RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 ZNF511Q8NB15 262 aa9.47□□□□□ -0.89
STRADBP1-201ENST00000478954 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
STRADBP1-201ENST00000478954 KIF13AQ9H1H9 1805 aa9.47□□□□□ -0.89
STRADBP1-201ENST00000478954 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 TMCO4Q5TGY1 634 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 ADAMTS19Q8TE59 1207 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 FANCD2Q9BXW9 1451 aa9.46□□□□□ -0.9
STRADBP1-201ENST00000478954 CD2BP2O95400 341 aaKnown RBP9.45□□□□□ -0.9
STRADBP1-201ENST00000478954 OCSTAMPQ9BR26 566 aa9.45□□□□□ -0.9
STRADBP1-201ENST00000478954 PKD2L1Q9P0L9 805 aa9.45□□□□□ -0.9
STRADBP1-201ENST00000478954 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
STRADBP1-201ENST00000478954 WNT7BP56706 349 aa9.44□□□□□ -0.9
STRADBP1-201ENST00000478954 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
STRADBP1-201ENST00000478954 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
STRADBP1-201ENST00000478954 ACIN1Q9UKV3 1341 aaKnown RBP9.44□□□□□ -0.9
STRADBP1-201ENST00000478954 ARMC2Q8NEN0 867 aa9.43□□□□□ -0.9
STRADBP1-201ENST00000478954 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 GDF9O60383 454 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 FOXC1Q12948 553 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 HDGFL1Q5TGJ6 251 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 SH3RF1Q7Z6J0 888 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 PRM3Q9NNZ6 103 aa9.42□□□□□ -0.9
STRADBP1-201ENST00000478954 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
STRADBP1-201ENST00000478954 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
STRADBP1-201ENST00000478954 SRPK2P78362 688 aaKnown RBP9.41□□□□□ -0.9
STRADBP1-201ENST00000478954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 WNT7AO00755 349 aa9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 CFAP70Q5T0N1 1121 aa9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 MRGPRX2Q96LB1 330 aa9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
STRADBP1-201ENST00000478954 RFX1P22670 979 aa9.39□□□□□ -0.91
STRADBP1-201ENST00000478954 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
STRADBP1-201ENST00000478954 FOXD4L4Q8WXT5 416 aaPredicted RBP9.39□□□□□ -0.91
STRADBP1-201ENST00000478954 CLASP1Q7Z460 1538 aa9.39□□□□□ -0.91
STRADBP1-201ENST00000478954 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
STRADBP1-201ENST00000478954 GFRA3O60609 400 aa9.38□□□□□ -0.91
STRADBP1-201ENST00000478954 FBXO45P0C2W1 286 aa9.38□□□□□ -0.91
STRADBP1-201ENST00000478954 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
STRADBP1-201ENST00000478954 IFT140Q96RY7 1462 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 CARNS1A5YM72 827 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 SIAH2O43255 324 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 AGERQ15109 404 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 C1QTNF2Q9BXJ5 285 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
STRADBP1-201ENST00000478954 PDE4CQ08493 712 aa9.36□□□□□ -0.91
STRADBP1-201ENST00000478954 PNMA1Q8ND90 353 aa9.36□□□□□ -0.91
STRADBP1-201ENST00000478954 VARSP26640 1264 aaKnown RBP9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 PRR20EP86478 221 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 PRR20CP86479 221 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 PRR20DP86480 221 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 PRR20BP86481 221 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 PRR20AP86496 221 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
STRADBP1-201ENST00000478954 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
STRADBP1-201ENST00000478954 PTK2Q05397 1052 aa9.34□□□□□ -0.91
STRADBP1-201ENST00000478954 VAC14Q08AM6 782 aa9.34□□□□□ -0.91
STRADBP1-201ENST00000478954 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
STRADBP1-201ENST00000478954 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
STRADBP1-201ENST00000478954 GPSM3Q9Y4H4 160 aa9.34□□□□□ -0.91
STRADBP1-201ENST00000478954 LCE2BO14633 110 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 BRD1O95696 1058 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 KCNA1Q09470 495 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 NR1H3Q13133 447 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 Q6ZNB5 142 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 TOR4AQ9NXH8 423 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 USTQ9Y2C2 406 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 GAPVD1Q14C86 1478 aa9.33□□□□□ -0.92
STRADBP1-201ENST00000478954 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
STRADBP1-201ENST00000478954 ZBTB33Q86T24 672 aa9.32□□□□□ -0.92
STRADBP1-201ENST00000478954 ALG2Q9H553 416 aa9.32□□□□□ -0.92
STRADBP1-201ENST00000478954 DISP3Q9P2K9 1392 aa9.32□□□□□ -0.92
STRADBP1-201ENST00000478954 SYNJ2O15056 1496 aa9.32□□□□□ -0.92
STRADBP1-201ENST00000478954 J3QL48 77 aa9.31□□□□□ -0.92
STRADBP1-201ENST00000478954 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
STRADBP1-201ENST00000478954 FAM174AQ8TBP5 190 aa9.31□□□□□ -0.92
STRADBP1-201ENST00000478954 PALM3A6NDB9 673 aaPredicted RBP9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 CYP4X1Q8N118 509 aa9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 UCN2Q96RP3 112 aa9.3□□□□□ -0.92
STRADBP1-201ENST00000478954 AQRO60306 1485 aaKnown RBP eCLIP9.29□□□□□ -0.92
STRADBP1-201ENST00000478954 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
STRADBP1-201ENST00000478954 ALDH1A1P00352 501 aa9.29□□□□□ -0.92
STRADBP1-201ENST00000478954 SMPD1P17405 629 aa9.29□□□□□ -0.92
STRADBP1-201ENST00000478954 ADGRL1O94910 1474 aa9.28□□□□□ -0.92
STRADBP1-201ENST00000478954 KDM6BO15054 1643 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms