RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 BRD4O60885 1362 aaPredicted RBP13.35□□□□□ -0.27
CLK2-204ENST00000471047 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
CLK2-204ENST00000471047 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
CLK2-204ENST00000471047 ACEP12821 1306 aa13.35□□□□□ -0.27
CLK2-204ENST00000471047 TNS1Q9HBL0 1735 aaKnown RBP13.34□□□□□ -0.27
CLK2-204ENST00000471047 SSH2Q76I76 1423 aa13.34□□□□□ -0.27
CLK2-204ENST00000471047 USP6P35125 1406 aa13.33□□□□□ -0.28
CLK2-204ENST00000471047 FYB1O15117 783 aa13.33□□□□□ -0.28
CLK2-204ENST00000471047 APBA3O96018 575 aa13.33□□□□□ -0.28
CLK2-204ENST00000471047 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
CLK2-204ENST00000471047 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
CLK2-204ENST00000471047 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
CLK2-204ENST00000471047 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
CLK2-204ENST00000471047 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
CLK2-204ENST00000471047 MORC1Q86VD1 984 aa13.3□□□□□ -0.28
CLK2-204ENST00000471047 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
CLK2-204ENST00000471047 GGNBP2Q9H3C7 697 aa13.29□□□□□ -0.28
CLK2-204ENST00000471047 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
CLK2-204ENST00000471047 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
CLK2-204ENST00000471047 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
CLK2-204ENST00000471047 COL14A1Q05707 1796 aaKnown RBP13.29□□□□□ -0.28
CLK2-204ENST00000471047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLK2-204ENST00000471047 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
CLK2-204ENST00000471047 PNISRQ8TF01 805 aaKnown RBP13.28□□□□□ -0.28
CLK2-204ENST00000471047 SPON1Q9HCB6 807 aa13.28□□□□□ -0.28
CLK2-204ENST00000471047 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
CLK2-204ENST00000471047 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
CLK2-204ENST00000471047 KCNQ2O43526 872 aa13.27□□□□□ -0.29
CLK2-204ENST00000471047 CHRNA2Q15822 529 aa13.27□□□□□ -0.29
CLK2-204ENST00000471047 NBPF14Q5TI25 921 aa13.27□□□□□ -0.29
CLK2-204ENST00000471047 STRN4Q9NRL3 753 aa13.27□□□□□ -0.29
CLK2-204ENST00000471047 OVOS2A0A0J9YW53 1432 aa13.26□□□□□ -0.29
CLK2-204ENST00000471047 PIK3C2AO00443 1686 aa13.26□□□□□ -0.29
CLK2-204ENST00000471047 UTRNP46939 3433 aa13.26□□□□□ -0.29
CLK2-204ENST00000471047 OVOS2Q6IE36 1432 aa13.26□□□□□ -0.29
CLK2-204ENST00000471047 NME9Q86XW9 330 aa13.26□□□□□ -0.29
CLK2-204ENST00000471047 TRPM3Q9HCF6 1732 aaPredicted RBP13.26□□□□□ -0.29
CLK2-204ENST00000471047 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
CLK2-204ENST00000471047 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
CLK2-204ENST00000471047 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
CLK2-204ENST00000471047 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
CLK2-204ENST00000471047 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
CLK2-204ENST00000471047 RREB1Q92766 1687 aa13.24□□□□□ -0.29
CLK2-204ENST00000471047 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
CLK2-204ENST00000471047 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
CLK2-204ENST00000471047 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
CLK2-204ENST00000471047 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
CLK2-204ENST00000471047 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
CLK2-204ENST00000471047 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
CLK2-204ENST00000471047 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
CLK2-204ENST00000471047 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
CLK2-204ENST00000471047 INSRP06213 1382 aa13.22□□□□□ -0.29
CLK2-204ENST00000471047 TNNT2P45379 298 aaPredicted RBP13.22□□□□□ -0.29
CLK2-204ENST00000471047 FAM9BQ8IZU0 186 aa13.22□□□□□ -0.29
CLK2-204ENST00000471047 COG3Q96JB2 828 aa13.22□□□□□ -0.29
CLK2-204ENST00000471047 YTHDC1Q96MU7 727 aaKnown RBP13.22□□□□□ -0.29
CLK2-204ENST00000471047 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.29
CLK2-204ENST00000471047 MTHFSP49914 203 aa13.21□□□□□ -0.29
CLK2-204ENST00000471047 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
CLK2-204ENST00000471047 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
CLK2-204ENST00000471047 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
CLK2-204ENST00000471047 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.3
CLK2-204ENST00000471047 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
CLK2-204ENST00000471047 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
CLK2-204ENST00000471047 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
CLK2-204ENST00000471047 LARP1Q6PKG0 1096 aaKnown RBP13.19□□□□□ -0.3
CLK2-204ENST00000471047 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
CLK2-204ENST00000471047 ZBTB7AO95365 584 aa13.18□□□□□ -0.3
CLK2-204ENST00000471047 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
CLK2-204ENST00000471047 EVA1CP58658 441 aa13.17□□□□□ -0.3
CLK2-204ENST00000471047 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
CLK2-204ENST00000471047 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
CLK2-204ENST00000471047 FBLN1P23142 703 aa13.16□□□□□ -0.3
CLK2-204ENST00000471047 PTGER2P43116 358 aa13.16□□□□□ -0.3
CLK2-204ENST00000471047 NLRP6P59044 892 aa13.16□□□□□ -0.3
CLK2-204ENST00000471047 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
CLK2-204ENST00000471047 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
CLK2-204ENST00000471047 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
CLK2-204ENST00000471047 SLIT3O75094 1523 aa13.15□□□□□ -0.3
CLK2-204ENST00000471047 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
CLK2-204ENST00000471047 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
CLK2-204ENST00000471047 NFAT5O94916 1531 aa13.14□□□□□ -0.31
CLK2-204ENST00000471047 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
CLK2-204ENST00000471047 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLK2-204ENST00000471047 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
CLK2-204ENST00000471047 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
CLK2-204ENST00000471047 USP19O94966 1318 aa13.13□□□□□ -0.31
CLK2-204ENST00000471047 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLK2-204ENST00000471047 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
CLK2-204ENST00000471047 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
CLK2-204ENST00000471047 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
CLK2-204ENST00000471047 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
CLK2-204ENST00000471047 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
CLK2-204ENST00000471047 PROM2Q8N271 834 aa13.12□□□□□ -0.31
CLK2-204ENST00000471047 SYT17Q9BSW7 474 aa13.12□□□□□ -0.31
CLK2-204ENST00000471047 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
CLK2-204ENST00000471047 PLSCR1O15162 318 aa13.11□□□□□ -0.31
CLK2-204ENST00000471047 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
CLK2-204ENST00000471047 MAP3K19Q56UN5 1328 aa13.11□□□□□ -0.31
CLK2-204ENST00000471047 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms