RNA–Protein interactions for RNA: ENST00000472221.5

SEC61A2-212, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-212ENST00000472221 OVOS2A0A0G2JMS6 1433 aa23.86■■□□□ 1.41
SEC61A2-212ENST00000472221 OVOS2A0A0J9YW53 1432 aa23.86■■□□□ 1.41
SEC61A2-212ENST00000472221 OVOS2Q6IE36 1432 aa23.86■■□□□ 1.41
SEC61A2-212ENST00000472221 SBNO2Q9Y2G9 1366 aa23.86■■□□□ 1.41
SEC61A2-212ENST00000472221 KTN1Q86UP2 1357 aaKnown RBP23.85■■□□□ 1.41
SEC61A2-212ENST00000472221 DDB1Q16531 1140 aa23.84■■□□□ 1.41
SEC61A2-212ENST00000472221 NFAT5O94916 1531 aa23.84■■□□□ 1.41
SEC61A2-212ENST00000472221 WNK3Q9BYP7 1800 aa23.83■■□□□ 1.41
SEC61A2-212ENST00000472221 SOX12O15370 315 aa23.83■■□□□ 1.41
SEC61A2-212ENST00000472221 MON2Q7Z3U7 1717 aa23.82■■□□□ 1.4
SEC61A2-212ENST00000472221 RGPD5Q99666 1765 aa23.82■■□□□ 1.4
SEC61A2-212ENST00000472221 NBPF14Q5TI25 921 aa23.81■■□□□ 1.4
SEC61A2-212ENST00000472221 CARD11Q9BXL7 1154 aa23.81■■□□□ 1.4
SEC61A2-212ENST00000472221 SBF2Q86WG5 1849 aa23.8■■□□□ 1.4
SEC61A2-212ENST00000472221 CDCA7Q9BWT1 371 aaPredicted RBP23.8■■□□□ 1.4
SEC61A2-212ENST00000472221 CARD10Q9BWT7 1032 aa23.8■■□□□ 1.4
SEC61A2-212ENST00000472221 CD163L1Q9NR16 1453 aa23.79■■□□□ 1.4
SEC61A2-212ENST00000472221 MARCH10Q8NA82 808 aaPredicted RBP23.78■■□□□ 1.4
SEC61A2-212ENST00000472221 ABCC6O95255 1503 aa23.78■■□□□ 1.4
SEC61A2-212ENST00000472221 RGPD3A6NKT7 1758 aaPredicted RBP23.78■■□□□ 1.4
SEC61A2-212ENST00000472221 RGPD4Q7Z3J3 1758 aa23.78■■□□□ 1.4
SEC61A2-212ENST00000472221 USP31Q70CQ4 1352 aa23.78■■□□□ 1.4
SEC61A2-212ENST00000472221 BCL9O00512 1426 aa23.77■■□□□ 1.4
SEC61A2-212ENST00000472221 PLSCR1O15162 318 aa23.77■■□□□ 1.4
SEC61A2-212ENST00000472221 CSB-PGBD3P0DP91 1061 aa23.77■■□□□ 1.4
SEC61A2-212ENST00000472221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.77■■□□□ 1.4
SEC61A2-212ENST00000472221 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
SEC61A2-212ENST00000472221 PTF1AQ7RTS3 328 aa23.76■■□□□ 1.39
SEC61A2-212ENST00000472221 BCL11BQ9C0K0 894 aaPredicted RBP23.76■■□□□ 1.39
SEC61A2-212ENST00000472221 NME9Q86XW9 330 aa23.74■■□□□ 1.39
SEC61A2-212ENST00000472221 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
SEC61A2-212ENST00000472221 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
SEC61A2-212ENST00000472221 CCDC7Q96M83 1385 aa23.73■■□□□ 1.39
SEC61A2-212ENST00000472221 SLC12A5Q9H2X9 1139 aa23.72■■□□□ 1.39
SEC61A2-212ENST00000472221 HDGFL2Q7Z4V5 671 aaPredicted RBP23.71■■□□□ 1.39
SEC61A2-212ENST00000472221 EXOC5O00471 708 aa23.7■■□□□ 1.38
SEC61A2-212ENST00000472221 EDC4Q6P2E9 1401 aaKnown RBP23.69■■□□□ 1.38
SEC61A2-212ENST00000472221 ERBB3P21860 1342 aa23.69■■□□□ 1.38
SEC61A2-212ENST00000472221 PUS7Q96PZ0 661 aaKnown RBP23.69■■□□□ 1.38
SEC61A2-212ENST00000472221 TNS2Q63HR2 1409 aa23.68■■□□□ 1.38
SEC61A2-212ENST00000472221 PROM2Q8N271 834 aa23.68■■□□□ 1.38
SEC61A2-212ENST00000472221 ANO8Q9HCE9 1232 aaPredicted RBP23.68■■□□□ 1.38
SEC61A2-212ENST00000472221 LTN1O94822 1766 aa23.68■■□□□ 1.38
SEC61A2-212ENST00000472221 A0A1W2PP64 1363 aa23.67■■□□□ 1.38
SEC61A2-212ENST00000472221 SPON1Q9HCB6 807 aa23.67■■□□□ 1.38
SEC61A2-212ENST00000472221 KCNQ2O43526 872 aa23.66■■□□□ 1.38
SEC61A2-212ENST00000472221 TERF2IPQ9NYB0 399 aa23.66■■□□□ 1.38
SEC61A2-212ENST00000472221 TESK2Q96S53 571 aa23.64■■□□□ 1.37
SEC61A2-212ENST00000472221 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.37
SEC61A2-212ENST00000472221 ANKRD24Q8TF21 1146 aa23.63■■□□□ 1.37
SEC61A2-212ENST00000472221 CASZ1Q86V15 1759 aa23.62■■□□□ 1.37
SEC61A2-212ENST00000472221 IL2RBP14784 551 aa23.61■■□□□ 1.37
SEC61A2-212ENST00000472221 TXNRD1Q16881 649 aa23.61■■□□□ 1.37
SEC61A2-212ENST00000472221 ST20-MTHFSA0A0A6YYL1 179 aa23.6■■□□□ 1.37
SEC61A2-212ENST00000472221 PPP1R1BQ9UD71 204 aaPredicted RBP23.6■■□□□ 1.37
SEC61A2-212ENST00000472221 NINLQ9Y2I6 1382 aa23.6■■□□□ 1.37
SEC61A2-212ENST00000472221 NHSQ6T4R5 1651 aa23.6■■□□□ 1.37
SEC61A2-212ENST00000472221 PDGFDQ9GZP0 370 aaPredicted RBP23.59■■□□□ 1.37
SEC61A2-212ENST00000472221 IP6K1Q92551 441 aa23.57■■□□□ 1.36
SEC61A2-212ENST00000472221 ACSBG1Q96GR2 724 aa23.57■■□□□ 1.36
SEC61A2-212ENST00000472221 SLC15A2Q16348 729 aa23.55■■□□□ 1.36
SEC61A2-212ENST00000472221 STK32BQ9NY57 414 aa23.55■■□□□ 1.36
SEC61A2-212ENST00000472221 SLC24A1O60721 1099 aa23.54■■□□□ 1.36
SEC61A2-212ENST00000472221 FAM208AQ9UK61 1670 aaKnown RBP23.52■■□□□ 1.36
SEC61A2-212ENST00000472221 ZBTB7AO95365 584 aa23.52■■□□□ 1.36
SEC61A2-212ENST00000472221 COG3Q96JB2 828 aa23.52■■□□□ 1.36
SEC61A2-212ENST00000472221 MAP3K19Q56UN5 1328 aa23.51■■□□□ 1.35
SEC61A2-212ENST00000472221 ANKRD36BQ8N2N9 1353 aa23.51■■□□□ 1.35
SEC61A2-212ENST00000472221 BTAF1O14981 1849 aa23.5■■□□□ 1.35
SEC61A2-212ENST00000472221 PTGER2P43116 358 aa23.5■■□□□ 1.35
SEC61A2-212ENST00000472221 LTV1Q96GA3 475 aaPredicted RBP23.5■■□□□ 1.35
SEC61A2-212ENST00000472221 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
SEC61A2-212ENST00000472221 FBLN1P23142 703 aa23.49■■□□□ 1.35
SEC61A2-212ENST00000472221 HOXC9P31274 260 aa23.49■■□□□ 1.35
SEC61A2-212ENST00000472221 MYOM1P52179 1685 aa23.48■■□□□ 1.35
SEC61A2-212ENST00000472221 ATF5Q9Y2D1 282 aaPredicted RBP23.47■■□□□ 1.35
SEC61A2-212ENST00000472221 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
SEC61A2-212ENST00000472221 USP47Q96K76 1375 aa23.45■■□□□ 1.34
SEC61A2-212ENST00000472221 AMPHP49418 695 aa23.45■■□□□ 1.34
SEC61A2-212ENST00000472221 TMF1P82094 1093 aa23.45■■□□□ 1.34
SEC61A2-212ENST00000472221 DDX54Q8TDD1 881 aaKnown RBP23.45■■□□□ 1.34
SEC61A2-212ENST00000472221 YY1P25490 414 aa23.44■■□□□ 1.34
SEC61A2-212ENST00000472221 MTFR1LQ9H019 292 aa23.44■■□□□ 1.34
SEC61A2-212ENST00000472221 LRRC4BQ9NT99 713 aa23.44■■□□□ 1.34
SEC61A2-212ENST00000472221 KAT6BQ8WYB5 2073 aa23.44■■□□□ 1.34
SEC61A2-212ENST00000472221 DCAF8L1A6NGE4 600 aa23.43■■□□□ 1.34
SEC61A2-212ENST00000472221 FYB1O15117 783 aa23.43■■□□□ 1.34
SEC61A2-212ENST00000472221 SGIP1Q9BQI5 828 aa23.43■■□□□ 1.34
SEC61A2-212ENST00000472221 RGPD2P0DJD1 1756 aa23.42■■□□□ 1.34
SEC61A2-212ENST00000472221 RTL1A6NKG5 1358 aa23.42■■□□□ 1.34
SEC61A2-212ENST00000472221 RRS1Q15050 365 aaKnown RBP23.41■■□□□ 1.34
SEC61A2-212ENST00000472221 ZNF827Q17R98 1081 aa23.41■■□□□ 1.34
SEC61A2-212ENST00000472221 GGNBP2Q9H3C7 697 aa23.41■■□□□ 1.34
SEC61A2-212ENST00000472221 MEGF6O75095 1541 aa23.4■■□□□ 1.34
SEC61A2-212ENST00000472221 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.34
SEC61A2-212ENST00000472221 SLC27A3Q5K4L6 730 aa23.38■■□□□ 1.33
SEC61A2-212ENST00000472221 ZCRB1Q8TBF4 217 aaKnown RBP23.38■■□□□ 1.33
SEC61A2-212ENST00000472221 FHDC1Q9C0D6 1143 aaPredicted RBP23.38■■□□□ 1.33
SEC61A2-212ENST00000472221 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
SEC61A2-212ENST00000472221 PRIM1P49642 420 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms