RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.42■■■□□ 2.37e-7■■□□□ 13.6
ARF1-206ENST00000473949 TMC1Q8TDI8 760 aa29.42■■■□□ 2.3
ARF1-206ENST00000473949 WDR17Q8IZU2 1322 aa29.42■■■□□ 2.3
ARF1-206ENST00000473949 C11orf95C9JLR9 678 aaPredicted RBP29.4■■■□□ 2.3
ARF1-206ENST00000473949 DDB1Q16531 1140 aa29.4■■■□□ 2.3
ARF1-206ENST00000473949 MON2Q7Z3U7 1717 aa29.39■■■□□ 2.3
ARF1-206ENST00000473949 OVOS2A0A0G2JMS6 1433 aa29.38■■■□□ 2.29
ARF1-206ENST00000473949 OVOS2A0A0J9YW53 1432 aa29.38■■■□□ 2.29
ARF1-206ENST00000473949 OVOS2Q6IE36 1432 aa29.38■■■□□ 2.29
ARF1-206ENST00000473949 LRRC37A3O60309 1634 aa29.38■■■□□ 2.29
ARF1-206ENST00000473949 RGPD5Q99666 1765 aa29.36■■■□□ 2.29
ARF1-206ENST00000473949 HDGFL2Q7Z4V5 671 aaPredicted RBP29.36■■■□□ 2.29
ARF1-206ENST00000473949 NFAT5O94916 1531 aa29.35■■■□□ 2.29
ARF1-206ENST00000473949 CDCA7Q9BWT1 371 aaPredicted RBP29.34■■■□□ 2.29
ARF1-206ENST00000473949 RREB1Q92766 1687 aa29.34■■■□□ 2.29
ARF1-206ENST00000473949 NBPF14Q5TI25 921 aa29.33■■■□□ 2.29
ARF1-206ENST00000473949 NME9Q86XW9 330 aa29.33■■■□□ 2.29
ARF1-206ENST00000473949 CARD10Q9BWT7 1032 aa29.33■■■□□ 2.29
ARF1-206ENST00000473949 SLC12A5Q9H2X9 1139 aa29.33■■■□□ 2.29
ARF1-206ENST00000473949 WNK3Q9BYP7 1800 aa29.32■■■□□ 2.28
ARF1-206ENST00000473949 CD163L1Q9NR16 1453 aa29.31■■■□□ 2.28
ARF1-206ENST00000473949 NUP188Q5SRE5 1749 aa29.31■■■□□ 2.28
ARF1-206ENST00000473949 PEAK1Q9H792 1746 aa29.31■■■□□ 2.28
ARF1-206ENST00000473949 USP31Q70CQ4 1352 aa29.3■■■□□ 2.28
ARF1-206ENST00000473949 TERF2IPQ9NYB0 399 aa29.3■■■□□ 2.28
ARF1-206ENST00000473949 ABCC6O95255 1503 aa29.27■■■□□ 2.28
ARF1-206ENST00000473949 MARCH10Q8NA82 808 aaPredicted RBP29.27■■■□□ 2.28
ARF1-206ENST00000473949 EDC4Q6P2E9 1401 aaKnown RBP29.27■■■□□ 2.28
ARF1-206ENST00000473949 CCDC7Q96M83 1385 aa29.26■■■□□ 2.28
ARF1-206ENST00000473949 SBF2Q86WG5 1849 aa29.25■■■□□ 2.27
ARF1-206ENST00000473949 EXOC5O00471 708 aa29.25■■■□□ 2.27
ARF1-206ENST00000473949 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
ARF1-206ENST00000473949 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
ARF1-206ENST00000473949 USP54Q70EL1 1684 aa29.25■■■□□ 2.27
ARF1-206ENST00000473949 PUS7Q96PZ0 661 aaKnown RBP29.24■■■□□ 2.27
ARF1-206ENST00000473949 BCL11BQ9C0K0 894 aaPredicted RBP29.24■■■□□ 2.27
ARF1-206ENST00000473949 ST20-MTHFSA0A0A6YYL1 179 aa29.23■■■□□ 2.27
ARF1-206ENST00000473949 PLSCR1O15162 318 aa29.22■■■□□ 2.27
ARF1-206ENST00000473949 NLRP2Q9NX02 1062 aa29.22■■■□□ 2.27
ARF1-206ENST00000473949 LTN1O94822 1766 aa29.21■■■□□ 2.27
ARF1-206ENST00000473949 PTF1AQ7RTS3 328 aa29.21■■■□□ 2.27
ARF1-206ENST00000473949 ERBB3P21860 1342 aa29.2■■■□□ 2.27
ARF1-206ENST00000473949 TESK2Q96S53 571 aa29.19■■■□□ 2.26
ARF1-206ENST00000473949 RGPD3A6NKT7 1758 aaPredicted RBP29.18■■■□□ 2.26
ARF1-206ENST00000473949 RGPD4Q7Z3J3 1758 aa29.18■■■□□ 2.26
ARF1-206ENST00000473949 NINLQ9Y2I6 1382 aa29.18■■■□□ 2.26
ARF1-206ENST00000473949 BCL9O00512 1426 aa29.18■■■□□ 2.26
ARF1-206ENST00000473949 SLC24A1O60721 1099 aa29.17■■■□□ 2.26
ARF1-206ENST00000473949 ANKRD24Q8TF21 1146 aa29.17■■■□□ 2.26
ARF1-206ENST00000473949 TNS2Q63HR2 1409 aa29.17■■■□□ 2.26
ARF1-206ENST00000473949 IL2RBP14784 551 aa29.13■■■□□ 2.25
ARF1-206ENST00000473949 COG3Q96JB2 828 aa29.12■■■□□ 2.25
ARF1-206ENST00000473949 SPON1Q9HCB6 807 aa29.11■■■□□ 2.25
ARF1-206ENST00000473949 ANO8Q9HCE9 1232 aaPredicted RBP29.11■■■□□ 2.25
ARF1-206ENST00000473949 PPP1R1BQ9UD71 204 aaPredicted RBP29.1■■■□□ 2.25
ARF1-206ENST00000473949 IP6K1Q92551 441 aa29.09■■■□□ 2.25
ARF1-206ENST00000473949 LTV1Q96GA3 475 aaPredicted RBP29.09■■■□□ 2.25
ARF1-206ENST00000473949 ACSBG1Q96GR2 724 aa29.09■■■□□ 2.25
ARF1-206ENST00000473949 KCNQ2O43526 872 aa29.08■■■□□ 2.25
ARF1-206ENST00000473949 TMF1P82094 1093 aa29.08■■■□□ 2.25
ARF1-206ENST00000473949 PROM2Q8N271 834 aa29.08■■■□□ 2.25
ARF1-206ENST00000473949 USP47Q96K76 1375 aa29.07■■■□□ 2.24
ARF1-206ENST00000473949 ANKRD36BQ8N2N9 1353 aa29.06■■■□□ 2.24
ARF1-206ENST00000473949 TXNRD1Q16881 649 aa29.06■■■□□ 2.24
ARF1-206ENST00000473949 AMPHP49418 695 aa29.04■■■□□ 2.24
ARF1-206ENST00000473949 NHSQ6T4R5 1651 aa29.03■■■□□ 2.24
ARF1-206ENST00000473949 STK32BQ9NY57 414 aa29.03■■■□□ 2.24
ARF1-206ENST00000473949 MAP3K19Q56UN5 1328 aa29.02■■■□□ 2.24
ARF1-206ENST00000473949 FBLN1P23142 703 aa29.01■■■□□ 2.23
ARF1-206ENST00000473949 FAM208AQ9UK61 1670 aaKnown RBP29■■■□□ 2.23
ARF1-206ENST00000473949 HOXC9P31274 260 aa29■■■□□ 2.23
ARF1-206ENST00000473949 DDX54Q8TDD1 881 aaKnown RBP28.99■■■□□ 2.23
ARF1-206ENST00000473949 PDGFDQ9GZP0 370 aaPredicted RBP28.98■■■□□ 2.23
ARF1-206ENST00000473949 KAT6BQ8WYB5 2073 aa28.98■■■□□ 2.23
ARF1-206ENST00000473949 CDCA8Q53HL2 280 aa28.97■■■□□ 2.23
ARF1-206ENST00000473949 GGNBP2Q9H3C7 697 aa28.97■■■□□ 2.23
ARF1-206ENST00000473949 CASZ1Q86V15 1759 aa28.97■■■□□ 2.23
ARF1-206ENST00000473949 ZBTB7AO95365 584 aa28.96■■■□□ 2.23
ARF1-206ENST00000473949 SLC15A2Q16348 729 aa28.96■■■□□ 2.23
ARF1-206ENST00000473949 RRS1Q15050 365 aaKnown RBP28.95■■■□□ 2.22
ARF1-206ENST00000473949 FYB1O15117 783 aa28.94■■■□□ 2.22
ARF1-206ENST00000473949 BTAF1O14981 1849 aa28.94■■■□□ 2.22
ARF1-206ENST00000473949 RTL1A6NKG5 1358 aa28.91■■■□□ 2.22
ARF1-206ENST00000473949 ATF5Q9Y2D1 282 aaPredicted RBP28.91■■■□□ 2.22
ARF1-206ENST00000473949 DCAF8L1A6NGE4 600 aa28.9■■■□□ 2.22
ARF1-206ENST00000473949 RGPD2P0DJD1 1756 aa28.89■■■□□ 2.22
ARF1-206ENST00000473949 SYTL4Q96C24 671 aaPredicted RBP28.89■■■□□ 2.22
ARF1-206ENST00000473949 PCGF6Q9BYE7 350 aa28.89■■■□□ 2.22
ARF1-206ENST00000473949 SMG6Q86US8 1419 aaKnown RBP28.87■■■□□ 2.21
ARF1-206ENST00000473949 ZCRB1Q8TBF4 217 aaKnown RBP28.87■■■□□ 2.21
ARF1-206ENST00000473949 KIF20BQ96Q89 1820 aa28.87■■■□□ 2.21
ARF1-206ENST00000473949 TIMELESSQ9UNS1 1208 aa28.86■■■□□ 2.21
ARF1-206ENST00000473949 USHBP1Q8N6Y0 703 aa28.85■■■□□ 2.21
ARF1-206ENST00000473949 MEGF6O75095 1541 aa28.84■■■□□ 2.21
ARF1-206ENST00000473949 NBPF6Q5VWK0 638 aa28.84■■■□□ 2.21
ARF1-206ENST00000473949 NBPF4Q96M43 638 aa28.84■■■□□ 2.21
ARF1-206ENST00000473949 MTFR1LQ9H019 292 aa28.84■■■□□ 2.21
ARF1-206ENST00000473949 PTGER2P43116 358 aa28.83■■■□□ 2.21
ARF1-206ENST00000473949 PRIM1P49642 420 aaKnown RBP28.83■■■□□ 2.21
ARF1-206ENST00000473949 PAPPAQ13219 1627 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms