RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 NFE2L2Q16236 605 aa22.03■■□□□ 1.12
LINC00336-201ENST00000477984 EXOSC9Q06265 439 aaKnown RBP22.02■■□□□ 1.12
LINC00336-201ENST00000477984 RRS1Q15050 365 aaKnown RBP22.02■■□□□ 1.12
LINC00336-201ENST00000477984 GSE1Q14687 1217 aa22.01■■□□□ 1.11
LINC00336-201ENST00000477984 USP31Q70CQ4 1352 aa22.01■■□□□ 1.11
LINC00336-201ENST00000477984 NUTM2FA1L443 756 aa22.01■■□□□ 1.11
LINC00336-201ENST00000477984 CLUAP1Q96AJ1 413 aa22.01■■□□□ 1.11
LINC00336-201ENST00000477984 COG6Q9Y2V7 657 aa22.01■■□□□ 1.11
LINC00336-201ENST00000477984 TTC21AQ8NDW8 1320 aa22■■□□□ 1.11
LINC00336-201ENST00000477984 HMOX1P09601 288 aa22■■□□□ 1.11
LINC00336-201ENST00000477984 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
LINC00336-201ENST00000477984 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
LINC00336-201ENST00000477984 BCL2L13Q9BXK5 485 aa21.99■■□□□ 1.11
LINC00336-201ENST00000477984 ANKARQ7Z5J8 1434 aa21.99■■□□□ 1.11
LINC00336-201ENST00000477984 CALD1Q05682 793 aaKnown RBP21.98■■□□□ 1.11
LINC00336-201ENST00000477984 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
LINC00336-201ENST00000477984 ZKSCAN2Q63HK3 967 aa21.97■■□□□ 1.11
LINC00336-201ENST00000477984 RLBP1P12271 317 aa21.96■■□□□ 1.11
LINC00336-201ENST00000477984 KCNA6P17658 529 aa21.95■■□□□ 1.11
LINC00336-201ENST00000477984 SMC4Q9NTJ3 1288 aa21.94■■□□□ 1.1
LINC00336-201ENST00000477984 TNNQ9UQP3 1299 aa21.94■■□□□ 1.1
LINC00336-201ENST00000477984 LMOD3Q0VAK6 560 aa21.94■■□□□ 1.1
LINC00336-201ENST00000477984 IGHDP01880 384 aa21.93■■□□□ 1.1
LINC00336-201ENST00000477984 EIF4A2Q14240 407 aaKnown RBP21.93■■□□□ 1.1
LINC00336-201ENST00000477984 ANKLE2Q86XL3 938 aa21.93■■□□□ 1.1
LINC00336-201ENST00000477984 PMFBP1Q8TBY8 1022 aa21.93■■□□□ 1.1
LINC00336-201ENST00000477984 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
LINC00336-201ENST00000477984 RGS3P49796 1198 aa21.92■■□□□ 1.1
LINC00336-201ENST00000477984 NGDNQ8NEJ9 315 aaKnown RBP21.92■■□□□ 1.1
LINC00336-201ENST00000477984 ZNF428Q96B54 188 aa21.92■■□□□ 1.1
LINC00336-201ENST00000477984 USP19O94966 1318 aa21.92■■□□□ 1.1
LINC00336-201ENST00000477984 PEAK1Q9H792 1746 aa21.91■■□□□ 1.1
LINC00336-201ENST00000477984 FMN2Q9NZ56 1722 aa21.91■■□□□ 1.1
LINC00336-201ENST00000477984 MVPQ14764 893 aaKnown RBP21.91■■□□□ 1.1
LINC00336-201ENST00000477984 ALDH1L2Q3SY69 923 aa21.91■■□□□ 1.1
LINC00336-201ENST00000477984 DZIP1LQ8IYY4 767 aaKnown RBP21.91■■□□□ 1.1
LINC00336-201ENST00000477984 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
LINC00336-201ENST00000477984 IL27Q8NEV9 243 aa21.91■■□□□ 1.1
LINC00336-201ENST00000477984 ZNF853P0CG23 659 aa21.89■■□□□ 1.1
LINC00336-201ENST00000477984 GNAI1P63096 354 aa21.89■■□□□ 1.1
LINC00336-201ENST00000477984 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.09
LINC00336-201ENST00000477984 SLC4A3P48751 1232 aa21.89■■□□□ 1.09
LINC00336-201ENST00000477984 FTSJ3Q8IY81 847 aaKnown RBP21.88■■□□□ 1.09
LINC00336-201ENST00000477984 KIF16BQ96L93 1317 aa21.88■■□□□ 1.09
LINC00336-201ENST00000477984 RGPD1P0DJD0 1748 aa21.88■■□□□ 1.09
LINC00336-201ENST00000477984 BRPF1P55201 1214 aaPredicted RBP21.88■■□□□ 1.09
LINC00336-201ENST00000477984 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
LINC00336-201ENST00000477984 CHD2O14647 1828 aaKnown RBP21.87■■□□□ 1.09
LINC00336-201ENST00000477984 TRIM27P14373 513 aa21.87■■□□□ 1.09
LINC00336-201ENST00000477984 PIK3C2AO00443 1686 aa21.86■■□□□ 1.09
LINC00336-201ENST00000477984 SBNO1A3KN83 1393 aa21.86■■□□□ 1.09
LINC00336-201ENST00000477984 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
LINC00336-201ENST00000477984 THUMPD2Q9BTF0 503 aaKnown RBP21.86■■□□□ 1.09
LINC00336-201ENST00000477984 NOB1Q9ULX3 412 aaKnown RBP21.86■■□□□ 1.09
LINC00336-201ENST00000477984 PCDHB15Q9Y5E8 787 aa21.86■■□□□ 1.09
LINC00336-201ENST00000477984 MAP3K19Q56UN5 1328 aa21.85■■□□□ 1.09
LINC00336-201ENST00000477984 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
LINC00336-201ENST00000477984 HSP90AB2PQ58FF8 381 aa21.85■■□□□ 1.09
LINC00336-201ENST00000477984 ARHGEF10O15013 1369 aa21.84■■□□□ 1.09
LINC00336-201ENST00000477984 FLT4P35916 1363 aa21.84■■□□□ 1.09
LINC00336-201ENST00000477984 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
LINC00336-201ENST00000477984 CFAP44Q96MT7 982 aa21.84■■□□□ 1.09
LINC00336-201ENST00000477984 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
LINC00336-201ENST00000477984 USP54Q70EL1 1684 aa21.84■■□□□ 1.09
LINC00336-201ENST00000477984 BECN1Q14457 450 aa21.83■■□□□ 1.08
LINC00336-201ENST00000477984 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.08
LINC00336-201ENST00000477984 VAMP4O75379 141 aa21.82■■□□□ 1.08
LINC00336-201ENST00000477984 MBIPQ9NS73 344 aa21.82■■□□□ 1.08
LINC00336-201ENST00000477984 RWDD1Q9H446 243 aaPredicted RBP21.82■■□□□ 1.08
LINC00336-201ENST00000477984 KIF24Q5T7B8 1368 aa21.8■■□□□ 1.08
LINC00336-201ENST00000477984 SETD1BQ9UPS6 1966 aaKnown RBP21.8■■□□□ 1.08
LINC00336-201ENST00000477984 FRAT2O75474 233 aaPredicted RBP21.79■■□□□ 1.08
LINC00336-201ENST00000477984 FAM83GA6ND36 823 aa21.79■■□□□ 1.08
LINC00336-201ENST00000477984 SOX12O15370 315 aa21.79■■□□□ 1.08
LINC00336-201ENST00000477984 NPHP4O75161 1426 aaPredicted RBP21.79■■□□□ 1.08
LINC00336-201ENST00000477984 NLRP6P59044 892 aa21.78■■□□□ 1.08
LINC00336-201ENST00000477984 MRPL50Q8N5N7 158 aaKnown RBP21.78■■□□□ 1.08
LINC00336-201ENST00000477984 ADGRL3Q9HAR2 1447 aa21.78■■□□□ 1.08
LINC00336-201ENST00000477984 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
LINC00336-201ENST00000477984 ARHGAP45Q92619 1136 aa21.77■■□□□ 1.08
LINC00336-201ENST00000477984 KDRP35968 1356 aa21.77■■□□□ 1.08
LINC00336-201ENST00000477984 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.08
LINC00336-201ENST00000477984 TMEM57Q8N5G2 664 aa21.77■■□□□ 1.08
LINC00336-201ENST00000477984 TSPYL6Q8N831 410 aa21.77■■□□□ 1.08
LINC00336-201ENST00000477984 AMPHP49418 695 aa21.76■■□□□ 1.07
LINC00336-201ENST00000477984 PHF8Q9UPP1 1060 aa21.76■■□□□ 1.07
LINC00336-201ENST00000477984 TWISTNBQ3B726 338 aaPredicted RBP21.76■■□□□ 1.07
LINC00336-201ENST00000477984 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
LINC00336-201ENST00000477984 DCTN1Q14203 1278 aa21.75■■□□□ 1.07
LINC00336-201ENST00000477984 HDAC1Q13547 482 aaPredicted RBP21.74■■□□□ 1.07
LINC00336-201ENST00000477984 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
LINC00336-201ENST00000477984 SEC24BO95487 1268 aa21.73■■□□□ 1.07
LINC00336-201ENST00000477984 C8orf58Q8NAV2 365 aa21.73■■□□□ 1.07
LINC00336-201ENST00000477984 TBC1D32Q96NH3 1257 aa21.73■■□□□ 1.07
LINC00336-201ENST00000477984 ZBTB40Q9NUA8 1239 aa21.73■■□□□ 1.07
LINC00336-201ENST00000477984 ABTB2Q8N961 1025 aa21.73■■□□□ 1.07
LINC00336-201ENST00000477984 UPF2Q9HAU5 1272 aaKnown RBP21.73■■□□□ 1.07
LINC00336-201ENST00000477984 BRPF3Q9ULD4 1205 aa21.73■■□□□ 1.07
LINC00336-201ENST00000477984 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
LINC00336-201ENST00000477984 CHL1O00533 1208 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms