RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 LRP5O75197 1615 aa16.34■□□□□ 0.21
HLA-C-206ENST00000470363 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.21
HLA-C-206ENST00000470363 AKAP12Q02952 1782 aa16.33■□□□□ 0.21
HLA-C-206ENST00000470363 R3HDM1Q15032 1099 aaKnown RBP16.33■□□□□ 0.2
HLA-C-206ENST00000470363 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
HLA-C-206ENST00000470363 NFAT5O94916 1531 aa16.33■□□□□ 0.2
HLA-C-206ENST00000470363 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
HLA-C-206ENST00000470363 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
HLA-C-206ENST00000470363 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
HLA-C-206ENST00000470363 SLC12A5Q9H2X9 1139 aa16.32■□□□□ 0.2
HLA-C-206ENST00000470363 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
HLA-C-206ENST00000470363 TESK2Q96S53 571 aa16.31■□□□□ 0.2
HLA-C-206ENST00000470363 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
HLA-C-206ENST00000470363 BCL9O00512 1426 aa16.3■□□□□ 0.2
HLA-C-206ENST00000470363 DDB1Q16531 1140 aa16.3■□□□□ 0.2
HLA-C-206ENST00000470363 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
HLA-C-206ENST00000470363 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
HLA-C-206ENST00000470363 NME9Q86XW9 330 aa16.29■□□□□ 0.2
HLA-C-206ENST00000470363 CDCA7Q9BWT1 371 aaPredicted RBP16.29■□□□□ 0.2
HLA-C-206ENST00000470363 TIMELESSQ9UNS1 1208 aa16.29■□□□□ 0.2
HLA-C-206ENST00000470363 PLSCR1O15162 318 aa16.28■□□□□ 0.2
HLA-C-206ENST00000470363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
HLA-C-206ENST00000470363 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
HLA-C-206ENST00000470363 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
HLA-C-206ENST00000470363 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
HLA-C-206ENST00000470363 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
HLA-C-206ENST00000470363 SOX12O15370 315 aa16.27■□□□□ 0.2
HLA-C-206ENST00000470363 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
HLA-C-206ENST00000470363 ABCC6O95255 1503 aa16.26■□□□□ 0.19
HLA-C-206ENST00000470363 PROM2Q8N271 834 aa16.26■□□□□ 0.19
HLA-C-206ENST00000470363 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
HLA-C-206ENST00000470363 USP54Q70EL1 1684 aa16.26■□□□□ 0.19
HLA-C-206ENST00000470363 RREB1Q92766 1687 aa16.26■□□□□ 0.19
HLA-C-206ENST00000470363 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
HLA-C-206ENST00000470363 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
HLA-C-206ENST00000470363 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
HLA-C-206ENST00000470363 EDC4Q6P2E9 1401 aaKnown RBP16.25■□□□□ 0.19
HLA-C-206ENST00000470363 ERBB3P21860 1342 aa16.24■□□□□ 0.19
HLA-C-206ENST00000470363 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
HLA-C-206ENST00000470363 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
HLA-C-206ENST00000470363 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
HLA-C-206ENST00000470363 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
HLA-C-206ENST00000470363 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
HLA-C-206ENST00000470363 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
HLA-C-206ENST00000470363 EXOC5O00471 708 aa16.22■□□□□ 0.19
HLA-C-206ENST00000470363 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
HLA-C-206ENST00000470363 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
HLA-C-206ENST00000470363 WNK3Q9BYP7 1800 aa16.2■□□□□ 0.18
HLA-C-206ENST00000470363 NINLQ9Y2I6 1382 aa16.2■□□□□ 0.18
HLA-C-206ENST00000470363 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
HLA-C-206ENST00000470363 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
HLA-C-206ENST00000470363 KCNQ2O43526 872 aa16.18■□□□□ 0.18
HLA-C-206ENST00000470363 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
HLA-C-206ENST00000470363 IP6K1Q92551 441 aa16.18■□□□□ 0.18
HLA-C-206ENST00000470363 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
HLA-C-206ENST00000470363 RGPD3A6NKT7 1758 aaPredicted RBP16.18■□□□□ 0.18
HLA-C-206ENST00000470363 RGPD4Q7Z3J3 1758 aa16.18■□□□□ 0.18
HLA-C-206ENST00000470363 NLRP2Q9NX02 1062 aa16.17■□□□□ 0.18
HLA-C-206ENST00000470363 IL2RBP14784 551 aa16.16■□□□□ 0.18
HLA-C-206ENST00000470363 FBLN1P23142 703 aa16.15■□□□□ 0.18
HLA-C-206ENST00000470363 TXNRD1Q16881 649 aa16.15■□□□□ 0.18
HLA-C-206ENST00000470363 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
HLA-C-206ENST00000470363 PDGFDQ9GZP0 370 aaPredicted RBP16.14■□□□□ 0.17
HLA-C-206ENST00000470363 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
HLA-C-206ENST00000470363 FYB1O15117 783 aa16.13■□□□□ 0.17
HLA-C-206ENST00000470363 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
HLA-C-206ENST00000470363 LTN1O94822 1766 aa16.13■□□□□ 0.17
HLA-C-206ENST00000470363 USP47Q96K76 1375 aa16.13■□□□□ 0.17
HLA-C-206ENST00000470363 HOXC9P31274 260 aa16.12■□□□□ 0.17
HLA-C-206ENST00000470363 COG3Q96JB2 828 aa16.12■□□□□ 0.17
HLA-C-206ENST00000470363 TMF1P82094 1093 aa16.11■□□□□ 0.17
HLA-C-206ENST00000470363 ACSBG1Q96GR2 724 aa16.1■□□□□ 0.17
HLA-C-206ENST00000470363 SLC15A2Q16348 729 aa16.09■□□□□ 0.17
HLA-C-206ENST00000470363 CASZ1Q86V15 1759 aa16.08■□□□□ 0.17
HLA-C-206ENST00000470363 PTGER2P43116 358 aa16.08■□□□□ 0.16
HLA-C-206ENST00000470363 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
HLA-C-206ENST00000470363 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
HLA-C-206ENST00000470363 NHSQ6T4R5 1651 aa16.08■□□□□ 0.16
HLA-C-206ENST00000470363 GGNBP2Q9H3C7 697 aa16.07■□□□□ 0.16
HLA-C-206ENST00000470363 LRRC4BQ9NT99 713 aa16.07■□□□□ 0.16
HLA-C-206ENST00000470363 AMPHP49418 695 aa16.06■□□□□ 0.16
HLA-C-206ENST00000470363 RRS1Q15050 365 aaKnown RBP16.06■□□□□ 0.16
HLA-C-206ENST00000470363 NBPF6Q5VWK0 638 aa16.06■□□□□ 0.16
HLA-C-206ENST00000470363 NBPF4Q96M43 638 aa16.06■□□□□ 0.16
HLA-C-206ENST00000470363 SGIP1Q9BQI5 828 aa16.06■□□□□ 0.16
HLA-C-206ENST00000470363 UTRNP46939 3433 aa16.05■□□□□ 0.16
HLA-C-206ENST00000470363 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
HLA-C-206ENST00000470363 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
HLA-C-206ENST00000470363 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
HLA-C-206ENST00000470363 FAM208AQ9UK61 1670 aaKnown RBP16.05■□□□□ 0.16
HLA-C-206ENST00000470363 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
HLA-C-206ENST00000470363 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
HLA-C-206ENST00000470363 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
HLA-C-206ENST00000470363 PAPPAQ13219 1627 aa16.03■□□□□ 0.16
HLA-C-206ENST00000470363 ZNF827Q17R98 1081 aa16.02■□□□□ 0.16
HLA-C-206ENST00000470363 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.16
HLA-C-206ENST00000470363 PPP1R1BQ9UD71 204 aaPredicted RBP16.02■□□□□ 0.16
HLA-C-206ENST00000470363 MEGF6O75095 1541 aa16.02■□□□□ 0.15
HLA-C-206ENST00000470363 NSD2O96028 1365 aa16.01■□□□□ 0.15
HLA-C-206ENST00000470363 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms