RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
CD46-213ENST00000471987 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
CD46-213ENST00000471987 LCE2AQ5TA79 106 aaPredicted RBP11.24□□□□□ -0.61
CD46-213ENST00000471987 PURBQ96QR8 312 aaKnown RBP11.24□□□□□ -0.61
CD46-213ENST00000471987 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
CD46-213ENST00000471987 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
CD46-213ENST00000471987 ADAM32Q8TC27 787 aa11.22□□□□□ -0.61
CD46-213ENST00000471987 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
CD46-213ENST00000471987 OCSTAMPQ9BR26 566 aa11.22□□□□□ -0.61
CD46-213ENST00000471987 UPP2O95045 317 aa11.21□□□□□ -0.61
CD46-213ENST00000471987 MEIOBQ8N635 442 aa11.2□□□□□ -0.62
CD46-213ENST00000471987 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
CD46-213ENST00000471987 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
CD46-213ENST00000471987 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
CD46-213ENST00000471987 PPP1R26Q5T8A7 1209 aaPredicted RBP11.19□□□□□ -0.62
CD46-213ENST00000471987 NXF1Q9UBU9 619 aaKnown RBP11.19□□□□□ -0.62
CD46-213ENST00000471987 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
CD46-213ENST00000471987 C6orf118Q5T5N4 469 aa11.18□□□□□ -0.62
CD46-213ENST00000471987 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
CD46-213ENST00000471987 BMP2P12643 396 aa11.17□□□□□ -0.62
CD46-213ENST00000471987 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
CD46-213ENST00000471987 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
CD46-213ENST00000471987 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
CD46-213ENST00000471987 SLC16A10Q8TF71 515 aa11.16□□□□□ -0.62
CD46-213ENST00000471987 TSEN34Q9BSV6 310 aaKnown RBP11.16□□□□□ -0.62
CD46-213ENST00000471987 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
CD46-213ENST00000471987 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
CD46-213ENST00000471987 MAN1A2O60476 641 aa11.13□□□□□ -0.63
CD46-213ENST00000471987 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
CD46-213ENST00000471987 SOCS7O14512 581 aa11.12□□□□□ -0.63
CD46-213ENST00000471987 Q6ZVU0 165 aa11.12□□□□□ -0.63
CD46-213ENST00000471987 WIPF1O43516 503 aa11.11□□□□□ -0.63
CD46-213ENST00000471987 SOBPA7XYQ1 873 aa11.1□□□□□ -0.63
CD46-213ENST00000471987 APBB1O00213 710 aa11.1□□□□□ -0.63
CD46-213ENST00000471987 CBLBQ13191 982 aa11.1□□□□□ -0.63
CD46-213ENST00000471987 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
CD46-213ENST00000471987 ESPNB1AK53 854 aa11.08□□□□□ -0.64
CD46-213ENST00000471987 H3BM21 787 aa11.08□□□□□ -0.64
CD46-213ENST00000471987 RAB15P59190 212 aa11.08□□□□□ -0.64
CD46-213ENST00000471987 LCE2CQ5TA81 110 aa11.08□□□□□ -0.64
CD46-213ENST00000471987 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
CD46-213ENST00000471987 IRF7Q92985 503 aa11.08□□□□□ -0.64
CD46-213ENST00000471987 LOC100996750A0A140TA64 210 aa11.07□□□□□ -0.64
CD46-213ENST00000471987 FBXO45P0C2W1 286 aa11.07□□□□□ -0.64
CD46-213ENST00000471987 MTMR14Q8NCE2 650 aa11.07□□□□□ -0.64
CD46-213ENST00000471987 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
CD46-213ENST00000471987 KRTAP4-6Q9BYQ5 205 aa11.07□□□□□ -0.64
CD46-213ENST00000471987 VEGFBP49765 207 aa11.06□□□□□ -0.64
CD46-213ENST00000471987 PCDHB9Q9Y5E1 797 aa11.06□□□□□ -0.64
CD46-213ENST00000471987 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
CD46-213ENST00000471987 TTLL8A6PVC2 850 aa11.05□□□□□ -0.64
CD46-213ENST00000471987 ERVH48-1M5A8F1 160 aa11.05□□□□□ -0.64
CD46-213ENST00000471987 SPINT1O43278 529 aa11.05□□□□□ -0.64
CD46-213ENST00000471987 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
CD46-213ENST00000471987 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
CD46-213ENST00000471987 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
CD46-213ENST00000471987 DNMT3LQ9UJW3 386 aa11.05□□□□□ -0.64
CD46-213ENST00000471987 NR1H3Q13133 447 aa11.04□□□□□ -0.64
CD46-213ENST00000471987 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
CD46-213ENST00000471987 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
CD46-213ENST00000471987 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
CD46-213ENST00000471987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.03□□□□□ -0.641e-7■□□□□ 8.6
CD46-213ENST00000471987 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
CD46-213ENST00000471987 RELBQ01201 579 aa11.02□□□□□ -0.65
CD46-213ENST00000471987 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
CD46-213ENST00000471987 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
CD46-213ENST00000471987 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
CD46-213ENST00000471987 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
CD46-213ENST00000471987 LILRA1O75019 489 aa11□□□□□ -0.65
CD46-213ENST00000471987 ADH1AP07327 375 aa11□□□□□ -0.65
CD46-213ENST00000471987 FIGNL2A6NMB9 653 aa10.99□□□□□ -0.65
CD46-213ENST00000471987 GPR37L1O60883 481 aa10.99□□□□□ -0.65
CD46-213ENST00000471987 GMPRP36959 345 aa10.99□□□□□ -0.65
CD46-213ENST00000471987 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
CD46-213ENST00000471987 PRM3Q9NNZ6 103 aa10.99□□□□□ -0.65
CD46-213ENST00000471987 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
CD46-213ENST00000471987 PPFIA3O75145 1194 aa10.98□□□□□ -0.65
CD46-213ENST00000471987 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
CD46-213ENST00000471987 INSM2Q96T92 566 aaPredicted RBP10.98□□□□□ -0.65
CD46-213ENST00000471987 CYLDQ9NQC7 956 aa10.98□□□□□ -0.65
CD46-213ENST00000471987 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
CD46-213ENST00000471987 CTSOP43234 321 aaPredicted RBP10.97□□□□□ -0.65
CD46-213ENST00000471987 ZNF395Q9H8N7 513 aaPredicted RBP10.97□□□□□ -0.65
CD46-213ENST00000471987 POLMQ9NP87 494 aaPredicted RBP10.97□□□□□ -0.65
CD46-213ENST00000471987 PTGIRP43119 386 aa10.96□□□□□ -0.65
CD46-213ENST00000471987 PTSQ03393 145 aa10.95□□□□□ -0.66
CD46-213ENST00000471987 STK17AQ9UEE5 414 aa10.95□□□□□ -0.66
CD46-213ENST00000471987 KDF1Q8NAX2 398 aaPredicted RBP10.93□□□□□ -0.66
CD46-213ENST00000471987 TBC1D2BQ9UPU7 963 aa10.93□□□□□ -0.66
CD46-213ENST00000471987 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
CD46-213ENST00000471987 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
CD46-213ENST00000471987 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
CD46-213ENST00000471987 CC2D2BQ6DHV5 1058 aa10.91□□□□□ -0.66
CD46-213ENST00000471987 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
CD46-213ENST00000471987 PCDHB11Q9Y5F2 797 aa10.9□□□□□ -0.66
CD46-213ENST00000471987 SLC35F4A4IF30 521 aa10.88□□□□□ -0.67
CD46-213ENST00000471987 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
CD46-213ENST00000471987 ZSCAN1Q8NBB4 408 aa10.88□□□□□ -0.67
CD46-213ENST00000471987 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
CD46-213ENST00000471987 CEP126Q9P2H0 1117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms