RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 WDR17Q8IZU2 1322 aa9.99□□□□□ -0.81
HDAC3-207ENST00000475549 ST20-MTHFSA0A0A6YYL1 179 aa9.98□□□□□ -0.81
HDAC3-207ENST00000475549 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-207ENST00000475549 TMC1Q8TDI8 760 aa9.98□□□□□ -0.81
HDAC3-207ENST00000475549 PIK3C2AO00443 1686 aa9.98□□□□□ -0.81
HDAC3-207ENST00000475549 USP31Q70CQ4 1352 aa9.98□□□□□ -0.81
HDAC3-207ENST00000475549 TONSLQ96HA7 1378 aa9.98□□□□□ -0.81
HDAC3-207ENST00000475549 DDB1Q16531 1140 aa9.97□□□□□ -0.81
HDAC3-207ENST00000475549 PROM2Q8N271 834 aa9.97□□□□□ -0.81
HDAC3-207ENST00000475549 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
HDAC3-207ENST00000475549 CARD10Q9BWT7 1032 aa9.97□□□□□ -0.81
HDAC3-207ENST00000475549 NFAT5O94916 1531 aa9.96□□□□□ -0.82
HDAC3-207ENST00000475549 COL18A1P39060 1754 aa9.96□□□□□ -0.82
HDAC3-207ENST00000475549 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
HDAC3-207ENST00000475549 FBLN1P23142 703 aa9.95□□□□□ -0.82
HDAC3-207ENST00000475549 A0A1W2PP64 1363 aa9.95□□□□□ -0.82
HDAC3-207ENST00000475549 TNS1Q9HBL0 1735 aaKnown RBP9.94□□□□□ -0.82
HDAC3-207ENST00000475549 PARD3Q8TEW0 1356 aa9.94□□□□□ -0.82
HDAC3-207ENST00000475549 HDGFL2Q7Z4V5 671 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-207ENST00000475549 CDCA7Q9BWT1 371 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-207ENST00000475549 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-207ENST00000475549 OVOS2A0A0G2JMS6 1433 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 OVOS2A0A0J9YW53 1432 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 OVOS2Q6IE36 1432 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 ERBB3P21860 1342 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-207ENST00000475549 EXOC5O00471 708 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 PLSCR1O15162 318 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 KCNQ2O43526 872 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 TERF2IPQ9NYB0 399 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 RGPD1P0DJD0 1748 aa9.93□□□□□ -0.82
HDAC3-207ENST00000475549 BCL9O00512 1426 aa9.92□□□□□ -0.82
HDAC3-207ENST00000475549 EDC4Q6P2E9 1401 aaKnown RBP9.92□□□□□ -0.82
HDAC3-207ENST00000475549 PDGFDQ9GZP0 370 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-207ENST00000475549 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-207ENST00000475549 NLRP2Q9NX02 1062 aa9.92□□□□□ -0.82
HDAC3-207ENST00000475549 PEAK1Q9H792 1746 aa9.91□□□□□ -0.82
HDAC3-207ENST00000475549 PARP4Q9UKK3 1724 aaKnown RBP9.91□□□□□ -0.82
HDAC3-207ENST00000475549 NBPF14Q5TI25 921 aa9.91□□□□□ -0.82
HDAC3-207ENST00000475549 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
HDAC3-207ENST00000475549 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
HDAC3-207ENST00000475549 AKAP12Q02952 1782 aa9.91□□□□□ -0.82
HDAC3-207ENST00000475549 CCDC7Q96M83 1385 aa9.9□□□□□ -0.82
HDAC3-207ENST00000475549 LRRC37A3O60309 1634 aa9.9□□□□□ -0.82
HDAC3-207ENST00000475549 IP6K1Q92551 441 aa9.9□□□□□ -0.82
HDAC3-207ENST00000475549 LRP5O75197 1615 aa9.89□□□□□ -0.83
HDAC3-207ENST00000475549 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
HDAC3-207ENST00000475549 FYB1O15117 783 aa9.89□□□□□ -0.83
HDAC3-207ENST00000475549 IL2RBP14784 551 aa9.89□□□□□ -0.83
HDAC3-207ENST00000475549 TXNRD1Q16881 649 aa9.89□□□□□ -0.83
HDAC3-207ENST00000475549 MON2Q7Z3U7 1717 aa9.88□□□□□ -0.83
HDAC3-207ENST00000475549 LTV1Q96GA3 475 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-207ENST00000475549 ACSBG1Q96GR2 724 aa9.88□□□□□ -0.83
HDAC3-207ENST00000475549 CARD14Q9BXL6 1004 aa9.88□□□□□ -0.83
HDAC3-207ENST00000475549 USP47Q96K76 1375 aa9.88□□□□□ -0.83
HDAC3-207ENST00000475549 NINLQ9Y2I6 1382 aa9.88□□□□□ -0.83
HDAC3-207ENST00000475549 HOXC9P31274 260 aa9.87□□□□□ -0.83
HDAC3-207ENST00000475549 COG3Q96JB2 828 aa9.87□□□□□ -0.83
HDAC3-207ENST00000475549 GGNBP2Q9H3C7 697 aa9.87□□□□□ -0.83
HDAC3-207ENST00000475549 ANKRD36BQ8N2N9 1353 aa9.87□□□□□ -0.83
HDAC3-207ENST00000475549 ABCC6O95255 1503 aa9.87□□□□□ -0.83
HDAC3-207ENST00000475549 SLC24A1O60721 1099 aa9.86□□□□□ -0.83
HDAC3-207ENST00000475549 TMF1P82094 1093 aa9.86□□□□□ -0.83
HDAC3-207ENST00000475549 RRS1Q15050 365 aaKnown RBP9.86□□□□□ -0.83
HDAC3-207ENST00000475549 NBPF6Q5VWK0 638 aa9.86□□□□□ -0.83
HDAC3-207ENST00000475549 TNS2Q63HR2 1409 aa9.86□□□□□ -0.83
HDAC3-207ENST00000475549 NBPF4Q96M43 638 aa9.86□□□□□ -0.83
HDAC3-207ENST00000475549 RREB1Q92766 1687 aa9.86□□□□□ -0.83
HDAC3-207ENST00000475549 AMPHP49418 695 aa9.85□□□□□ -0.83
HDAC3-207ENST00000475549 DDX54Q8TDD1 881 aaKnown RBP9.85□□□□□ -0.83
HDAC3-207ENST00000475549 SPON1Q9HCB6 807 aa9.85□□□□□ -0.83
HDAC3-207ENST00000475549 LRRC4BQ9NT99 713 aa9.85□□□□□ -0.83
HDAC3-207ENST00000475549 USP54Q70EL1 1684 aa9.85□□□□□ -0.83
HDAC3-207ENST00000475549 NUP188Q5SRE5 1749 aa9.85□□□□□ -0.83
HDAC3-207ENST00000475549 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 ZBTB7AO95365 584 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 PTGER2P43116 358 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 SLC15A2Q16348 729 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 HSP90AB2PQ58FF8 381 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 PCGF6Q9BYE7 350 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 TIMELESSQ9UNS1 1208 aa9.84□□□□□ -0.83
HDAC3-207ENST00000475549 KCNA4P22459 653 aa9.83□□□□□ -0.84
HDAC3-207ENST00000475549 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
HDAC3-207ENST00000475549 KCNQ4P56696 695 aa9.82□□□□□ -0.84
HDAC3-207ENST00000475549 ZNF827Q17R98 1081 aa9.82□□□□□ -0.84
HDAC3-207ENST00000475549 USHBP1Q8N6Y0 703 aa9.82□□□□□ -0.84
HDAC3-207ENST00000475549 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
HDAC3-207ENST00000475549 SGIP1Q9BQI5 828 aa9.82□□□□□ -0.84
HDAC3-207ENST00000475549 ATF5Q9Y2D1 282 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-207ENST00000475549 UTRNP46939 3433 aa9.82□□□□□ -0.84
HDAC3-207ENST00000475549 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
HDAC3-207ENST00000475549 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
HDAC3-207ENST00000475549 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
HDAC3-207ENST00000475549 PPP1R1BQ9UD71 204 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-207ENST00000475549 EMILIN1Q9Y6C2 1016 aa9.8□□□□□ -0.84
HDAC3-207ENST00000475549 MEGF6O75095 1541 aa9.8□□□□□ -0.84
HDAC3-207ENST00000475549 CLSPNQ9HAW4 1339 aa9.8□□□□□ -0.84
HDAC3-207ENST00000475549 WNK3Q9BYP7 1800 aa9.79□□□□□ -0.84
HDAC3-207ENST00000475549 RTL1A6NKG5 1358 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms