RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 MST1RQ04912 1400 aa35.44■■■■□ 3.26
CHKB-208ENST00000479003 LRRC7Q96NW7 1537 aa35.43■■■■□ 3.26
CHKB-208ENST00000479003 RARSP54136 660 aaKnown RBP35.43■■■■□ 3.26
CHKB-208ENST00000479003 CDK12Q9NYV4 1490 aaPredicted RBP35.43■■■■□ 3.26
CHKB-208ENST00000479003 U2AF1L5P0DN76 240 aaPredicted RBP35.42■■■■□ 3.26
CHKB-208ENST00000479003 U2AF1Q01081 240 aaKnown RBP eCLIP35.42■■■■□ 3.26
CHKB-208ENST00000479003 DIAPH1O60610 1272 aaKnown RBP35.42■■■■□ 3.26
CHKB-208ENST00000479003 MARF1Q9Y4F3 1742 aaKnown RBP35.41■■■■□ 3.26
CHKB-208ENST00000479003 FOXO3O43524 673 aa35.41■■■■□ 3.26
CHKB-208ENST00000479003 CANXP27824 592 aaKnown RBP35.41■■■■□ 3.26
CHKB-208ENST00000479003 PSME1Q06323 249 aa35.41■■■■□ 3.26
CHKB-208ENST00000479003 FAM161AQ3B820 660 aa35.41■■■■□ 3.26
CHKB-208ENST00000479003 U2SURPO15042 1029 aaKnown RBP35.4■■■■□ 3.26
CHKB-208ENST00000479003 SOX12O15370 315 aa35.4■■■■□ 3.26
CHKB-208ENST00000479003 NUTM2GQ5VZR2 741 aa35.4■■■■□ 3.26
CHKB-208ENST00000479003 NBR1Q14596 966 aa35.39■■■■□ 3.26
CHKB-208ENST00000479003 MSH6P52701 1360 aa35.39■■■■□ 3.26
CHKB-208ENST00000479003 NLRP6P59044 892 aa35.39■■■■□ 3.26
CHKB-208ENST00000479003 ABTB2Q8N961 1025 aa35.38■■■■□ 3.25
CHKB-208ENST00000479003 PANK1Q8TE04 598 aa35.37■■■■□ 3.25
CHKB-208ENST00000479003 CLUAP1Q96AJ1 413 aa35.37■■■■□ 3.25
CHKB-208ENST00000479003 KIF1AQ12756 1690 aa35.37■■■■□ 3.25
CHKB-208ENST00000479003 USP54Q70EL1 1684 aa35.37■■■■□ 3.25
CHKB-208ENST00000479003 XPCQ01831 940 aaPredicted RBP35.36■■■■□ 3.25
CHKB-208ENST00000479003 C8orf34Q49A92 452 aa35.36■■■■□ 3.25
CHKB-208ENST00000479003 DDRGK1Q96HY6 314 aa35.36■■■■□ 3.25
CHKB-208ENST00000479003 MYH16Q9H6N6 1097 aa35.36■■■■□ 3.25
CHKB-208ENST00000479003 CADPS2Q86UW7 1296 aa35.36■■■■□ 3.25
CHKB-208ENST00000479003 COG6Q9Y2V7 657 aa35.35■■■■□ 3.25
CHKB-208ENST00000479003 IGHDP01880 384 aa35.35■■■■□ 3.25
CHKB-208ENST00000479003 PEAK1Q9H792 1746 aa35.34■■■■□ 3.25
CHKB-208ENST00000479003 AAMPQ13685 434 aa35.33■■■■□ 3.25
CHKB-208ENST00000479003 FRAT1Q92837 279 aaPredicted RBP35.32■■■■□ 3.25
CHKB-208ENST00000479003 PLEKHF1Q96S99 279 aa35.32■■■■□ 3.24
CHKB-208ENST00000479003 RGS3P49796 1198 aa35.3■■■■□ 3.24
CHKB-208ENST00000479003 VIRMAQ69YN4 1812 aaKnown RBP35.3■■■■□ 3.24
CHKB-208ENST00000479003 IL13P35225 146 aa35.29■■■■□ 3.24
CHKB-208ENST00000479003 MAP3K19Q56UN5 1328 aa35.29■■■■□ 3.24
CHKB-208ENST00000479003 TRPM3Q9HCF6 1732 aaPredicted RBP35.28■■■■□ 3.24
CHKB-208ENST00000479003 CT47B1P0C2W7 299 aaPredicted RBP35.25■■■■□ 3.23
CHKB-208ENST00000479003 KRT28Q7Z3Y7 464 aa35.24■■■■□ 3.23
CHKB-208ENST00000479003 DDX17Q92841 729 aaKnown RBP35.24■■■■□ 3.23
CHKB-208ENST00000479003 TMPOP42166 694 aaKnown RBP35.23■■■■□ 3.23
CHKB-208ENST00000479003 HSP90AB2PQ58FF8 381 aa35.23■■■■□ 3.23
CHKB-208ENST00000479003 RLBP1P12271 317 aa35.21■■■■□ 3.23
CHKB-208ENST00000479003 DEKP35659 375 aaKnown RBP35.21■■■■□ 3.23
CHKB-208ENST00000479003 EIF4A2Q14240 407 aaKnown RBP35.2■■■■□ 3.23
CHKB-208ENST00000479003 RTL5Q5HYW3 569 aaPredicted RBP35.2■■■■□ 3.23
CHKB-208ENST00000479003 SBNO1A3KN83 1393 aa35.2■■■■□ 3.23
CHKB-208ENST00000479003 TRIM35Q9UPQ4 493 aa35.2■■■■□ 3.22
CHKB-208ENST00000479003 MAPK8IP3Q9UPT6 1336 aa35.2■■■■□ 3.22
CHKB-208ENST00000479003 BCL2L13Q9BXK5 485 aa35.19■■■■□ 3.22
CHKB-208ENST00000479003 TNNQ9UQP3 1299 aa35.19■■■■□ 3.22
CHKB-208ENST00000479003 FLT4P35916 1363 aa35.18■■■■□ 3.22
CHKB-208ENST00000479003 HMOX1P09601 288 aa35.18■■■■□ 3.22
CHKB-208ENST00000479003 RSPH6AQ9H0K4 717 aa35.18■■■■□ 3.22
CHKB-208ENST00000479003 FCHSD2O94868 740 aa35.18■■■■□ 3.22
CHKB-208ENST00000479003 IL16Q14005 1332 aa35.17■■■■□ 3.22
CHKB-208ENST00000479003 LMOD2Q6P5Q4 547 aa35.17■■■■□ 3.22
CHKB-208ENST00000479003 NFAT5O94916 1531 aa35.16■■■■□ 3.22
CHKB-208ENST00000479003 PRKAR2BP31323 418 aa35.15■■■■□ 3.22
CHKB-208ENST00000479003 AMPHP49418 695 aa35.15■■■■□ 3.22
CHKB-208ENST00000479003 PNNQ9H307 717 aaKnown RBP35.15■■■■□ 3.22
CHKB-208ENST00000479003 ALS2Q96Q42 1657 aa35.14■■■■□ 3.22
CHKB-208ENST00000479003 BRINP3Q76B58 766 aa35.14■■■■□ 3.22
CHKB-208ENST00000479003 NPHP3Q7Z494 1330 aa35.13■■■■□ 3.21
CHKB-208ENST00000479003 TSR2Q969E8 191 aaKnown RBP35.13■■■■□ 3.21
CHKB-208ENST00000479003 PCDHB15Q9Y5E8 787 aa35.13■■■■□ 3.21
CHKB-208ENST00000479003 LTN1O94822 1766 aa35.13■■■■□ 3.21
CHKB-208ENST00000479003 ZKSCAN2Q63HK3 967 aa35.12■■■■□ 3.21
CHKB-208ENST00000479003 SLAIN2Q9P270 581 aa35.12■■■■□ 3.21
CHKB-208ENST00000479003 PLEKHG5O94827 1062 aa35.11■■■■□ 3.21
CHKB-208ENST00000479003 LAS1LQ9Y4W2 734 aaKnown RBP35.11■■■■□ 3.21
CHKB-208ENST00000479003 RGPD1P0DJD0 1748 aa35.1■■■■□ 3.21
CHKB-208ENST00000479003 EXOSC9Q06265 439 aaKnown RBP35.1■■■■□ 3.21
CHKB-208ENST00000479003 SLIT3O75094 1523 aa35.1■■■■□ 3.21
CHKB-208ENST00000479003 PXDNQ92626 1479 aa35.1■■■■□ 3.21
CHKB-208ENST00000479003 HOXC9P31274 260 aa35.09■■■■□ 3.21
CHKB-208ENST00000479003 MVPQ14764 893 aaKnown RBP35.09■■■■□ 3.21
CHKB-208ENST00000479003 KIF24Q5T7B8 1368 aa35.08■■■■□ 3.21
CHKB-208ENST00000479003 RIPK4P57078 832 aa35.08■■■■□ 3.21
CHKB-208ENST00000479003 USP35Q9P2H5 1018 aa35.08■■■■□ 3.21
CHKB-208ENST00000479003 USP19O94966 1318 aa35.07■■■■□ 3.21
CHKB-208ENST00000479003 KCNH5Q8NCM2 988 aa35.07■■■■□ 3.2
CHKB-208ENST00000479003 AEBP1Q8IUX7 1158 aa35.06■■■■□ 3.2
CHKB-208ENST00000479003 PHACTR3Q96KR7 559 aa35.06■■■■□ 3.2
CHKB-208ENST00000479003 GCP02774 474 aa35.06■■■■□ 3.2
CHKB-208ENST00000479003 DZIP1LQ8IYY4 767 aaKnown RBP35.05■■■■□ 3.2
CHKB-208ENST00000479003 RWDD1Q9H446 243 aaPredicted RBP35.04■■■■□ 3.2
CHKB-208ENST00000479003 RTL1A6NKG5 1358 aa35.03■■■■□ 3.2
CHKB-208ENST00000479003 SULT6B1Q6IMI4 303 aa35.03■■■■□ 3.2
CHKB-208ENST00000479003 SMC4Q9NTJ3 1288 aa35.03■■■■□ 3.2
CHKB-208ENST00000479003 MED1Q15648 1581 aaPredicted RBP35.02■■■■□ 3.2
CHKB-208ENST00000479003 TNS3Q68CZ2 1445 aa35.02■■■■□ 3.2
CHKB-208ENST00000479003 FTSJ3Q8IY81 847 aaKnown RBP35.02■■■■□ 3.2
CHKB-208ENST00000479003 SSH1Q8WYL5 1049 aa35■■■■□ 3.19
CHKB-208ENST00000479003 LTBP4Q8N2S1 1624 aa35■■■■□ 3.19
CHKB-208ENST00000479003 NEFMP07197 916 aa35■■■■□ 3.19
CHKB-208ENST00000479003 PHRF1Q9P1Y6 1649 aaKnown RBP34.99■■■■□ 3.19
CHKB-208ENST00000479003 ZBTB7CA1YPR0 619 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms