RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 AP1G2O75843 785 aa9.34□□□□□ -0.91
GPCPD1-204ENST00000473797 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
GPCPD1-204ENST00000473797 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
GPCPD1-204ENST00000473797 PTK2Q05397 1052 aa9.33□□□□□ -0.92
GPCPD1-204ENST00000473797 UPP2O95045 317 aa9.32□□□□□ -0.92
GPCPD1-204ENST00000473797 RFC5P40937 340 aa9.32□□□□□ -0.92
GPCPD1-204ENST00000473797 Q6ZVU0 165 aa9.32□□□□□ -0.92
GPCPD1-204ENST00000473797 ZBTB33Q86T24 672 aa9.32□□□□□ -0.92
GPCPD1-204ENST00000473797 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
GPCPD1-204ENST00000473797 TSEN34Q9BSV6 310 aaKnown RBP9.32□□□□□ -0.92
GPCPD1-204ENST00000473797 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 USP17L8P0C7I0 530 aa9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 VSIG8P0DPA2 414 aa9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 GMPRP36959 345 aa9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
GPCPD1-204ENST00000473797 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
GPCPD1-204ENST00000473797 BMP2P12643 396 aa9.3□□□□□ -0.92
GPCPD1-204ENST00000473797 C6orf118Q5T5N4 469 aa9.3□□□□□ -0.92
GPCPD1-204ENST00000473797 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
GPCPD1-204ENST00000473797 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
GPCPD1-204ENST00000473797 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
GPCPD1-204ENST00000473797 MAN1A2O60476 641 aa9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 VEGFBP49765 207 aa9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 DHX9Q08211 1270 aaKnown RBP9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
GPCPD1-204ENST00000473797 INTS6LQ5JSJ4 861 aaKnown RBP9.27□□□□□ -0.93
GPCPD1-204ENST00000473797 PCMTD1Q96MG8 357 aaPredicted RBP9.27□□□□□ -0.93
GPCPD1-204ENST00000473797 SPINT1O43278 529 aa9.26□□□□□ -0.93
GPCPD1-204ENST00000473797 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
GPCPD1-204ENST00000473797 DNMT3LQ9UJW3 386 aa9.26□□□□□ -0.93
GPCPD1-204ENST00000473797 CBLBQ13191 982 aa9.25□□□□□ -0.93
GPCPD1-204ENST00000473797 NBPF20Q3BBV1 942 aa9.25□□□□□ -0.93
GPCPD1-204ENST00000473797 ESPNB1AK53 854 aa9.24□□□□□ -0.93
GPCPD1-204ENST00000473797 PPFIA3O75145 1194 aa9.24□□□□□ -0.93
GPCPD1-204ENST00000473797 TTLL8A6PVC2 850 aa9.23□□□□□ -0.93
GPCPD1-204ENST00000473797 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
GPCPD1-204ENST00000473797 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.93
GPCPD1-204ENST00000473797 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
GPCPD1-204ENST00000473797 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
GPCPD1-204ENST00000473797 GJD4Q96KN9 370 aaPredicted RBP9.22□□□□□ -0.93
GPCPD1-204ENST00000473797 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
GPCPD1-204ENST00000473797 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
GPCPD1-204ENST00000473797 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
GPCPD1-204ENST00000473797 SOCS7O14512 581 aa9.2□□□□□ -0.94
GPCPD1-204ENST00000473797 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
GPCPD1-204ENST00000473797 LILRA1O75019 489 aa9.19□□□□□ -0.94
GPCPD1-204ENST00000473797 ERVH48-1M5A8F1 160 aa9.18□□□□□ -0.94
GPCPD1-204ENST00000473797 PTSQ03393 145 aa9.18□□□□□ -0.94
GPCPD1-204ENST00000473797 BANK1Q8NDB2 785 aa9.18□□□□□ -0.94
GPCPD1-204ENST00000473797 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
GPCPD1-204ENST00000473797 TMPRSS4Q9NRS4 437 aa9.18□□□□□ -0.94
GPCPD1-204ENST00000473797 ZBBXA8MT70 800 aa9.17□□□□□ -0.94
GPCPD1-204ENST00000473797 KDF1Q8NAX2 398 aaPredicted RBP9.17□□□□□ -0.94
GPCPD1-204ENST00000473797 ZNF784Q8NCA9 323 aaPredicted RBP9.17□□□□□ -0.94
GPCPD1-204ENST00000473797 SLC35F4A4IF30 521 aa9.16□□□□□ -0.94
GPCPD1-204ENST00000473797 ADH1AP07327 375 aa9.16□□□□□ -0.94
GPCPD1-204ENST00000473797 ADD1P35611 737 aaKnown RBP9.16□□□□□ -0.94
GPCPD1-204ENST00000473797 CCDC125Q86Z20 511 aa9.16□□□□□ -0.94
GPCPD1-204ENST00000473797 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
GPCPD1-204ENST00000473797 AGBL1Q96MI9 1066 aa9.16□□□□□ -0.94
GPCPD1-204ENST00000473797 FIGNL2A6NMB9 653 aa9.15□□□□□ -0.94
GPCPD1-204ENST00000473797 CTSOP43234 321 aaPredicted RBP9.15□□□□□ -0.94
GPCPD1-204ENST00000473797 FBXO45P0C2W1 286 aa9.14□□□□□ -0.95
GPCPD1-204ENST00000473797 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
GPCPD1-204ENST00000473797 RELBQ01201 579 aa9.14□□□□□ -0.95
GPCPD1-204ENST00000473797 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
GPCPD1-204ENST00000473797 PTGIRP43119 386 aa9.13□□□□□ -0.95
GPCPD1-204ENST00000473797 CCDC155Q8N6L0 562 aa9.13□□□□□ -0.95
GPCPD1-204ENST00000473797 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
GPCPD1-204ENST00000473797 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
GPCPD1-204ENST00000473797 GPR37L1O60883 481 aa9.11□□□□□ -0.95
GPCPD1-204ENST00000473797 GIGYF1O75420 1035 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-204ENST00000473797 ZNF395Q9H8N7 513 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-204ENST00000473797 RAB15P59190 212 aa9.1□□□□□ -0.95
GPCPD1-204ENST00000473797 NR1H3Q13133 447 aa9.1□□□□□ -0.95
GPCPD1-204ENST00000473797 FOXD4L5Q5VV16 416 aaPredicted RBP9.1□□□□□ -0.95
GPCPD1-204ENST00000473797 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 ITGA6P23229 1130 aa9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 KRT76Q01546 638 aa9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 ZNF592Q92610 1267 aa9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 POLMQ9NP87 494 aaPredicted RBP9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 PCDHB9Q9Y5E1 797 aa9.09□□□□□ -0.95
GPCPD1-204ENST00000473797 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
GPCPD1-204ENST00000473797 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
GPCPD1-204ENST00000473797 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
GPCPD1-204ENST00000473797 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
GPCPD1-204ENST00000473797 GPC1P35052 558 aa9.06□□□□□ -0.96
GPCPD1-204ENST00000473797 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
GPCPD1-204ENST00000473797 APBB1O00213 710 aa9.05□□□□□ -0.96
GPCPD1-204ENST00000473797 LYSMD3Q7Z3D4 306 aa9.05□□□□□ -0.96
GPCPD1-204ENST00000473797 SNRKQ9NRH2 765 aa9.05□□□□□ -0.96
GPCPD1-204ENST00000473797 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
GPCPD1-204ENST00000473797 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms