ 1.34
PHF1-207ENST00000479029 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
PHF1-207ENST00000479029 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
PHF1-207ENST00000479029 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
PHF1-207ENST00000479029 NINLQ9Y2I6 1382 aa23.39■■□□□ 1.33
PHF1-207ENST00000479029 EXOC5O00471 708 aa23.37■■□□□ 1.33
PHF1-207ENST00000479029 NBPF14Q5TI25 921 aa23.37■■□□□ 1.33
PHF1-207ENST00000479029 MARCH10Q8NA82 808 aaPredicted RBP23.37■■□□□ 1.33
PHF1-207ENST00000479029 CCDC7Q96M83 1385 aa23.37■■□□□ 1.33
PHF1-207ENST00000479029 ABCC6O95255 1503 aa23.36■■□□□ 1.33
PHF1-207ENST00000479029 BCL11BQ9C0K0 894 aaPredicted RBP23.35■■□□□ 1.33
PHF1-207ENST00000479029 NLRP2Q9NX02 1062 aa23.35■■□□□ 1.33
PHF1-207ENST00000479029 ERBB3P21860 1342 aa23.33■■□□□ 1.33
PHF1-207ENST00000479029 LRRC37A3O60309 1634 aa23.33■■□□□ 1.33
PHF1-207ENST00000479029 TMF1P82094 1093 aa23.33■■□□□ 1.33
PHF1-207ENST00000479029 RGPD5Q99666 1765 aa23.32■■□□□ 1.32
PHF1-207ENST00000479029 PLSCR1O15162 318 aa23.32■■□□□ 1.32
PHF1-207ENST00000479029 LRP5O75197 1615 aa23.32■■□□□ 1.32
PHF1-207ENST00000479029 USP47Q96K76 1375 aa23.31■■□□□ 1.32
PHF1-207ENST00000479029 ANKRD24Q8TF21 1146 aa23.31■■□□□ 1.32
PHF1-207ENST00000479029 COG3Q96JB2 828 aa23.31■■□□□ 1.32
PHF1-207ENST00000479029 BCL9O00512 1426 aa23.31■■□□□ 1.32
PHF1-207ENST00000479029 USP54Q70EL1 1684 aa23.31■■□□□ 1.32
PHF1-207ENST00000479029 PEAK1Q9H792 1746 aa23.3■■□□□ 1.32
PHF1-207ENST00000479029 TIMELESSQ9UNS1 1208 aa23.3■■□□□ 1.32
PHF1-207ENST00000479029 PTF1AQ7RTS3 328 aa23.29■■□□□ 1.32
PHF1-207ENST00000479029 IL2RBP14784 551 aa23.28■■□□□ 1.32
PHF1-207ENST00000479029 IP6K1Q92551 441 aa23.28■■□□□ 1.32
PHF1-207ENST00000479029 CDCA8Q53HL2 280 aa23.27■■□□□ 1.32
PHF1-207ENST00000479029 ANKRD36BQ8N2N9 1353 aa23.27■■□□□ 1.31
PHF1-207ENST00000479029 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
PHF1-207ENST00000479029 WNK3Q9BYP7 1800 aa23.25■■□□□ 1.31
PHF1-207ENST00000479029 RREB1Q92766 1687 aa23.25■■□□□ 1.31
PHF1-207ENST00000479029 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
PHF1-207ENST00000479029 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
PHF1-207ENST00000479029 LTN1O94822 1766 aa23.23■■□□□ 1.31
PHF1-207ENST00000479029 AMPHP49418 695 aa23.23■■□□□ 1.31
PHF1-207ENST00000479029 LTV1Q96GA3 475 aaPredicted RBP23.23■■□□□ 1.31
PHF1-207ENST00000479029 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
PHF1-207ENST00000479029 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
PHF1-207ENST00000479029 MAP3K19Q56UN5 1328 aa23.22■■□□□ 1.31
PHF1-207ENST00000479029 PROM2Q8N271 834 aa23.21■■□□□ 1.31
PHF1-207ENST00000479029 FYB1O15117 783 aa23.2■■□□□ 1.3
PHF1-207ENST00000479029 KCNQ2O43526 872 aa23.2■■□□□ 1.3
PHF1-207ENST00000479029 FBLN1P23142 703 aa23.2■■□□□ 1.3
PHF1-207ENST00000479029 HOXC9P31274 260 aa23.2■■□□□ 1.3
PHF1-207ENST00000479029 GGNBP2Q9H3C7 697 aa23.19■■□□□ 1.3
PHF1-207ENST00000479029 TXNRD1Q16881 649 aa23.18■■□□□ 1.3
PHF1-207ENST00000479029 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
PHF1-207ENST00000479029 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
PHF1-207ENST00000479029 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
PHF1-207ENST00000479029 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
PHF1-207ENST00000479029 ANO8Q9HCE9 1232 aaPredicted RBP23.16■■□□□ 1.3
PHF1-207ENST00000479029 RRS1Q15050 365 aaKnown RBP23.14■■□□□ 1.29
PHF1-207ENST00000479029 DDX54Q8TDD1 881 aaKnown RBP23.14■■□□□ 1.29
PHF1-207ENST00000479029 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
PHF1-207ENST00000479029 RTL1A6NKG5 1358 aa23.13■■□□□ 1.29
PHF1-207ENST00000479029 PPP1R1BQ9UD71 204 aaPredicted RBP23.12■■□□□ 1.29
PHF1-207ENST00000479029 CARD14Q9BXL6 1004 aa23.1■■□□□ 1.29
PHF1-207ENST00000479029 SLC15A2Q16348 729 aa23.09■■□□□ 1.29
PHF1-207ENST00000479029 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
PHF1-207ENST00000479029 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.29
PHF1-207ENST00000479029 NBPF4Q96M43 638 aa23.08■■□□□ 1.29
PHF1-207ENST00000479029 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.29
PHF1-207ENST00000479029 KAT6BQ8WYB5 2073 aa23.07■■□□□ 1.28
PHF1-207ENST00000479029 NHSQ6T4R5 1651 aa23.07■■□□□ 1.28
PHF1-207ENST00000479029 PDGFDQ9GZP0 370 aaPredicted RBP23.07■■□□□ 1.28
PHF1-207ENST00000479029 SMG6Q86US8 1419 aaKnown RBP23.07■■□□□ 1.28
PHF1-207ENST00000479029 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
PHF1-207ENST00000479029 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
PHF1-207ENST00000479029 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
PHF1-207ENST00000479029 NSD3Q9BZ95 1437 aa23.05■■□□□ 1.28
PHF1-207ENST00000479029 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
PHF1-207ENST00000479029 INSRP06213 1382 aa23.04■■□□□ 1.28
PHF1-207ENST00000479029 KIF24Q5T7B8 1368 aa23.04■■□□□ 1.28
PHF1-207ENST00000479029 ZBTB7AO95365 584 aa23.04■■□□□ 1.28
PHF1-207ENST00000479029 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
PHF1-207ENST00000479029 FLT4P35916 1363 aa23.03■■□□□ 1.28
PHF1-207ENST00000479029 PRIM1P49642 420 aaKnown RBP23.03■■□□□ 1.28
PHF1-207ENST00000479029 USHBP1Q8N6Y0 703 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms