RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
APTX-221ENST00000477119 SRCAPQ6ZRS2 3230 aa18.91■□□□□ 0.62
APTX-221ENST00000477119 DDB1Q16531 1140 aa18.91■□□□□ 0.62
APTX-221ENST00000477119 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
APTX-221ENST00000477119 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
APTX-221ENST00000477119 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
APTX-221ENST00000477119 R3HDM1Q15032 1099 aaKnown RBP18.9■□□□□ 0.62
APTX-221ENST00000477119 TESK2Q96S53 571 aa18.9■□□□□ 0.62
APTX-221ENST00000477119 USP31Q70CQ4 1352 aa18.9■□□□□ 0.62
APTX-221ENST00000477119 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
APTX-221ENST00000477119 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
APTX-221ENST00000477119 COL18A1P39060 1754 aa18.88■□□□□ 0.61
APTX-221ENST00000477119 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
APTX-221ENST00000477119 CDCA7Q9BWT1 371 aaPredicted RBP18.87■□□□□ 0.61
APTX-221ENST00000477119 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
APTX-221ENST00000477119 NFAT5O94916 1531 aa18.86■□□□□ 0.61
APTX-221ENST00000477119 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
APTX-221ENST00000477119 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
APTX-221ENST00000477119 EDC4Q6P2E9 1401 aaKnown RBP18.85■□□□□ 0.61
APTX-221ENST00000477119 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
APTX-221ENST00000477119 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
APTX-221ENST00000477119 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
APTX-221ENST00000477119 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
APTX-221ENST00000477119 MARCH10Q8NA82 808 aaPredicted RBP18.84■□□□□ 0.61
APTX-221ENST00000477119 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.61
APTX-221ENST00000477119 EXOC5O00471 708 aa18.83■□□□□ 0.6
APTX-221ENST00000477119 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
APTX-221ENST00000477119 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
APTX-221ENST00000477119 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
APTX-221ENST00000477119 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
APTX-221ENST00000477119 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
APTX-221ENST00000477119 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
APTX-221ENST00000477119 ERBB3P21860 1342 aa18.8■□□□□ 0.6
APTX-221ENST00000477119 TMF1P82094 1093 aa18.8■□□□□ 0.6
APTX-221ENST00000477119 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
APTX-221ENST00000477119 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
APTX-221ENST00000477119 USP47Q96K76 1375 aa18.8■□□□□ 0.6
APTX-221ENST00000477119 LRRC37A3O60309 1634 aa18.79■□□□□ 0.6
APTX-221ENST00000477119 PLSCR1O15162 318 aa18.78■□□□□ 0.6
APTX-221ENST00000477119 COG3Q96JB2 828 aa18.78■□□□□ 0.6
APTX-221ENST00000477119 ABCC6O95255 1503 aa18.78■□□□□ 0.6
APTX-221ENST00000477119 RGPD5Q99666 1765 aa18.77■□□□□ 0.6
APTX-221ENST00000477119 PEAK1Q9H792 1746 aa18.77■□□□□ 0.59
APTX-221ENST00000477119 IP6K1Q92551 441 aa18.76■□□□□ 0.59
APTX-221ENST00000477119 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
APTX-221ENST00000477119 LRP5O75197 1615 aa18.75■□□□□ 0.59
APTX-221ENST00000477119 IL2RBP14784 551 aa18.75■□□□□ 0.59
APTX-221ENST00000477119 FBLN1P23142 703 aa18.75■□□□□ 0.59
APTX-221ENST00000477119 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
APTX-221ENST00000477119 ANKRD36BQ8N2N9 1353 aa18.75■□□□□ 0.59
APTX-221ENST00000477119 USP54Q70EL1 1684 aa18.75■□□□□ 0.59
APTX-221ENST00000477119 BCL9O00512 1426 aa18.74■□□□□ 0.59
APTX-221ENST00000477119 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
APTX-221ENST00000477119 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
APTX-221ENST00000477119 FYB1O15117 783 aa18.72■□□□□ 0.59
APTX-221ENST00000477119 KCNQ2O43526 872 aa18.72■□□□□ 0.59
APTX-221ENST00000477119 AMPHP49418 695 aa18.72■□□□□ 0.59
APTX-221ENST00000477119 PROM2Q8N271 834 aa18.72■□□□□ 0.59
APTX-221ENST00000477119 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
APTX-221ENST00000477119 TNS2Q63HR2 1409 aa18.72■□□□□ 0.59
APTX-221ENST00000477119 RREB1Q92766 1687 aa18.7■□□□□ 0.58
APTX-221ENST00000477119 WNK3Q9BYP7 1800 aa18.7■□□□□ 0.58
APTX-221ENST00000477119 HOXC9P31274 260 aa18.7■□□□□ 0.58
APTX-221ENST00000477119 ACSBG1Q96GR2 724 aa18.7■□□□□ 0.58
APTX-221ENST00000477119 CLSPNQ9HAW4 1339 aa18.7■□□□□ 0.58
APTX-221ENST00000477119 NUP188Q5SRE5 1749 aa18.69■□□□□ 0.58
APTX-221ENST00000477119 LTN1O94822 1766 aa18.69■□□□□ 0.58
APTX-221ENST00000477119 RRS1Q15050 365 aaKnown RBP18.68■□□□□ 0.58
APTX-221ENST00000477119 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
APTX-221ENST00000477119 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
APTX-221ENST00000477119 ANO8Q9HCE9 1232 aaPredicted RBP18.67■□□□□ 0.58
APTX-221ENST00000477119 CARD14Q9BXL6 1004 aa18.66■□□□□ 0.58
APTX-221ENST00000477119 SPON1Q9HCB6 807 aa18.66■□□□□ 0.58
APTX-221ENST00000477119 SBF2Q86WG5 1849 aa18.65■□□□□ 0.58
APTX-221ENST00000477119 PDGFDQ9GZP0 370 aaPredicted RBP18.63■□□□□ 0.57
APTX-221ENST00000477119 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
APTX-221ENST00000477119 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
APTX-221ENST00000477119 PPP1R1BQ9UD71 204 aaPredicted RBP18.62■□□□□ 0.57
APTX-221ENST00000477119 RGPD3A6NKT7 1758 aaPredicted RBP18.61■□□□□ 0.57
APTX-221ENST00000477119 RGPD4Q7Z3J3 1758 aa18.61■□□□□ 0.57
APTX-221ENST00000477119 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
APTX-221ENST00000477119 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
APTX-221ENST00000477119 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
APTX-221ENST00000477119 POLR3GLQ9BT43 218 aa18.61■□□□□ 0.57
APTX-221ENST00000477119 SLC15A2Q16348 729 aa18.6■□□□□ 0.57
APTX-221ENST00000477119 HSP90AB2PQ58FF8 381 aa18.6■□□□□ 0.57
APTX-221ENST00000477119 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
APTX-221ENST00000477119 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
APTX-221ENST00000477119 ZBTB7AO95365 584 aa18.59■□□□□ 0.57
APTX-221ENST00000477119 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
APTX-221ENST00000477119 PRIM1P49642 420 aaKnown RBP18.58■□□□□ 0.56
APTX-221ENST00000477119 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.56
APTX-221ENST00000477119 NHSQ6T4R5 1651 aa18.57■□□□□ 0.56
APTX-221ENST00000477119 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
APTX-221ENST00000477119 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
APTX-221ENST00000477119 INSRP06213 1382 aa18.56■□□□□ 0.56
APTX-221ENST00000477119 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
APTX-221ENST00000477119 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
APTX-221ENST00000477119 ATF5Q9Y2D1 282 aaPredicted RBP18.56■□□□□ 0.56
APTX-221ENST00000477119 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms