RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
CPSF7-210ENST00000474684 PPIP5K1Q6PFW1 1433 aa8.61□□□□□ -1.03
CPSF7-210ENST00000474684 LRRC37A3O60309 1634 aa8.61□□□□□ -1.03
CPSF7-210ENST00000474684 SLIT3O75094 1523 aa8.6□□□□□ -1.03
CPSF7-210ENST00000474684 RREB1Q92766 1687 aa8.6□□□□□ -1.03
CPSF7-210ENST00000474684 CAMTA1Q9Y6Y1 1673 aa8.6□□□□□ -1.03
CPSF7-210ENST00000474684 L3MBTL2Q969R5 705 aa8.6□□□□□ -1.03
CPSF7-210ENST00000474684 CDK19Q9BWU1 502 aa8.6□□□□□ -1.03
CPSF7-210ENST00000474684 KIAA0232Q92628 1395 aa8.6□□□□□ -1.03
CPSF7-210ENST00000474684 SRCAPQ6ZRS2 3230 aa8.59□□□□□ -1.03
CPSF7-210ENST00000474684 CENPJQ9HC77 1338 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-210ENST00000474684 FAM83GA6ND36 823 aa8.59□□□□□ -1.03
CPSF7-210ENST00000474684 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
CPSF7-210ENST00000474684 VPS72Q15906 364 aa8.59□□□□□ -1.03
CPSF7-210ENST00000474684 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
CPSF7-210ENST00000474684 STAC3Q96MF2 364 aa8.59□□□□□ -1.03
CPSF7-210ENST00000474684 NUP188Q5SRE5 1749 aa8.59□□□□□ -1.03
CPSF7-210ENST00000474684 ACEP12821 1306 aa8.58□□□□□ -1.04
CPSF7-210ENST00000474684 PEAK1Q9H792 1746 aa8.58□□□□□ -1.04
CPSF7-210ENST00000474684 USP6P35125 1406 aa8.58□□□□□ -1.04
CPSF7-210ENST00000474684 NUTM2GQ5VZR2 741 aa8.58□□□□□ -1.04
CPSF7-210ENST00000474684 USP19O94966 1318 aa8.57□□□□□ -1.04
CPSF7-210ENST00000474684 BLMP54132 1417 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-210ENST00000474684 SEPT12Q8IYM1 358 aa8.57□□□□□ -1.04
CPSF7-210ENST00000474684 CABP2Q9NPB3 220 aa8.57□□□□□ -1.04
CPSF7-210ENST00000474684 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
CPSF7-210ENST00000474684 SSH2Q76I76 1423 aa8.56□□□□□ -1.04
CPSF7-210ENST00000474684 RGPD2P0DJD1 1756 aa8.56□□□□□ -1.04
CPSF7-210ENST00000474684 NFAT5O94916 1531 aa8.56□□□□□ -1.04
CPSF7-210ENST00000474684 LRP5O75197 1615 aa8.56□□□□□ -1.04
CPSF7-210ENST00000474684 CHRNA2Q15822 529 aa8.56□□□□□ -1.04
CPSF7-210ENST00000474684 NBPF8Q3BBV2 869 aa8.56□□□□□ -1.04
CPSF7-210ENST00000474684 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
CPSF7-210ENST00000474684 ROCK2O75116 1388 aaKnown RBP8.56□□□□□ -1.04
CPSF7-210ENST00000474684 SPATA31A5Q5VU36 1347 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 SPATA31A7Q8IWB4 1347 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 ATN1P54259 1190 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-210ENST00000474684 SRPK2P78362 688 aaKnown RBP8.55□□□□□ -1.04
CPSF7-210ENST00000474684 NEUROD1Q13562 356 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 FAM98CQ17RN3 349 aaKnown RBP8.55□□□□□ -1.04
CPSF7-210ENST00000474684 DEFB132Q7Z7B7 95 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 PRDM11Q9NQV5 511 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 CCDC61Q9Y6R9 512 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 COL5A2P05997 1499 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-210ENST00000474684 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 KAT6BQ8WYB5 2073 aa8.55□□□□□ -1.04
CPSF7-210ENST00000474684 RGPD3A6NKT7 1758 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-210ENST00000474684 RGPD4Q7Z3J3 1758 aa8.54□□□□□ -1.04
CPSF7-210ENST00000474684 MYOM1P52179 1685 aa8.54□□□□□ -1.04
CPSF7-210ENST00000474684 A0A0G2JS52 829 aa8.54□□□□□ -1.04
CPSF7-210ENST00000474684 MYT1Q01538 1121 aa8.54□□□□□ -1.04
CPSF7-210ENST00000474684 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
CPSF7-210ENST00000474684 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
CPSF7-210ENST00000474684 CPDO75976 1380 aa8.53□□□□□ -1.04
CPSF7-210ENST00000474684 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-210ENST00000474684 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
CPSF7-210ENST00000474684 KRT27Q7Z3Y8 459 aa8.53□□□□□ -1.04
CPSF7-210ENST00000474684 CDAN1Q8IWY9 1227 aa8.53□□□□□ -1.04
CPSF7-210ENST00000474684 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
CPSF7-210ENST00000474684 SPATA31A1Q5TZJ5 1347 aa8.53□□□□□ -1.04
CPSF7-210ENST00000474684 SBNO2Q9Y2G9 1366 aa8.52□□□□□ -1.05
CPSF7-210ENST00000474684 TIE1P35590 1138 aa8.52□□□□□ -1.05
CPSF7-210ENST00000474684 CPSF1Q10570 1443 aaKnown RBP8.52□□□□□ -1.05
CPSF7-210ENST00000474684 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
CPSF7-210ENST00000474684 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
CPSF7-210ENST00000474684 CABP1Q9NZU7 370 aa8.51□□□□□ -1.05
CPSF7-210ENST00000474684 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
CPSF7-210ENST00000474684 DISP2A7MBM2 1401 aa8.5□□□□□ -1.05
CPSF7-210ENST00000474684 ABCC6O95255 1503 aa8.49□□□□□ -1.05
CPSF7-210ENST00000474684 TONSLQ96HA7 1378 aa8.49□□□□□ -1.05
CPSF7-210ENST00000474684 LARP1Q6PKG0 1096 aaKnown RBP8.49□□□□□ -1.05
CPSF7-210ENST00000474684 KIF12Q96FN5 646 aa8.49□□□□□ -1.05
CPSF7-210ENST00000474684 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-210ENST00000474684 BMP2KQ9NSY1 1161 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-210ENST00000474684 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
CPSF7-210ENST00000474684 NHSQ6T4R5 1651 aa8.49□□□□□ -1.05
CPSF7-210ENST00000474684 EVC2Q86UK5 1308 aa8.49□□□□□ -1.05
CPSF7-210ENST00000474684 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-210ENST00000474684 CRB1P82279 1406 aa8.48□□□□□ -1.05
CPSF7-210ENST00000474684 BTAF1O14981 1849 aa8.48□□□□□ -1.05
CPSF7-210ENST00000474684 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
CPSF7-210ENST00000474684 TTC21BQ7Z4L5 1316 aa8.48□□□□□ -1.05
CPSF7-210ENST00000474684 CASZ1Q86V15 1759 aa8.48□□□□□ -1.05
CPSF7-210ENST00000474684 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 OVOS2A0A0J9YW53 1432 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 OVOS2Q6IE36 1432 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 POTEFA5A3E0 1075 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 SEC24BO95487 1268 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 GCP02774 474 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 CCDC125Q86Z20 511 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 AATKQ6ZMQ8 1374 aa8.47□□□□□ -1.05
CPSF7-210ENST00000474684 KTN1Q86UP2 1357 aaKnown RBP8.47□□□□□ -1.05
CPSF7-210ENST00000474684 PSDA5PKW4 1024 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-210ENST00000474684 SOX12O15370 315 aa8.46□□□□□ -1.06
CPSF7-210ENST00000474684 NLRP6P59044 892 aa8.46□□□□□ -1.06
CPSF7-210ENST00000474684 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms