RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 RANGAP1P46060 587 aaPredicted RBP10.99□□□□□ -0.65
USP33-208ENST00000477949 DEPDC5O75140 1603 aa10.98□□□□□ -0.65
USP33-208ENST00000477949 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
USP33-208ENST00000477949 ZNF787Q6DD87 383 aa10.98□□□□□ -0.65
USP33-208ENST00000477949 SYNMO15061 1565 aa10.98□□□□□ -0.65
USP33-208ENST00000477949 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
USP33-208ENST00000477949 PRR20EP86478 221 aa10.97□□□□□ -0.65
USP33-208ENST00000477949 PRR20CP86479 221 aa10.97□□□□□ -0.65
USP33-208ENST00000477949 PRR20DP86480 221 aa10.97□□□□□ -0.65
USP33-208ENST00000477949 PRR20BP86481 221 aa10.97□□□□□ -0.65
USP33-208ENST00000477949 PRR20AP86496 221 aa10.97□□□□□ -0.65
USP33-208ENST00000477949 ATP7AQ04656 1500 aa10.97□□□□□ -0.65
USP33-208ENST00000477949 ZNF697Q5TEC3 545 aa10.96□□□□□ -0.65
USP33-208ENST00000477949 SPSB2Q99619 263 aa10.96□□□□□ -0.65
USP33-208ENST00000477949 SYCP2Q9BX26 1530 aa10.95□□□□□ -0.66
USP33-208ENST00000477949 A2MP01023 1474 aa10.95□□□□□ -0.66
USP33-208ENST00000477949 CLIP1P30622 1438 aa10.95□□□□□ -0.66
USP33-208ENST00000477949 GPR37O15354 613 aa10.95□□□□□ -0.66
USP33-208ENST00000477949 DGAT1O75907 488 aa10.95□□□□□ -0.66
USP33-208ENST00000477949 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
USP33-208ENST00000477949 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
USP33-208ENST00000477949 FMN1Q68DA7 1419 aa10.94□□□□□ -0.66
USP33-208ENST00000477949 XIRP1Q702N8 1843 aaKnown RBP10.94□□□□□ -0.66
USP33-208ENST00000477949 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
USP33-208ENST00000477949 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
USP33-208ENST00000477949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP33-208ENST00000477949 IQGAP1P46940 1657 aa10.93□□□□□ -0.66
USP33-208ENST00000477949 DDX11L8A8MPP1 907 aa10.93□□□□□ -0.66
USP33-208ENST00000477949 CDK11AQ9UQ88 783 aaPredicted RBP10.93□□□□□ -0.66
USP33-208ENST00000477949 ZC3H13Q5T200 1668 aaKnown RBP10.92□□□□□ -0.66
USP33-208ENST00000477949 GDF9O60383 454 aa10.92□□□□□ -0.66
USP33-208ENST00000477949 ATP6V1AP38606 617 aa10.92□□□□□ -0.66
USP33-208ENST00000477949 MORN1Q5T089 497 aa10.92□□□□□ -0.66
USP33-208ENST00000477949 TNRQ92752 1358 aa10.91□□□□□ -0.66
USP33-208ENST00000477949 SPAG9O60271 1321 aaKnown RBP10.91□□□□□ -0.66
USP33-208ENST00000477949 PLA2G2CQ5R387 149 aa10.91□□□□□ -0.66
USP33-208ENST00000477949 SULF1Q8IWU6 871 aa10.91□□□□□ -0.66
USP33-208ENST00000477949 PZPP20742 1482 aa10.91□□□□□ -0.66
USP33-208ENST00000477949 GCGRP47871 477 aa10.9□□□□□ -0.66
USP33-208ENST00000477949 MYT1Q01538 1121 aa10.9□□□□□ -0.66
USP33-208ENST00000477949 FUT2Q10981 343 aa10.9□□□□□ -0.66
USP33-208ENST00000477949 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.66
USP33-208ENST00000477949 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
USP33-208ENST00000477949 GGT6Q6P531 493 aa10.89□□□□□ -0.67
USP33-208ENST00000477949 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
USP33-208ENST00000477949 EEA1Q15075 1411 aa10.89□□□□□ -0.67
USP33-208ENST00000477949 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 FAM135BQ49AJ0 1406 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 ANKLE2Q86XL3 938 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 THAP11Q96EK4 314 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 UGGT1Q9NYU2 1555 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 KIAA1107Q9UPP5 1409 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 FAM135AQ9P2D6 1515 aa10.88□□□□□ -0.67
USP33-208ENST00000477949 GPATCH8Q9UKJ3 1502 aaKnown RBP10.88□□□□□ -0.67
USP33-208ENST00000477949 NLRP1Q9C000 1473 aa10.87□□□□□ -0.67
USP33-208ENST00000477949 FMNL1O95466 1100 aaPredicted RBP10.87□□□□□ -0.67
USP33-208ENST00000477949 RPIAP49247 311 aa10.87□□□□□ -0.67
USP33-208ENST00000477949 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
USP33-208ENST00000477949 SLC27A5Q9Y2P5 690 aa10.87□□□□□ -0.67
USP33-208ENST00000477949 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
USP33-208ENST00000477949 KDM5DQ9BY66 1539 aa10.86□□□□□ -0.67
USP33-208ENST00000477949 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
USP33-208ENST00000477949 ATP1B4Q9UN42 357 aaPredicted RBP10.86□□□□□ -0.67
USP33-208ENST00000477949 MIA2Q96PC5 1412 aa10.85□□□□□ -0.67
USP33-208ENST00000477949 FAM187AA6NFU0 413 aa10.85□□□□□ -0.67
USP33-208ENST00000477949 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
USP33-208ENST00000477949 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP33-208ENST00000477949 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
USP33-208ENST00000477949 FAM160A2Q8N612 972 aaPredicted RBP10.85□□□□□ -0.67
USP33-208ENST00000477949 GRIPAP1Q4V328 841 aa10.84□□□□□ -0.67
USP33-208ENST00000477949 BRICD5Q6PL45 260 aa10.84□□□□□ -0.67
USP33-208ENST00000477949 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
USP33-208ENST00000477949 ROBO1Q9Y6N7 1651 aa10.83□□□□□ -0.68
USP33-208ENST00000477949 CCDC18Q5T9S5 1454 aa10.83□□□□□ -0.68
USP33-208ENST00000477949 PLEKHH2Q8IVE3 1493 aa10.83□□□□□ -0.68
USP33-208ENST00000477949 FOXC1Q12948 553 aa10.83□□□□□ -0.68
USP33-208ENST00000477949 PKD2L1Q9P0L9 805 aa10.83□□□□□ -0.68
USP33-208ENST00000477949 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
USP33-208ENST00000477949 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
USP33-208ENST00000477949 FCF1Q9Y324 198 aaKnown RBP10.82□□□□□ -0.68
USP33-208ENST00000477949 MAP3K1Q13233 1512 aa10.82□□□□□ -0.68
USP33-208ENST00000477949 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
USP33-208ENST00000477949 CASKIN1Q8WXD9 1431 aa10.81□□□□□ -0.68
USP33-208ENST00000477949 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
USP33-208ENST00000477949 ZNF777Q9ULD5 760 aaPredicted RBP10.8□□□□□ -0.68
USP33-208ENST00000477949 ARHGAP23Q9P227 1491 aa10.8□□□□□ -0.68
USP33-208ENST00000477949 LRP6O75581 1613 aa10.8□□□□□ -0.68
USP33-208ENST00000477949 UBR1Q8IWV7 1749 aa10.79□□□□□ -0.68
USP33-208ENST00000477949 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
USP33-208ENST00000477949 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
USP33-208ENST00000477949 SCAF11Q99590 1463 aaKnown RBP10.79□□□□□ -0.68
USP33-208ENST00000477949 SLIT1O75093 1534 aa10.78□□□□□ -0.68
USP33-208ENST00000477949 POTECB2RU33 542 aa10.77□□□□□ -0.69
USP33-208ENST00000477949 MSS51Q4VC12 460 aa10.77□□□□□ -0.69
USP33-208ENST00000477949 COL16A1Q07092 1604 aaPredicted RBP10.76□□□□□ -0.69
USP33-208ENST00000477949 ERVK-7P63135 1459 aa10.76□□□□□ -0.69
USP33-208ENST00000477949 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
USP33-208ENST00000477949 ZBTB24O43167 697 aaPredicted RBP10.76□□□□□ -0.69
USP33-208ENST00000477949 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms