RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 C11orf95C9JLR9 678 aaPredicted RBP24.63■■□□□ 1.53
TRIM56-203ENST00000467847 KCNH5Q8NCM2 988 aa24.63■■□□□ 1.53
TRIM56-203ENST00000467847 AXIN2Q9Y2T1 843 aa24.63■■□□□ 1.53
TRIM56-203ENST00000467847 PEAK1Q9H792 1746 aa24.63■■□□□ 1.53
TRIM56-203ENST00000467847 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
TRIM56-203ENST00000467847 OVOS2A0A0J9YW53 1432 aa24.62■■□□□ 1.53
TRIM56-203ENST00000467847 OVOS2Q6IE36 1432 aa24.62■■□□□ 1.53
TRIM56-203ENST00000467847 SOX12O15370 315 aa24.62■■□□□ 1.53
TRIM56-203ENST00000467847 KTN1Q86UP2 1357 aaKnown RBP24.62■■□□□ 1.53
TRIM56-203ENST00000467847 WDR17Q8IZU2 1322 aa24.61■■□□□ 1.53
TRIM56-203ENST00000467847 ARHGEF25Q86VW2 580 aa24.61■■□□□ 1.53
TRIM56-203ENST00000467847 MON2Q7Z3U7 1717 aa24.61■■□□□ 1.53
TRIM56-203ENST00000467847 DDB1Q16531 1140 aa24.6■■□□□ 1.53
TRIM56-203ENST00000467847 SBF2Q86WG5 1849 aa24.6■■□□□ 1.53
TRIM56-203ENST00000467847 NFAT5O94916 1531 aa24.58■■□□□ 1.53
TRIM56-203ENST00000467847 CARD11Q9BXL7 1154 aa24.58■■□□□ 1.53
TRIM56-203ENST00000467847 SBNO2Q9Y2G9 1366 aa24.57■■□□□ 1.52
TRIM56-203ENST00000467847 CSB-PGBD3P0DP91 1061 aa24.57■■□□□ 1.52
TRIM56-203ENST00000467847 SPON1Q9HCB6 807 aa24.56■■□□□ 1.52
TRIM56-203ENST00000467847 RGPD3A6NKT7 1758 aaPredicted RBP24.55■■□□□ 1.52
TRIM56-203ENST00000467847 RGPD4Q7Z3J3 1758 aa24.55■■□□□ 1.52
TRIM56-203ENST00000467847 CDCA7Q9BWT1 371 aaPredicted RBP24.55■■□□□ 1.52
TRIM56-203ENST00000467847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.54■■□□□ 1.52
TRIM56-203ENST00000467847 CARD10Q9BWT7 1032 aa24.54■■□□□ 1.52
TRIM56-203ENST00000467847 ABCC6O95255 1503 aa24.52■■□□□ 1.52
TRIM56-203ENST00000467847 USP54Q70EL1 1684 aa24.51■■□□□ 1.51
TRIM56-203ENST00000467847 MARCH10Q8NA82 808 aaPredicted RBP24.51■■□□□ 1.51
TRIM56-203ENST00000467847 TMC1Q8TDI8 760 aa24.51■■□□□ 1.51
TRIM56-203ENST00000467847 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
TRIM56-203ENST00000467847 CD163L1Q9NR16 1453 aa24.51■■□□□ 1.51
TRIM56-203ENST00000467847 KCNQ2O43526 872 aa24.5■■□□□ 1.51
TRIM56-203ENST00000467847 BCL11BQ9C0K0 894 aaPredicted RBP24.5■■□□□ 1.51
TRIM56-203ENST00000467847 USP31Q70CQ4 1352 aa24.5■■□□□ 1.51
TRIM56-203ENST00000467847 PLSCR1O15162 318 aa24.49■■□□□ 1.51
TRIM56-203ENST00000467847 LTN1O94822 1766 aa24.49■■□□□ 1.51
TRIM56-203ENST00000467847 BCL9O00512 1426 aa24.48■■□□□ 1.51
TRIM56-203ENST00000467847 PTF1AQ7RTS3 328 aa24.48■■□□□ 1.51
TRIM56-203ENST00000467847 HDGFL2Q7Z4V5 671 aaPredicted RBP24.48■■□□□ 1.51
TRIM56-203ENST00000467847 NME9Q86XW9 330 aa24.48■■□□□ 1.51
TRIM56-203ENST00000467847 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
TRIM56-203ENST00000467847 NINLQ9Y2I6 1382 aa24.48■■□□□ 1.51
TRIM56-203ENST00000467847 EXOC5O00471 708 aa24.46■■□□□ 1.51
TRIM56-203ENST00000467847 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
TRIM56-203ENST00000467847 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
TRIM56-203ENST00000467847 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
TRIM56-203ENST00000467847 TNS2Q63HR2 1409 aa24.44■■□□□ 1.5
TRIM56-203ENST00000467847 ERBB3P21860 1342 aa24.42■■□□□ 1.5
TRIM56-203ENST00000467847 NLRP2Q9NX02 1062 aa24.42■■□□□ 1.5
TRIM56-203ENST00000467847 A0A1W2PP64 1363 aa24.42■■□□□ 1.5
TRIM56-203ENST00000467847 ANO8Q9HCE9 1232 aaPredicted RBP24.41■■□□□ 1.5
TRIM56-203ENST00000467847 PUS7Q96PZ0 661 aaKnown RBP24.4■■□□□ 1.5
TRIM56-203ENST00000467847 PROM2Q8N271 834 aa24.39■■□□□ 1.49
TRIM56-203ENST00000467847 CASZ1Q86V15 1759 aa24.38■■□□□ 1.49
TRIM56-203ENST00000467847 NHSQ6T4R5 1651 aa24.37■■□□□ 1.49
TRIM56-203ENST00000467847 ANKRD24Q8TF21 1146 aa24.37■■□□□ 1.49
TRIM56-203ENST00000467847 IL2RBP14784 551 aa24.36■■□□□ 1.49
TRIM56-203ENST00000467847 TXNRD1Q16881 649 aa24.35■■□□□ 1.49
TRIM56-203ENST00000467847 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
TRIM56-203ENST00000467847 TESK2Q96S53 571 aa24.34■■□□□ 1.49
TRIM56-203ENST00000467847 KAT6BQ8WYB5 2073 aa24.34■■□□□ 1.49
TRIM56-203ENST00000467847 ACSBG1Q96GR2 724 aa24.33■■□□□ 1.49
TRIM56-203ENST00000467847 STK32BQ9NY57 414 aa24.32■■□□□ 1.48
TRIM56-203ENST00000467847 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
TRIM56-203ENST00000467847 PDGFDQ9GZP0 370 aaPredicted RBP24.31■■□□□ 1.48
TRIM56-203ENST00000467847 SLC24A1O60721 1099 aa24.3■■□□□ 1.48
TRIM56-203ENST00000467847 IP6K1Q92551 441 aa24.3■■□□□ 1.48
TRIM56-203ENST00000467847 BTAF1O14981 1849 aa24.29■■□□□ 1.48
TRIM56-203ENST00000467847 ZBTB7AO95365 584 aa24.29■■□□□ 1.48
TRIM56-203ENST00000467847 ZNF784Q8NCA9 323 aaPredicted RBP24.28■■□□□ 1.48
TRIM56-203ENST00000467847 LTV1Q96GA3 475 aaPredicted RBP24.28■■□□□ 1.48
TRIM56-203ENST00000467847 COG3Q96JB2 828 aa24.28■■□□□ 1.48
TRIM56-203ENST00000467847 SLC15A2Q16348 729 aa24.27■■□□□ 1.48
TRIM56-203ENST00000467847 ATF5Q9Y2D1 282 aaPredicted RBP24.25■■□□□ 1.47
TRIM56-203ENST00000467847 MYOM1P52179 1685 aa24.24■■□□□ 1.47
TRIM56-203ENST00000467847 SENP3-EIF4A1A0A087X0R7 540 aa24.24■■□□□ 1.47
TRIM56-203ENST00000467847 MAP3K19Q56UN5 1328 aa24.24■■□□□ 1.47
TRIM56-203ENST00000467847 ANKRD36BQ8N2N9 1353 aa24.24■■□□□ 1.47
TRIM56-203ENST00000467847 AMPHP49418 695 aa24.23■■□□□ 1.47
TRIM56-203ENST00000467847 HOXC9P31274 260 aa24.22■■□□□ 1.47
TRIM56-203ENST00000467847 DDX54Q8TDD1 881 aaKnown RBP24.22■■□□□ 1.47
TRIM56-203ENST00000467847 RGPD2P0DJD1 1756 aa24.21■■□□□ 1.47
TRIM56-203ENST00000467847 PAPPAQ13219 1627 aa24.21■■□□□ 1.47
TRIM56-203ENST00000467847 FBLN1P23142 703 aa24.21■■□□□ 1.47
TRIM56-203ENST00000467847 PTGER2P43116 358 aa24.21■■□□□ 1.47
TRIM56-203ENST00000467847 USP47Q96K76 1375 aa24.2■■□□□ 1.46
TRIM56-203ENST00000467847 TMF1P82094 1093 aa24.2■■□□□ 1.46
TRIM56-203ENST00000467847 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
TRIM56-203ENST00000467847 FHDC1Q9C0D6 1143 aaPredicted RBP24.19■■□□□ 1.46
TRIM56-203ENST00000467847 MTFR1LQ9H019 292 aa24.19■■□□□ 1.46
TRIM56-203ENST00000467847 SYT17Q9BSW7 474 aa24.17■■□□□ 1.46
TRIM56-203ENST00000467847 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
TRIM56-203ENST00000467847 DOT1LQ8TEK3 1739 aa24.15■■□□□ 1.46
TRIM56-203ENST00000467847 SHANK3Q9BYB0 1731 aa24.15■■□□□ 1.46
TRIM56-203ENST00000467847 FYB1O15117 783 aa24.15■■□□□ 1.46
TRIM56-203ENST00000467847 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
TRIM56-203ENST00000467847 GGNBP2Q9H3C7 697 aa24.15■■□□□ 1.46
TRIM56-203ENST00000467847 LRRC4BQ9NT99 713 aa24.15■■□□□ 1.46
TRIM56-203ENST00000467847 KIF20BQ96Q89 1820 aa24.14■■□□□ 1.46
TRIM56-203ENST00000467847 C1QTNF8P60827 252 aa24.14■■□□□ 1.45
TRIM56-203ENST00000467847 ZNF827Q17R98 1081 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms