RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 INSM1Q01101 510 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-212ENST00000478573 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
CDC42BPA-212ENST00000478573 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
CDC42BPA-212ENST00000478573 EMILIN1Q9Y6C2 1016 aa9.17□□□□□ -0.94
CDC42BPA-212ENST00000478573 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
CDC42BPA-212ENST00000478573 EPS8L1Q8TE68 723 aa9.16□□□□□ -0.94
CDC42BPA-212ENST00000478573 IRF7Q92985 503 aa9.16□□□□□ -0.94
CDC42BPA-212ENST00000478573 HMX1Q9NP08 348 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPA-212ENST00000478573 ZC3H4Q9UPT8 1303 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 H3BM21 787 aa9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 RFC5P40937 340 aa9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 PTK2Q05397 1052 aa9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 PPP1R26Q5T8A7 1209 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 PNMA1Q8ND90 353 aa9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 KCTD15Q96SI1 283 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-212ENST00000478573 GMPRP36959 345 aa9.13□□□□□ -0.95
CDC42BPA-212ENST00000478573 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
CDC42BPA-212ENST00000478573 IL27Q8NEV9 243 aa9.13□□□□□ -0.95
CDC42BPA-212ENST00000478573 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
CDC42BPA-212ENST00000478573 RAB15P59190 212 aa9.12□□□□□ -0.95
CDC42BPA-212ENST00000478573 CBLBQ13191 982 aa9.12□□□□□ -0.95
CDC42BPA-212ENST00000478573 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-212ENST00000478573 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-212ENST00000478573 ERBB4Q15303 1308 aa9.11□□□□□ -0.95
CDC42BPA-212ENST00000478573 ADAM32Q8TC27 787 aa9.11□□□□□ -0.95
CDC42BPA-212ENST00000478573 OCSTAMPQ9BR26 566 aa9.11□□□□□ -0.95
CDC42BPA-212ENST00000478573 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
CDC42BPA-212ENST00000478573 INTS6LQ5JSJ4 861 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-212ENST00000478573 DNMT3LQ9UJW3 386 aa9.09□□□□□ -0.95
CDC42BPA-212ENST00000478573 SOS2Q07890 1332 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-212ENST00000478573 DHX9Q08211 1270 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-212ENST00000478573 GPSM3Q9Y4H4 160 aa9.08□□□□□ -0.96
CDC42BPA-212ENST00000478573 FIGNL2A6NMB9 653 aa9.07□□□□□ -0.96
CDC42BPA-212ENST00000478573 TTLL8A6PVC2 850 aa9.07□□□□□ -0.96
CDC42BPA-212ENST00000478573 NBPF20Q3BBV1 942 aa9.07□□□□□ -0.96
CDC42BPA-212ENST00000478573 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-212ENST00000478573 AGBL1Q96MI9 1066 aa9.07□□□□□ -0.96
CDC42BPA-212ENST00000478573 GOPCQ9HD26 462 aa9.07□□□□□ -0.96
CDC42BPA-212ENST00000478573 RELBQ01201 579 aa9.06□□□□□ -0.96
CDC42BPA-212ENST00000478573 TMEM259Q4ZIN3 620 aa9.05□□□□□ -0.96
CDC42BPA-212ENST00000478573 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
CDC42BPA-212ENST00000478573 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
CDC42BPA-212ENST00000478573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.96
CDC42BPA-212ENST00000478573 Q6ZVU0 165 aa9.04□□□□□ -0.96
CDC42BPA-212ENST00000478573 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
CDC42BPA-212ENST00000478573 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-212ENST00000478573 ZSCAN1Q8NBB4 408 aa9.03□□□□□ -0.96
CDC42BPA-212ENST00000478573 ZNF784Q8NCA9 323 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPA-212ENST00000478573 SPINT1O43278 529 aa9.02□□□□□ -0.97
CDC42BPA-212ENST00000478573 ZNF395Q9H8N7 513 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-212ENST00000478573 POLMQ9NP87 494 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-212ENST00000478573 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
CDC42BPA-212ENST00000478573 ERVH48-1M5A8F1 160 aa9.01□□□□□ -0.97
CDC42BPA-212ENST00000478573 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-212ENST00000478573 PCDHB9Q9Y5E1 797 aa9.01□□□□□ -0.97
CDC42BPA-212ENST00000478573 VSIG8P0DPA2 414 aa9□□□□□ -0.97
CDC42BPA-212ENST00000478573 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-212ENST00000478573 PTSQ03393 145 aa9□□□□□ -0.97
CDC42BPA-212ENST00000478573 CTSOP43234 321 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-212ENST00000478573 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
CDC42BPA-212ENST00000478573 ZBBXA8MT70 800 aa8.98□□□□□ -0.97
CDC42BPA-212ENST00000478573 FBXO45P0C2W1 286 aa8.98□□□□□ -0.97
CDC42BPA-212ENST00000478573 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
CDC42BPA-212ENST00000478573 CYLDQ9NQC7 956 aa8.98□□□□□ -0.97
CDC42BPA-212ENST00000478573 ADH1AP07327 375 aa8.97□□□□□ -0.97
CDC42BPA-212ENST00000478573 ESPNB1AK53 854 aa8.96□□□□□ -0.98
CDC42BPA-212ENST00000478573 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-212ENST00000478573 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
CDC42BPA-212ENST00000478573 LILRA1O75019 489 aa8.95□□□□□ -0.98
CDC42BPA-212ENST00000478573 GIGYF1O75420 1035 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-212ENST00000478573 ADD1P35611 737 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-212ENST00000478573 CDC14CA4D256 554 aa8.93□□□□□ -0.98
CDC42BPA-212ENST00000478573 PTGIRP43119 386 aa8.93□□□□□ -0.98
CDC42BPA-212ENST00000478573 SEPT12Q8IYM1 358 aa8.93□□□□□ -0.98
CDC42BPA-212ENST00000478573 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
CDC42BPA-212ENST00000478573 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-212ENST00000478573 SLC35F4A4IF30 521 aa8.91□□□□□ -0.98
CDC42BPA-212ENST00000478573 FOXD4L5Q5VV16 416 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-212ENST00000478573 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
CDC42BPA-212ENST00000478573 CNTNAP3BQ96NU0 1288 aa8.91□□□□□ -0.98
CDC42BPA-212ENST00000478573 CNTNAP3Q9BZ76 1288 aa8.91□□□□□ -0.98
CDC42BPA-212ENST00000478573 NDUFB9Q9Y6M9 179 aa8.91□□□□□ -0.98
CDC42BPA-212ENST00000478573 ITGA6P23229 1130 aa8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 NR1H3Q13133 447 aa8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 KDF1Q8NAX2 398 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 MTMR14Q8NCE2 650 aa8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 BANK1Q8NDB2 785 aa8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 SNRKQ9NRH2 765 aa8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 ZNF330Q9Y3S2 320 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-212ENST00000478573 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
CDC42BPA-212ENST00000478573 MEN1O00255 615 aa8.89□□□□□ -0.99
CDC42BPA-212ENST00000478573 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPA-212ENST00000478573 APBB1O00213 710 aa8.88□□□□□ -0.99
CDC42BPA-212ENST00000478573 KRT76Q01546 638 aa8.88□□□□□ -0.99
CDC42BPA-212ENST00000478573 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
CDC42BPA-212ENST00000478573 LYSMD3Q7Z3D4 306 aa8.88□□□□□ -0.99
CDC42BPA-212ENST00000478573 PRICKLE2Q7Z3G6 844 aa8.88□□□□□ -0.99
CDC42BPA-212ENST00000478573 VWA5B2Q8N398 1253 aa8.88□□□□□ -0.99
CDC42BPA-212ENST00000478573 RHOQP17081 205 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms