RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
PGAP1-208ENST00000470179 TRMT2AQ8IZ69 625 aaKnown RBP21.37■■□□□ 1.01
PGAP1-208ENST00000470179 PHF8Q9UPP1 1060 aa21.37■■□□□ 1.01
PGAP1-208ENST00000470179 USP6P35125 1406 aa21.36■■□□□ 1.01
PGAP1-208ENST00000470179 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
PGAP1-208ENST00000470179 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
PGAP1-208ENST00000470179 PDZRN3Q9UPQ7 1066 aa21.35■■□□□ 1.01
PGAP1-208ENST00000470179 NSD2O96028 1365 aa21.35■■□□□ 1.01
PGAP1-208ENST00000470179 MFAP1P55081 439 aaKnown RBP21.33■■□□□ 1.01
PGAP1-208ENST00000470179 SLAIN2Q9P270 581 aa21.33■■□□□ 1
PGAP1-208ENST00000470179 E9PSI1 815 aa21.32■■□□□ 1
PGAP1-208ENST00000470179 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
PGAP1-208ENST00000470179 CGNL1Q0VF96 1302 aa21.32■■□□□ 1
PGAP1-208ENST00000470179 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
PGAP1-208ENST00000470179 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
PGAP1-208ENST00000470179 ORAI2Q96SN7 254 aa21.32■■□□□ 1
PGAP1-208ENST00000470179 KIF20BQ96Q89 1820 aa21.32■■□□□ 1
PGAP1-208ENST00000470179 FOXD4L1Q9NU39 408 aa21.31■■□□□ 1
PGAP1-208ENST00000470179 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
PGAP1-208ENST00000470179 USP54Q70EL1 1684 aa21.3■■□□□ 1
PGAP1-208ENST00000470179 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
PGAP1-208ENST00000470179 NGDNQ8NEJ9 315 aaKnown RBP21.3■■□□□ 1
PGAP1-208ENST00000470179 TTC21AQ8NDW8 1320 aa21.29■■□□□ 1
PGAP1-208ENST00000470179 ANTXR1Q9H6X2 564 aa21.29■■□□□ 1
PGAP1-208ENST00000470179 TRPM3Q9HCF6 1732 aaPredicted RBP21.29■■□□□ 1
PGAP1-208ENST00000470179 XRCC6P12956 609 aaKnown RBP eCLIP21.28■■□□□ 1
PGAP1-208ENST00000470179 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
PGAP1-208ENST00000470179 TTC21BQ7Z4L5 1316 aa21.28■■□□□ 1
PGAP1-208ENST00000470179 BRINP3Q76B58 766 aa21.27■■□□□ 1
PGAP1-208ENST00000470179 FYB1O15117 783 aa21.26■□□□□ 0.99
PGAP1-208ENST00000470179 NHSL1Q5SYE7 1610 aa21.26■□□□□ 0.99
PGAP1-208ENST00000470179 USP31Q70CQ4 1352 aa21.25■□□□□ 0.99
PGAP1-208ENST00000470179 FAM43AQ8N2R8 423 aa21.25■□□□□ 0.99
PGAP1-208ENST00000470179 PXDNQ92626 1479 aa21.25■□□□□ 0.99
PGAP1-208ENST00000470179 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
PGAP1-208ENST00000470179 BECN1Q14457 450 aa21.24■□□□□ 0.99
PGAP1-208ENST00000470179 MORC1Q86VD1 984 aa21.23■□□□□ 0.99
PGAP1-208ENST00000470179 SBNO1A3KN83 1393 aa21.23■□□□□ 0.99
PGAP1-208ENST00000470179 PIK3C2AO00443 1686 aa21.23■□□□□ 0.99
PGAP1-208ENST00000470179 CERKQ8TCT0 537 aa21.23■□□□□ 0.99
PGAP1-208ENST00000470179 INSRP06213 1382 aa21.22■□□□□ 0.99
PGAP1-208ENST00000470179 MTHFSP49914 203 aa21.22■□□□□ 0.99
PGAP1-208ENST00000470179 ALS2Q96Q42 1657 aa21.22■□□□□ 0.99
PGAP1-208ENST00000470179 PSME1Q06323 249 aa21.22■□□□□ 0.99
PGAP1-208ENST00000470179 TBC1D32Q96NH3 1257 aa21.22■□□□□ 0.99
PGAP1-208ENST00000470179 OVOS2A0A0J9YW53 1432 aa21.21■□□□□ 0.99
PGAP1-208ENST00000470179 OVOS2Q6IE36 1432 aa21.21■□□□□ 0.99
PGAP1-208ENST00000470179 AHDC1Q5TGY3 1603 aaPredicted RBP21.21■□□□□ 0.99
PGAP1-208ENST00000470179 FOXO3O43524 673 aa21.21■□□□□ 0.99
PGAP1-208ENST00000470179 ROBO1Q9Y6N7 1651 aa21.21■□□□□ 0.99
PGAP1-208ENST00000470179 NAP1L5Q96NT1 182 aaPredicted RBP21.21■□□□□ 0.99
PGAP1-208ENST00000470179 TOM1O60784 492 aa21.2■□□□□ 0.98
PGAP1-208ENST00000470179 MARF1Q9Y4F3 1742 aaKnown RBP21.2■□□□□ 0.98
PGAP1-208ENST00000470179 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
PGAP1-208ENST00000470179 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
PGAP1-208ENST00000470179 UBE2Q2Q8WVN8 375 aa21.19■□□□□ 0.98
PGAP1-208ENST00000470179 SOS2Q07890 1332 aaPredicted RBP21.19■□□□□ 0.98
PGAP1-208ENST00000470179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.19■□□□□ 0.98
PGAP1-208ENST00000470179 NME9Q86XW9 330 aa21.18■□□□□ 0.98
PGAP1-208ENST00000470179 UPF2Q9HAU5 1272 aaKnown RBP21.18■□□□□ 0.98
PGAP1-208ENST00000470179 U2AF1L5P0DN76 240 aaPredicted RBP21.17■□□□□ 0.98
PGAP1-208ENST00000470179 U2AF1Q01081 240 aaKnown RBP eCLIP21.17■□□□□ 0.98
PGAP1-208ENST00000470179 FBLN1P23142 703 aa21.17■□□□□ 0.98
PGAP1-208ENST00000470179 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
PGAP1-208ENST00000470179 GGNBP2Q9H3C7 697 aa21.16■□□□□ 0.98
PGAP1-208ENST00000470179 MCM4P33991 863 aa21.15■□□□□ 0.98
PGAP1-208ENST00000470179 FTSJ3Q8IY81 847 aaKnown RBP21.15■□□□□ 0.98
PGAP1-208ENST00000470179 AATKQ6ZMQ8 1374 aa21.15■□□□□ 0.98
PGAP1-208ENST00000470179 ITPRIPQ8IWB1 547 aa21.15■□□□□ 0.98
PGAP1-208ENST00000470179 TNS3Q68CZ2 1445 aa21.15■□□□□ 0.98
PGAP1-208ENST00000470179 C22orf23Q9BZE7 217 aa21.15■□□□□ 0.98
PGAP1-208ENST00000470179 GOLGA6L3A6NEY3 463 aa21.14■□□□□ 0.97
PGAP1-208ENST00000470179 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
PGAP1-208ENST00000470179 COG3Q96JB2 828 aa21.14■□□□□ 0.97
PGAP1-208ENST00000470179 MED1Q15648 1581 aaPredicted RBP21.13■□□□□ 0.97
PGAP1-208ENST00000470179 SPATA31A3Q5VYP0 1347 aa21.13■□□□□ 0.97
PGAP1-208ENST00000470179 TRAK2O60296 914 aa21.13■□□□□ 0.97
PGAP1-208ENST00000470179 SLIT3O75094 1523 aa21.12■□□□□ 0.97
PGAP1-208ENST00000470179 RSPH6AQ9H0K4 717 aa21.12■□□□□ 0.97
PGAP1-208ENST00000470179 EXOSC9Q06265 439 aaKnown RBP21.11■□□□□ 0.97
PGAP1-208ENST00000470179 LNPKQ9C0E8 428 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 C1orf115Q9H7X2 142 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 ARHGEF10O15013 1369 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 ABTB2Q8N961 1025 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 RUNDC1Q96C34 613 aa21.11■□□□□ 0.97
PGAP1-208ENST00000470179 RBM42Q9BTD8 480 aaKnown RBP21.11■□□□□ 0.97
PGAP1-208ENST00000470179 ERBB4Q15303 1308 aa21.1■□□□□ 0.97
PGAP1-208ENST00000470179 DDX17Q92841 729 aaKnown RBP21.1■□□□□ 0.97
PGAP1-208ENST00000470179 CRYBG1Q9Y4K1 1723 aa21.1■□□□□ 0.97
PGAP1-208ENST00000470179 UBAP1LF5GYI3 381 aa21.09■□□□□ 0.97
PGAP1-208ENST00000470179 CD2BP2O95400 341 aaKnown RBP21.09■□□□□ 0.97
PGAP1-208ENST00000470179 TRIM27P14373 513 aa21.09■□□□□ 0.97
PGAP1-208ENST00000470179 NLRP6P59044 892 aa21.08■□□□□ 0.97
PGAP1-208ENST00000470179 XPCQ01831 940 aaPredicted RBP21.08■□□□□ 0.97
PGAP1-208ENST00000470179 GAS2L3Q86XJ1 694 aa21.08■□□□□ 0.96
PGAP1-208ENST00000470179 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.96
PGAP1-208ENST00000470179 COL16A1Q07092 1604 aaPredicted RBP21.08■□□□□ 0.96
PGAP1-208ENST00000470179 SSH1Q8WYL5 1049 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 255.7 ms