RNA–Protein interactions for RNA: ENST00000476635.5

PRKCI-202, Transcript of protein kinase C iota, humanhuman

TSL 1 (best)

Gene PRKCI, Length 3,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-202ENST00000476635 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
PRKCI-202ENST00000476635 LRP6O75581 1613 aa8.57□□□□□ -1.04
PRKCI-202ENST00000476635 CT47B1P0C2W7 299 aaPredicted RBP8.57□□□□□ -1.04
PRKCI-202ENST00000476635 BCANQ96GW7 911 aa8.57□□□□□ -1.04
PRKCI-202ENST00000476635 DIAPH1O60610 1272 aaKnown RBP8.57□□□□□ -1.04
PRKCI-202ENST00000476635 UBR2Q8IWV8 1755 aa8.57□□□□□ -1.04
PRKCI-202ENST00000476635 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
PRKCI-202ENST00000476635 KCNH5Q8NCM2 988 aa8.56□□□□□ -1.04
PRKCI-202ENST00000476635 PROSER2Q86WR7 435 aaPredicted RBP8.56□□□□□ -1.04
PRKCI-202ENST00000476635 PHLPP1O60346 1717 aa8.56□□□□□ -1.04
PRKCI-202ENST00000476635 BRPF1P55201 1214 aaPredicted RBP8.56□□□□□ -1.04
PRKCI-202ENST00000476635 GLI3P10071 1580 aa8.55□□□□□ -1.04
PRKCI-202ENST00000476635 E9PSI1 815 aa8.55□□□□□ -1.04
PRKCI-202ENST00000476635 MAP3K19Q56UN5 1328 aa8.55□□□□□ -1.04
PRKCI-202ENST00000476635 SPATA31A3Q5VYP0 1347 aa8.55□□□□□ -1.04
PRKCI-202ENST00000476635 NPHP3Q7Z494 1330 aa8.55□□□□□ -1.04
PRKCI-202ENST00000476635 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
PRKCI-202ENST00000476635 LAMB4A4D0S4 1761 aa8.54□□□□□ -1.04
PRKCI-202ENST00000476635 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
PRKCI-202ENST00000476635 HTATSF1O43719 755 aaKnown RBP8.54□□□□□ -1.04
PRKCI-202ENST00000476635 ZNF853P0CG23 659 aa8.54□□□□□ -1.04
PRKCI-202ENST00000476635 YTHDC1Q96MU7 727 aaKnown RBP8.54□□□□□ -1.04
PRKCI-202ENST00000476635 PSME1Q06323 249 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 IP6K1Q92551 441 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 CRB1P82279 1406 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 EIF4A2Q14240 407 aaKnown RBP8.53□□□□□ -1.04
PRKCI-202ENST00000476635 ZRANB1Q9UGI0 708 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 HOXC9P31274 260 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 ARHGEF25Q86VW2 580 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 BABAM1Q9NWV8 329 aa8.53□□□□□ -1.04
PRKCI-202ENST00000476635 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.04
PRKCI-202ENST00000476635 IBTKQ9P2D0 1353 aaPredicted RBP8.52□□□□□ -1.05
PRKCI-202ENST00000476635 GOLGA2Q08379 1002 aa8.52□□□□□ -1.05
PRKCI-202ENST00000476635 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
PRKCI-202ENST00000476635 SOS1Q07889 1333 aaPredicted RBP8.52□□□□□ -1.05
PRKCI-202ENST00000476635 TMPOP42166 694 aaKnown RBP8.52□□□□□ -1.05
PRKCI-202ENST00000476635 BRINP3Q76B58 766 aa8.52□□□□□ -1.05
PRKCI-202ENST00000476635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRKCI-202ENST00000476635 ZNF335Q9H4Z2 1342 aaPredicted RBP8.51□□□□□ -1.05
PRKCI-202ENST00000476635 HSPA2P54652 639 aa8.51□□□□□ -1.05
PRKCI-202ENST00000476635 NFE2L2Q16236 605 aa8.51□□□□□ -1.05
PRKCI-202ENST00000476635 TCP11L2Q8N4U5 519 aa8.51□□□□□ -1.05
PRKCI-202ENST00000476635 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
PRKCI-202ENST00000476635 CEMIPQ8WUJ3 1361 aa8.51□□□□□ -1.05
PRKCI-202ENST00000476635 KIAA0232Q92628 1395 aa8.51□□□□□ -1.05
PRKCI-202ENST00000476635 ATF3P18847 181 aa8.5□□□□□ -1.05
PRKCI-202ENST00000476635 ORAI2Q96SN7 254 aa8.5□□□□□ -1.05
PRKCI-202ENST00000476635 KRT28Q7Z3Y7 464 aa8.5□□□□□ -1.05
PRKCI-202ENST00000476635 PMFBP1Q8TBY8 1022 aa8.5□□□□□ -1.05
PRKCI-202ENST00000476635 RREB1Q92766 1687 aa8.5□□□□□ -1.05
PRKCI-202ENST00000476635 APAF1O14727 1248 aa8.49□□□□□ -1.05
PRKCI-202ENST00000476635 COL5A2P05997 1499 aaPredicted RBP8.49□□□□□ -1.05
PRKCI-202ENST00000476635 LMOD3Q0VAK6 560 aa8.49□□□□□ -1.05
PRKCI-202ENST00000476635 ESCO1Q5FWF5 840 aa8.49□□□□□ -1.05
PRKCI-202ENST00000476635 TOGARAM1Q9Y4F4 1720 aa8.49□□□□□ -1.05
PRKCI-202ENST00000476635 DISP2A7MBM2 1401 aa8.48□□□□□ -1.05
PRKCI-202ENST00000476635 CALD1Q05682 793 aaKnown RBP8.48□□□□□ -1.05
PRKCI-202ENST00000476635 AAMPQ13685 434 aa8.48□□□□□ -1.05
PRKCI-202ENST00000476635 IFT57Q9NWB7 429 aa8.48□□□□□ -1.05
PRKCI-202ENST00000476635 SUPT16HQ9Y5B9 1047 aaKnown RBP8.48□□□□□ -1.05
PRKCI-202ENST00000476635 GTF3C3Q9Y5Q9 886 aa8.48□□□□□ -1.05
PRKCI-202ENST00000476635 RRP1P56182 461 aaKnown RBP8.47□□□□□ -1.05
PRKCI-202ENST00000476635 SLAIN2Q9P270 581 aa8.47□□□□□ -1.05
PRKCI-202ENST00000476635 NLRP6P59044 892 aa8.47□□□□□ -1.05
PRKCI-202ENST00000476635 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
PRKCI-202ENST00000476635 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
PRKCI-202ENST00000476635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.056e-9■■■□□ 18.9
PRKCI-202ENST00000476635 GCP02774 474 aa8.47□□□□□ -1.05
PRKCI-202ENST00000476635 U2AF1L5P0DN76 240 aaPredicted RBP8.47□□□□□ -1.05
PRKCI-202ENST00000476635 U2AF1Q01081 240 aaKnown RBP eCLIP8.47□□□□□ -1.05
PRKCI-202ENST00000476635 RRS1Q15050 365 aaKnown RBP8.47□□□□□ -1.05
PRKCI-202ENST00000476635 HEG1Q9ULI3 1381 aa8.46□□□□□ -1.05
PRKCI-202ENST00000476635 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.05
PRKCI-202ENST00000476635 RCAN3Q9UKA8 241 aa8.46□□□□□ -1.05
PRKCI-202ENST00000476635 THSD7AQ9UPZ6 1657 aa8.46□□□□□ -1.05
PRKCI-202ENST00000476635 PXDNLA1KZ92 1463 aa8.46□□□□□ -1.06
PRKCI-202ENST00000476635 C5P01031 1676 aa8.46□□□□□ -1.06
PRKCI-202ENST00000476635 ALDH1L2Q3SY69 923 aa8.46□□□□□ -1.06
PRKCI-202ENST00000476635 HSP90AB2PQ58FF8 381 aa8.45□□□□□ -1.06
PRKCI-202ENST00000476635 EYA1Q99502 592 aa8.45□□□□□ -1.06
PRKCI-202ENST00000476635 ERBB3P21860 1342 aa8.45□□□□□ -1.06
PRKCI-202ENST00000476635 PRKAR2BP31323 418 aa8.45□□□□□ -1.06
PRKCI-202ENST00000476635 CDCA7LQ96GN5 454 aa8.45□□□□□ -1.06
PRKCI-202ENST00000476635 MAP3K5Q99683 1374 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 PHACTR3Q96KR7 559 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 SENP3Q9H4L4 574 aaPredicted RBP8.44□□□□□ -1.06
PRKCI-202ENST00000476635 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 MAPK8IP3Q9UPT6 1336 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 CCDC146Q8IYE0 955 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 SLIT2O94813 1529 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 CFAP44Q96MT7 982 aa8.44□□□□□ -1.06
PRKCI-202ENST00000476635 PDE3AQ14432 1141 aa8.43□□□□□ -1.06
PRKCI-202ENST00000476635 ITGB4P16144 1822 aa8.43□□□□□ -1.06
PRKCI-202ENST00000476635 CHL1O00533 1208 aa8.43□□□□□ -1.06
PRKCI-202ENST00000476635 MEGF6O75095 1541 aa8.43□□□□□ -1.06
PRKCI-202ENST00000476635 TNNT2P45379 298 aaPredicted RBP8.43□□□□□ -1.06
PRKCI-202ENST00000476635 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
PRKCI-202ENST00000476635 RGS12O14924 1447 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms