RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
ERCC8-205ENST00000477893 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
ERCC8-205ENST00000477893 FAM83GA6ND36 823 aa11.76□□□□□ -0.53
ERCC8-205ENST00000477893 MYT1Q01538 1121 aa11.76□□□□□ -0.53
ERCC8-205ENST00000477893 GJD4Q96KN9 370 aaPredicted RBP11.76□□□□□ -0.53
ERCC8-205ENST00000477893 BTG4Q9NY30 223 aa11.76□□□□□ -0.53
ERCC8-205ENST00000477893 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.75□□□□□ -0.53
ERCC8-205ENST00000477893 ZC3H6P61129 1189 aaKnown RBP11.75□□□□□ -0.53
ERCC8-205ENST00000477893 CHRNA2Q15822 529 aa11.75□□□□□ -0.53
ERCC8-205ENST00000477893 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
ERCC8-205ENST00000477893 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
ERCC8-205ENST00000477893 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
ERCC8-205ENST00000477893 GLI3P10071 1580 aa11.75□□□□□ -0.53
ERCC8-205ENST00000477893 PHRF1Q9P1Y6 1649 aaKnown RBP11.75□□□□□ -0.53
ERCC8-205ENST00000477893 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
ERCC8-205ENST00000477893 KIAA0232Q92628 1395 aa11.74□□□□□ -0.53
ERCC8-205ENST00000477893 COL14A1Q05707 1796 aaKnown RBP11.73□□□□□ -0.53
ERCC8-205ENST00000477893 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
ERCC8-205ENST00000477893 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
ERCC8-205ENST00000477893 NRAPQ86VF7 1730 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 NRKQ7Z2Y5 1582 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 USP6P35125 1406 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 VPS72Q15906 364 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 STRN4Q9NRL3 753 aa11.72□□□□□ -0.53
ERCC8-205ENST00000477893 SOX12O15370 315 aa11.71□□□□□ -0.53
ERCC8-205ENST00000477893 NLRP6P59044 892 aa11.7□□□□□ -0.54
ERCC8-205ENST00000477893 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
ERCC8-205ENST00000477893 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
ERCC8-205ENST00000477893 CCER1Q8TC90 406 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-205ENST00000477893 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
ERCC8-205ENST00000477893 ST20-MTHFSA0A0A6YYL1 179 aa11.69□□□□□ -0.54
ERCC8-205ENST00000477893 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
ERCC8-205ENST00000477893 PIK3C2AO00443 1686 aa11.68□□□□□ -0.54
ERCC8-205ENST00000477893 USP19O94966 1318 aa11.68□□□□□ -0.54
ERCC8-205ENST00000477893 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
ERCC8-205ENST00000477893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
ERCC8-205ENST00000477893 USP47Q96K76 1375 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 SBNO2Q9Y2G9 1366 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 GCP02774 474 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 EVA1CP58658 441 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
ERCC8-205ENST00000477893 BRWD3Q6RI45 1802 aa11.66□□□□□ -0.54
ERCC8-205ENST00000477893 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
ERCC8-205ENST00000477893 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
ERCC8-205ENST00000477893 EP400Q96L91 3159 aa11.66□□□□□ -0.54
ERCC8-205ENST00000477893 SPATA31A5Q5VU36 1347 aa11.65□□□□□ -0.54
ERCC8-205ENST00000477893 SPATA31A7Q8IWB4 1347 aa11.65□□□□□ -0.54
ERCC8-205ENST00000477893 MAP3K13O43283 966 aa11.65□□□□□ -0.54
ERCC8-205ENST00000477893 FAM182BQ5T319 152 aa11.65□□□□□ -0.54
ERCC8-205ENST00000477893 LARP1Q6PKG0 1096 aaKnown RBP11.65□□□□□ -0.54
ERCC8-205ENST00000477893 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
ERCC8-205ENST00000477893 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.55
ERCC8-205ENST00000477893 SLIT3O75094 1523 aa11.65□□□□□ -0.55
ERCC8-205ENST00000477893 CAMTA1Q9Y6Y1 1673 aa11.65□□□□□ -0.55
ERCC8-205ENST00000477893 CD163L1Q9NR16 1453 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 MON2Q7Z3U7 1717 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
ERCC8-205ENST00000477893 SEC24BO95487 1268 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 KRT27Q7Z3Y8 459 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
ERCC8-205ENST00000477893 NME9Q86XW9 330 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 TESK2Q96S53 571 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 CPDO75976 1380 aa11.64□□□□□ -0.55
ERCC8-205ENST00000477893 SPATA31A1Q5TZJ5 1347 aa11.63□□□□□ -0.55
ERCC8-205ENST00000477893 LMO7Q8WWI1 1683 aa11.63□□□□□ -0.55
ERCC8-205ENST00000477893 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
ERCC8-205ENST00000477893 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
ERCC8-205ENST00000477893 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
ERCC8-205ENST00000477893 TIE1P35590 1138 aa11.61□□□□□ -0.55
ERCC8-205ENST00000477893 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
ERCC8-205ENST00000477893 THSD7AQ9UPZ6 1657 aa11.61□□□□□ -0.55
ERCC8-205ENST00000477893 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
ERCC8-205ENST00000477893 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
ERCC8-205ENST00000477893 TMF1P82094 1093 aa11.6□□□□□ -0.55
ERCC8-205ENST00000477893 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
ERCC8-205ENST00000477893 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
ERCC8-205ENST00000477893 NFAT5O94916 1531 aa11.6□□□□□ -0.55
ERCC8-205ENST00000477893 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
ERCC8-205ENST00000477893 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
ERCC8-205ENST00000477893 AATKQ6ZMQ8 1374 aa11.59□□□□□ -0.55
ERCC8-205ENST00000477893 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
ERCC8-205ENST00000477893 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
ERCC8-205ENST00000477893 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
ERCC8-205ENST00000477893 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
ERCC8-205ENST00000477893 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
ERCC8-205ENST00000477893 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
ERCC8-205ENST00000477893 CRB1P82279 1406 aa11.58□□□□□ -0.56
ERCC8-205ENST00000477893 ARHGEF25Q86VW2 580 aa11.57□□□□□ -0.56
ERCC8-205ENST00000477893 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
ERCC8-205ENST00000477893 NINLQ9Y2I6 1382 aa11.56□□□□□ -0.56
ERCC8-205ENST00000477893 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
ERCC8-205ENST00000477893 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
ERCC8-205ENST00000477893 COL18A1P39060 1754 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms