RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 NFAT5O94916 1531 aa14.03□□□□□ -0.16
NUDCD3-205ENST00000472246 OVOS2A0A0G2JMS6 1433 aa14.02□□□□□ -0.16
NUDCD3-205ENST00000472246 OVOS2A0A0J9YW53 1432 aa14.02□□□□□ -0.16
NUDCD3-205ENST00000472246 OVOS2Q6IE36 1432 aa14.02□□□□□ -0.16
NUDCD3-205ENST00000472246 PARD3Q8TEW0 1356 aa14.02□□□□□ -0.17
NUDCD3-205ENST00000472246 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.17
NUDCD3-205ENST00000472246 ARHGEF25Q86VW2 580 aa14.02□□□□□ -0.17
NUDCD3-205ENST00000472246 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.17
NUDCD3-205ENST00000472246 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
NUDCD3-205ENST00000472246 WDR17Q8IZU2 1322 aa14.01□□□□□ -0.17
NUDCD3-205ENST00000472246 KCNH5Q8NCM2 988 aa14.01□□□□□ -0.17
NUDCD3-205ENST00000472246 TONSLQ96HA7 1378 aa14□□□□□ -0.17
NUDCD3-205ENST00000472246 SBF2Q86WG5 1849 aa14□□□□□ -0.17
NUDCD3-205ENST00000472246 DDB1Q16531 1140 aa14□□□□□ -0.17
NUDCD3-205ENST00000472246 USP54Q70EL1 1684 aa13.99□□□□□ -0.17
NUDCD3-205ENST00000472246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■■■□□ 14.6
NUDCD3-205ENST00000472246 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
NUDCD3-205ENST00000472246 ABCC6O95255 1503 aa13.97□□□□□ -0.17
NUDCD3-205ENST00000472246 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
NUDCD3-205ENST00000472246 NME9Q86XW9 330 aa13.97□□□□□ -0.17
NUDCD3-205ENST00000472246 TMC1Q8TDI8 760 aa13.97□□□□□ -0.17
NUDCD3-205ENST00000472246 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 LTN1O94822 1766 aa13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
NUDCD3-205ENST00000472246 A0A1W2PP64 1363 aa13.96□□□□□ -0.18
NUDCD3-205ENST00000472246 C11orf95C9JLR9 678 aaPredicted RBP13.95□□□□□ -0.18
NUDCD3-205ENST00000472246 EDC4Q6P2E9 1401 aaKnown RBP13.94□□□□□ -0.18
NUDCD3-205ENST00000472246 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
NUDCD3-205ENST00000472246 CCDC7Q96M83 1385 aa13.94□□□□□ -0.18
NUDCD3-205ENST00000472246 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
NUDCD3-205ENST00000472246 NBPF14Q5TI25 921 aa13.93□□□□□ -0.18
NUDCD3-205ENST00000472246 HDGFL2Q7Z4V5 671 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-205ENST00000472246 ERBB3P21860 1342 aa13.92□□□□□ -0.18
NUDCD3-205ENST00000472246 BCL9O00512 1426 aa13.92□□□□□ -0.18
NUDCD3-205ENST00000472246 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
NUDCD3-205ENST00000472246 PLSCR1O15162 318 aa13.91□□□□□ -0.18
NUDCD3-205ENST00000472246 TESK2Q96S53 571 aa13.91□□□□□ -0.18
NUDCD3-205ENST00000472246 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-205ENST00000472246 ST20-MTHFSA0A0A6YYL1 179 aa13.9□□□□□ -0.18
NUDCD3-205ENST00000472246 EXOC5O00471 708 aa13.9□□□□□ -0.18
NUDCD3-205ENST00000472246 NLRP2Q9NX02 1062 aa13.9□□□□□ -0.18
NUDCD3-205ENST00000472246 TERF2IPQ9NYB0 399 aa13.9□□□□□ -0.18
NUDCD3-205ENST00000472246 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
NUDCD3-205ENST00000472246 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
NUDCD3-205ENST00000472246 CASZ1Q86V15 1759 aa13.88□□□□□ -0.19
NUDCD3-205ENST00000472246 PROM2Q8N271 834 aa13.88□□□□□ -0.19
NUDCD3-205ENST00000472246 PUS7Q96PZ0 661 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-205ENST00000472246 KCNQ2O43526 872 aa13.87□□□□□ -0.19
NUDCD3-205ENST00000472246 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
NUDCD3-205ENST00000472246 NINLQ9Y2I6 1382 aa13.86□□□□□ -0.19
NUDCD3-205ENST00000472246 IL2RBP14784 551 aa13.86□□□□□ -0.19
NUDCD3-205ENST00000472246 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-205ENST00000472246 SPON1Q9HCB6 807 aa13.86□□□□□ -0.19
NUDCD3-205ENST00000472246 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
NUDCD3-205ENST00000472246 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
NUDCD3-205ENST00000472246 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-205ENST00000472246 FBLN1P23142 703 aa13.84□□□□□ -0.19
NUDCD3-205ENST00000472246 IP6K1Q92551 441 aa13.84□□□□□ -0.19
NUDCD3-205ENST00000472246 LTV1Q96GA3 475 aaPredicted RBP13.84□□□□□ -0.19
NUDCD3-205ENST00000472246 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
NUDCD3-205ENST00000472246 BTAF1O14981 1849 aa13.84□□□□□ -0.19
NUDCD3-205ENST00000472246 ANKRD36BQ8N2N9 1353 aa13.83□□□□□ -0.19
NUDCD3-205ENST00000472246 USP47Q96K76 1375 aa13.83□□□□□ -0.19
NUDCD3-205ENST00000472246 COG3Q96JB2 828 aa13.83□□□□□ -0.2
NUDCD3-205ENST00000472246 MAP3K19Q56UN5 1328 aa13.83□□□□□ -0.2
NUDCD3-205ENST00000472246 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
NUDCD3-205ENST00000472246 ZBTB7AO95365 584 aa13.82□□□□□ -0.2
NUDCD3-205ENST00000472246 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
NUDCD3-205ENST00000472246 MYOM1P52179 1685 aa13.82□□□□□ -0.2
NUDCD3-205ENST00000472246 HOXC9P31274 260 aa13.81□□□□□ -0.2
NUDCD3-205ENST00000472246 STK32BQ9NY57 414 aa13.81□□□□□ -0.2
NUDCD3-205ENST00000472246 KAT6BQ8WYB5 2073 aa13.8□□□□□ -0.2
NUDCD3-205ENST00000472246 TMF1P82094 1093 aa13.8□□□□□ -0.2
NUDCD3-205ENST00000472246 SLC15A2Q16348 729 aa13.8□□□□□ -0.2
NUDCD3-205ENST00000472246 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
NUDCD3-205ENST00000472246 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 AMPHP49418 695 aa13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 MEGF6O75095 1541 aa13.79□□□□□ -0.2
NUDCD3-205ENST00000472246 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
NUDCD3-205ENST00000472246 PTGER2P43116 358 aa13.78□□□□□ -0.2
NUDCD3-205ENST00000472246 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
NUDCD3-205ENST00000472246 RTL1A6NKG5 1358 aa13.77□□□□□ -0.21
NUDCD3-205ENST00000472246 FYB1O15117 783 aa13.77□□□□□ -0.21
NUDCD3-205ENST00000472246 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
NUDCD3-205ENST00000472246 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
NUDCD3-205ENST00000472246 UTRNP46939 3433 aa13.75□□□□□ -0.21
NUDCD3-205ENST00000472246 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
NUDCD3-205ENST00000472246 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
NUDCD3-205ENST00000472246 SYTL4Q96C24 671 aaPredicted RBP13.74□□□□□ -0.21
NUDCD3-205ENST00000472246 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
NUDCD3-205ENST00000472246 MTFR1LQ9H019 292 aa13.74□□□□□ -0.21
NUDCD3-205ENST00000472246 NSD2O96028 1365 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms