RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 TCP11L2Q8N4U5 519 aa13.31□□□□□ -0.28
APTX-217ENST00000473221 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
APTX-217ENST00000473221 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
APTX-217ENST00000473221 NFAT5O94916 1531 aa13.3□□□□□ -0.28
APTX-217ENST00000473221 NEFMP07197 916 aa13.3□□□□□ -0.28
APTX-217ENST00000473221 AMPHP49418 695 aa13.3□□□□□ -0.28
APTX-217ENST00000473221 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
APTX-217ENST00000473221 USP19O94966 1318 aa13.3□□□□□ -0.28
APTX-217ENST00000473221 PXDNQ92626 1479 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 JCADQ9P266 1359 aa13.29□□□□□ -0.28
APTX-217ENST00000473221 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
APTX-217ENST00000473221 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
APTX-217ENST00000473221 TNS3Q68CZ2 1445 aa13.28□□□□□ -0.28
APTX-217ENST00000473221 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
APTX-217ENST00000473221 SOX12O15370 315 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 GCP02774 474 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 HOXC9P31274 260 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 XPCQ01831 940 aaPredicted RBP13.27□□□□□ -0.29
APTX-217ENST00000473221 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 IP6K1Q92551 441 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 SOS2Q07890 1332 aaPredicted RBP13.27□□□□□ -0.29
APTX-217ENST00000473221 SPATA31A3Q5VYP0 1347 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 ARHGEF10O15013 1369 aa13.27□□□□□ -0.29
APTX-217ENST00000473221 SENP3-EIF4A1A0A087X0R7 540 aa13.26□□□□□ -0.29
APTX-217ENST00000473221 TMPOP42166 694 aaKnown RBP13.26□□□□□ -0.29
APTX-217ENST00000473221 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
APTX-217ENST00000473221 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
APTX-217ENST00000473221 WWC1Q8IX03 1113 aa13.26□□□□□ -0.29
APTX-217ENST00000473221 TRMT2AQ8IZ69 625 aaKnown RBP13.26□□□□□ -0.29
APTX-217ENST00000473221 ROBO1Q9Y6N7 1651 aa13.25□□□□□ -0.29
APTX-217ENST00000473221 E9PSI1 815 aa13.25□□□□□ -0.29
APTX-217ENST00000473221 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
APTX-217ENST00000473221 LMOD2Q6P5Q4 547 aa13.25□□□□□ -0.29
APTX-217ENST00000473221 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
APTX-217ENST00000473221 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
APTX-217ENST00000473221 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
APTX-217ENST00000473221 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
APTX-217ENST00000473221 SUPT16HQ9Y5B9 1047 aaKnown RBP13.24□□□□□ -0.29
APTX-217ENST00000473221 ABCC6O95255 1503 aa13.23□□□□□ -0.29
APTX-217ENST00000473221 KDRP35968 1356 aa13.23□□□□□ -0.29
APTX-217ENST00000473221 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
APTX-217ENST00000473221 NEFLP07196 543 aa13.23□□□□□ -0.29
APTX-217ENST00000473221 HMOX1P09601 288 aa13.23□□□□□ -0.29
APTX-217ENST00000473221 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
APTX-217ENST00000473221 IL16Q14005 1332 aa13.22□□□□□ -0.29
APTX-217ENST00000473221 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
APTX-217ENST00000473221 RIPK4P57078 832 aa13.22□□□□□ -0.29
APTX-217ENST00000473221 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
APTX-217ENST00000473221 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
APTX-217ENST00000473221 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
APTX-217ENST00000473221 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
APTX-217ENST00000473221 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
APTX-217ENST00000473221 RNF123Q5XPI4 1314 aa13.21□□□□□ -0.29
APTX-217ENST00000473221 RXRBP28702 533 aa13.21□□□□□ -0.29
APTX-217ENST00000473221 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
APTX-217ENST00000473221 EYA1Q99502 592 aa13.21□□□□□ -0.29
APTX-217ENST00000473221 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
APTX-217ENST00000473221 PHACTR3Q96KR7 559 aa13.2□□□□□ -0.3
APTX-217ENST00000473221 AHDC1Q5TGY3 1603 aaPredicted RBP13.2□□□□□ -0.3
APTX-217ENST00000473221 COL18A1P39060 1754 aa13.2□□□□□ -0.3
APTX-217ENST00000473221 CPDO75976 1380 aa13.2□□□□□ -0.3
APTX-217ENST00000473221 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
APTX-217ENST00000473221 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
APTX-217ENST00000473221 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
APTX-217ENST00000473221 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
APTX-217ENST00000473221 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
APTX-217ENST00000473221 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
APTX-217ENST00000473221 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
APTX-217ENST00000473221 LRP6O75581 1613 aa13.17□□□□□ -0.3
APTX-217ENST00000473221 PHLPP1O60346 1717 aa13.17□□□□□ -0.3
APTX-217ENST00000473221 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
APTX-217ENST00000473221 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
APTX-217ENST00000473221 CAMTA1Q9Y6Y1 1673 aa13.17□□□□□ -0.3
APTX-217ENST00000473221 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
APTX-217ENST00000473221 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
APTX-217ENST00000473221 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
APTX-217ENST00000473221 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
APTX-217ENST00000473221 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
APTX-217ENST00000473221 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
APTX-217ENST00000473221 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
APTX-217ENST00000473221 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
APTX-217ENST00000473221 FKBP8Q14318 412 aa13.15□□□□□ -0.3
APTX-217ENST00000473221 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.3
APTX-217ENST00000473221 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
APTX-217ENST00000473221 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
APTX-217ENST00000473221 ANKRD24Q8TF21 1146 aa13.14□□□□□ -0.31
APTX-217ENST00000473221 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
APTX-217ENST00000473221 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
APTX-217ENST00000473221 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
APTX-217ENST00000473221 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
APTX-217ENST00000473221 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
APTX-217ENST00000473221 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
APTX-217ENST00000473221 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
APTX-217ENST00000473221 ERBB3P21860 1342 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms