RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
FDPS-209ENST00000471117 PSME1Q06323 249 aa11.42□□□□□ -0.58
FDPS-209ENST00000471117 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
FDPS-209ENST00000471117 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
FDPS-209ENST00000471117 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
FDPS-209ENST00000471117 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
FDPS-209ENST00000471117 TULP4Q9NRJ4 1543 aa11.41□□□□□ -0.58
FDPS-209ENST00000471117 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
FDPS-209ENST00000471117 STK32BQ9NY57 414 aa11.41□□□□□ -0.58
FDPS-209ENST00000471117 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
FDPS-209ENST00000471117 SBF2Q86WG5 1849 aa11.4□□□□□ -0.58
FDPS-209ENST00000471117 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.58
FDPS-209ENST00000471117 PROM2Q8N271 834 aa11.4□□□□□ -0.58
FDPS-209ENST00000471117 PUS7Q96PZ0 661 aaKnown RBP11.4□□□□□ -0.58
FDPS-209ENST00000471117 RGPD3A6NKT7 1758 aaPredicted RBP11.4□□□□□ -0.58
FDPS-209ENST00000471117 RGPD4Q7Z3J3 1758 aa11.4□□□□□ -0.58
FDPS-209ENST00000471117 ARHGEF10O15013 1369 aa11.4□□□□□ -0.59
FDPS-209ENST00000471117 PLSCR1O15162 318 aa11.39□□□□□ -0.59
FDPS-209ENST00000471117 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
FDPS-209ENST00000471117 FMN2Q9NZ56 1722 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
FDPS-209ENST00000471117 HTRA3P83110 453 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 NLGN2Q8NFZ4 835 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 PANK3Q9H999 370 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 SBNO1A3KN83 1393 aa11.38□□□□□ -0.59
FDPS-209ENST00000471117 CHRNA2Q15822 529 aa11.37□□□□□ -0.59
FDPS-209ENST00000471117 CDK19Q9BWU1 502 aa11.37□□□□□ -0.59
FDPS-209ENST00000471117 PRDM11Q9NQV5 511 aa11.37□□□□□ -0.59
FDPS-209ENST00000471117 WDR90Q96KV7 1748 aa11.36□□□□□ -0.59
FDPS-209ENST00000471117 WASLO00401 505 aaPredicted RBP11.36□□□□□ -0.59
FDPS-209ENST00000471117 KIF3CO14782 793 aa11.36□□□□□ -0.59
FDPS-209ENST00000471117 GRIN3BO60391 1043 aa11.36□□□□□ -0.59
FDPS-209ENST00000471117 CNGB1Q14028 1251 aaPredicted RBP11.36□□□□□ -0.59
FDPS-209ENST00000471117 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
FDPS-209ENST00000471117 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
FDPS-209ENST00000471117 KLRG1Q96E93 195 aa11.35□□□□□ -0.59
FDPS-209ENST00000471117 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
FDPS-209ENST00000471117 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
FDPS-209ENST00000471117 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
FDPS-209ENST00000471117 ITSN1Q15811 1721 aa11.34□□□□□ -0.59
FDPS-209ENST00000471117 RALBP1Q15311 655 aa11.33□□□□□ -0.6
FDPS-209ENST00000471117 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
FDPS-209ENST00000471117 CCDC184Q52MB2 194 aa11.33□□□□□ -0.6
FDPS-209ENST00000471117 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
FDPS-209ENST00000471117 EVA1CP58658 441 aa11.32□□□□□ -0.6
FDPS-209ENST00000471117 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
FDPS-209ENST00000471117 GOLGB1Q14789 3259 aaKnown RBP11.32□□□□□ -0.6
FDPS-209ENST00000471117 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
FDPS-209ENST00000471117 ADCY9O60503 1353 aa11.31□□□□□ -0.6
FDPS-209ENST00000471117 TOPAZ1Q8N9V7 1692 aa11.31□□□□□ -0.6
FDPS-209ENST00000471117 PMFBP1Q8TBY8 1022 aa11.31□□□□□ -0.6
FDPS-209ENST00000471117 NUDT16Q96DE0 195 aaKnown RBP11.31□□□□□ -0.6
FDPS-209ENST00000471117 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
FDPS-209ENST00000471117 LARP1Q6PKG0 1096 aaKnown RBP11.3□□□□□ -0.6
FDPS-209ENST00000471117 TCP11L2Q8N4U5 519 aa11.3□□□□□ -0.6
FDPS-209ENST00000471117 TERF2IPQ9NYB0 399 aa11.3□□□□□ -0.6
FDPS-209ENST00000471117 KNSTRNQ9Y448 316 aa11.3□□□□□ -0.6
FDPS-209ENST00000471117 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
FDPS-209ENST00000471117 ATP7BP35670 1465 aa11.3□□□□□ -0.6
FDPS-209ENST00000471117 ALS2Q96Q42 1657 aa11.3□□□□□ -0.6
FDPS-209ENST00000471117 ANKRD36BQ8N2N9 1353 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 KIAA0232Q92628 1395 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
FDPS-209ENST00000471117 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 OVOS2A0A0G2JMS6 1433 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
FDPS-209ENST00000471117 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
FDPS-209ENST00000471117 HDGFL2Q7Z4V5 671 aaPredicted RBP11.29□□□□□ -0.6
FDPS-209ENST00000471117 MYBBP1AQ9BQG0 1328 aaKnown RBP11.29□□□□□ -0.6
FDPS-209ENST00000471117 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
FDPS-209ENST00000471117 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
FDPS-209ENST00000471117 TNS2Q63HR2 1409 aa11.28□□□□□ -0.6
FDPS-209ENST00000471117 POLD1P28340 1107 aa11.28□□□□□ -0.6
FDPS-209ENST00000471117 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
FDPS-209ENST00000471117 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
FDPS-209ENST00000471117 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
FDPS-209ENST00000471117 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
FDPS-209ENST00000471117 SSH2Q76I76 1423 aa11.27□□□□□ -0.6
FDPS-209ENST00000471117 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
FDPS-209ENST00000471117 NSD3Q9BZ95 1437 aa11.26□□□□□ -0.61
FDPS-209ENST00000471117 MON2Q7Z3U7 1717 aa11.26□□□□□ -0.61
FDPS-209ENST00000471117 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
FDPS-209ENST00000471117 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
FDPS-209ENST00000471117 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
FDPS-209ENST00000471117 FAM9BQ8IZU0 186 aa11.26□□□□□ -0.61
FDPS-209ENST00000471117 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
FDPS-209ENST00000471117 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
FDPS-209ENST00000471117 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
FDPS-209ENST00000471117 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
FDPS-209ENST00000471117 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
FDPS-209ENST00000471117 TOMM70O94826 608 aa11.25□□□□□ -0.61
FDPS-209ENST00000471117 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
FDPS-209ENST00000471117 KIF20BQ96Q89 1820 aa11.25□□□□□ -0.61
FDPS-209ENST00000471117 NPC1L1Q9UHC9 1359 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms