RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 RGPD5Q99666 1765 aa18.34■□□□□ 0.53
TRAF4-209ENST00000473421 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
TRAF4-209ENST00000473421 SOX12O15370 315 aa18.32■□□□□ 0.52
TRAF4-209ENST00000473421 ZBTB7AO95365 584 aa18.32■□□□□ 0.52
TRAF4-209ENST00000473421 BCL11BQ9C0K0 894 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-209ENST00000473421 ARHGEF25Q86VW2 580 aa18.31■□□□□ 0.52
TRAF4-209ENST00000473421 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
TRAF4-209ENST00000473421 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
TRAF4-209ENST00000473421 PTGER2P43116 358 aa18.3■□□□□ 0.52
TRAF4-209ENST00000473421 ATF5Q9Y2D1 282 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-209ENST00000473421 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-209ENST00000473421 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
TRAF4-209ENST00000473421 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
TRAF4-209ENST00000473421 UTRNP46939 3433 aa18.29■□□□□ 0.52
TRAF4-209ENST00000473421 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
TRAF4-209ENST00000473421 BRD4O60885 1362 aaPredicted RBP18.29■□□□□ 0.52
TRAF4-209ENST00000473421 MYOM1P52179 1685 aa18.28■□□□□ 0.52
TRAF4-209ENST00000473421 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
TRAF4-209ENST00000473421 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
TRAF4-209ENST00000473421 TXNRD1Q16881 649 aa18.26■□□□□ 0.51
TRAF4-209ENST00000473421 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
TRAF4-209ENST00000473421 CARD10Q9BWT7 1032 aa18.25■□□□□ 0.51
TRAF4-209ENST00000473421 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
TRAF4-209ENST00000473421 BCL9O00512 1426 aa18.24■□□□□ 0.51
TRAF4-209ENST00000473421 NFAT5O94916 1531 aa18.23■□□□□ 0.51
TRAF4-209ENST00000473421 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
TRAF4-209ENST00000473421 SIN3AQ96ST3 1273 aa18.23■□□□□ 0.51
TRAF4-209ENST00000473421 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
TRAF4-209ENST00000473421 FHDC1Q9C0D6 1143 aaPredicted RBP18.22■□□□□ 0.51
TRAF4-209ENST00000473421 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
TRAF4-209ENST00000473421 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
TRAF4-209ENST00000473421 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
TRAF4-209ENST00000473421 EXOC5O00471 708 aa18.2■□□□□ 0.5
TRAF4-209ENST00000473421 SYT17Q9BSW7 474 aa18.2■□□□□ 0.5
TRAF4-209ENST00000473421 CDCA7Q9BWT1 371 aaPredicted RBP18.2■□□□□ 0.5
TRAF4-209ENST00000473421 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
TRAF4-209ENST00000473421 ZNF784Q8NCA9 323 aaPredicted RBP18.19■□□□□ 0.5
TRAF4-209ENST00000473421 KCNH5Q8NCM2 988 aa18.19■□□□□ 0.5
TRAF4-209ENST00000473421 STK32BQ9NY57 414 aa18.19■□□□□ 0.5
TRAF4-209ENST00000473421 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
TRAF4-209ENST00000473421 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
TRAF4-209ENST00000473421 NME9Q86XW9 330 aa18.17■□□□□ 0.5
TRAF4-209ENST00000473421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRAF4-209ENST00000473421 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
TRAF4-209ENST00000473421 TNS2Q63HR2 1409 aa18.16■□□□□ 0.5
TRAF4-209ENST00000473421 ZNF827Q17R98 1081 aa18.16■□□□□ 0.5
TRAF4-209ENST00000473421 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
TRAF4-209ENST00000473421 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
TRAF4-209ENST00000473421 NHSQ6T4R5 1651 aa18.15■□□□□ 0.5
TRAF4-209ENST00000473421 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.5
TRAF4-209ENST00000473421 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
TRAF4-209ENST00000473421 MTFR1LQ9H019 292 aa18.14■□□□□ 0.49
TRAF4-209ENST00000473421 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.49
TRAF4-209ENST00000473421 CCDC7Q96M83 1385 aa18.14■□□□□ 0.49
TRAF4-209ENST00000473421 MON2Q7Z3U7 1717 aa18.13■□□□□ 0.49
TRAF4-209ENST00000473421 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
TRAF4-209ENST00000473421 ERBB3P21860 1342 aa18.13■□□□□ 0.49
TRAF4-209ENST00000473421 ROCK2O75116 1388 aaKnown RBP18.13■□□□□ 0.49
TRAF4-209ENST00000473421 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
TRAF4-209ENST00000473421 BTAF1O14981 1849 aa18.12■□□□□ 0.49
TRAF4-209ENST00000473421 KCNQ4P56696 695 aa18.11■□□□□ 0.49
TRAF4-209ENST00000473421 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
TRAF4-209ENST00000473421 ABCC6O95255 1503 aa18.11■□□□□ 0.49
TRAF4-209ENST00000473421 LTN1O94822 1766 aa18.1■□□□□ 0.49
TRAF4-209ENST00000473421 ARXQ96QS3 562 aa18.1■□□□□ 0.49
TRAF4-209ENST00000473421 SLC12A5Q9H2X9 1139 aa18.1■□□□□ 0.49
TRAF4-209ENST00000473421 KAT6BQ8WYB5 2073 aa18.1■□□□□ 0.49
TRAF4-209ENST00000473421 IL2RBP14784 551 aa18.09■□□□□ 0.49
TRAF4-209ENST00000473421 ANKRD24Q8TF21 1146 aa18.09■□□□□ 0.49
TRAF4-209ENST00000473421 GOLGB1Q14789 3259 aaKnown RBP18.09■□□□□ 0.49
TRAF4-209ENST00000473421 USP54Q70EL1 1684 aa18.07■□□□□ 0.48
TRAF4-209ENST00000473421 FBLN1P23142 703 aa18.07■□□□□ 0.48
TRAF4-209ENST00000473421 AKT1S1Q96B36 256 aa18.07■□□□□ 0.48
TRAF4-209ENST00000473421 CHD4Q14839 1912 aa18.06■□□□□ 0.48
TRAF4-209ENST00000473421 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
TRAF4-209ENST00000473421 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
TRAF4-209ENST00000473421 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-209ENST00000473421 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
TRAF4-209ENST00000473421 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
TRAF4-209ENST00000473421 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.48
TRAF4-209ENST00000473421 A0A1W2PP64 1363 aa18.02■□□□□ 0.47
TRAF4-209ENST00000473421 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
TRAF4-209ENST00000473421 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
TRAF4-209ENST00000473421 NLGN2Q8NFZ4 835 aa18.01■□□□□ 0.47
TRAF4-209ENST00000473421 SENP3-EIF4A1A0A087X0R7 540 aa18■□□□□ 0.47
TRAF4-209ENST00000473421 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
TRAF4-209ENST00000473421 IP6K1Q92551 441 aa18■□□□□ 0.47
TRAF4-209ENST00000473421 NSD2O96028 1365 aa18■□□□□ 0.47
TRAF4-209ENST00000473421 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
TRAF4-209ENST00000473421 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
TRAF4-209ENST00000473421 COL24A1Q17RW2 1714 aa17.99■□□□□ 0.47
TRAF4-209ENST00000473421 GPR162Q16538 588 aa17.99■□□□□ 0.47
TRAF4-209ENST00000473421 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
TRAF4-209ENST00000473421 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
TRAF4-209ENST00000473421 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
TRAF4-209ENST00000473421 HDGFL2Q7Z4V5 671 aaPredicted RBP17.97■□□□□ 0.47
TRAF4-209ENST00000473421 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
TRAF4-209ENST00000473421 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
TRAF4-209ENST00000473421 QSER1Q2KHR3 1735 aa17.96■□□□□ 0.47
TRAF4-209ENST00000473421 DOT1LQ8TEK3 1739 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms