RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 DEFB132Q7Z7B7 95 aa16.73■□□□□ 0.27
CTNS-205ENST00000467663 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
CTNS-205ENST00000467663 COL18A1P39060 1754 aa16.73■□□□□ 0.27
CTNS-205ENST00000467663 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
CTNS-205ENST00000467663 NFAT5O94916 1531 aa16.72■□□□□ 0.27
CTNS-205ENST00000467663 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
CTNS-205ENST00000467663 NME9Q86XW9 330 aa16.72■□□□□ 0.27
CTNS-205ENST00000467663 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
CTNS-205ENST00000467663 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
CTNS-205ENST00000467663 SOX12O15370 315 aa16.7■□□□□ 0.26
CTNS-205ENST00000467663 TMF1P82094 1093 aa16.7■□□□□ 0.26
CTNS-205ENST00000467663 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
CTNS-205ENST00000467663 BAG6P46379 1132 aa16.69■□□□□ 0.26
CTNS-205ENST00000467663 PDE3BQ13370 1112 aa16.69■□□□□ 0.26
CTNS-205ENST00000467663 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
CTNS-205ENST00000467663 ABCC6O95255 1503 aa16.68■□□□□ 0.26
CTNS-205ENST00000467663 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
CTNS-205ENST00000467663 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
CTNS-205ENST00000467663 DISP2A7MBM2 1401 aa16.66■□□□□ 0.26
CTNS-205ENST00000467663 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
CTNS-205ENST00000467663 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
CTNS-205ENST00000467663 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
CTNS-205ENST00000467663 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
CTNS-205ENST00000467663 CDCA8Q53HL2 280 aa16.65■□□□□ 0.26
CTNS-205ENST00000467663 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
CTNS-205ENST00000467663 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
CTNS-205ENST00000467663 TRIM37O94972 964 aa16.64■□□□□ 0.25
CTNS-205ENST00000467663 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
CTNS-205ENST00000467663 EN1Q05925 392 aaPredicted RBP16.64■□□□□ 0.25
CTNS-205ENST00000467663 DDB1Q16531 1140 aa16.62■□□□□ 0.25
CTNS-205ENST00000467663 ERBB3P21860 1342 aa16.62■□□□□ 0.25
CTNS-205ENST00000467663 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
CTNS-205ENST00000467663 TNS1Q9HBL0 1735 aaKnown RBP16.62■□□□□ 0.25
CTNS-205ENST00000467663 RGPD5Q99666 1765 aa16.61■□□□□ 0.25
CTNS-205ENST00000467663 COG3Q96JB2 828 aa16.61■□□□□ 0.25
CTNS-205ENST00000467663 CAMKK2Q96RR4 588 aa16.61■□□□□ 0.25
CTNS-205ENST00000467663 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
CTNS-205ENST00000467663 APBA3O96018 575 aa16.6■□□□□ 0.25
CTNS-205ENST00000467663 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
CTNS-205ENST00000467663 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
CTNS-205ENST00000467663 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
CTNS-205ENST00000467663 IP6K1Q92551 441 aa16.59■□□□□ 0.25
CTNS-205ENST00000467663 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
CTNS-205ENST00000467663 FYB1O15117 783 aa16.58■□□□□ 0.24
CTNS-205ENST00000467663 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
CTNS-205ENST00000467663 PEAK1Q9H792 1746 aa16.58■□□□□ 0.24
CTNS-205ENST00000467663 LTN1O94822 1766 aa16.58■□□□□ 0.24
CTNS-205ENST00000467663 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
CTNS-205ENST00000467663 BCL9O00512 1426 aa16.57■□□□□ 0.24
CTNS-205ENST00000467663 MARCH10Q8NA82 808 aaPredicted RBP16.57■□□□□ 0.24
CTNS-205ENST00000467663 NLRP2Q9NX02 1062 aa16.57■□□□□ 0.24
CTNS-205ENST00000467663 MAP3K19Q56UN5 1328 aa16.56■□□□□ 0.24
CTNS-205ENST00000467663 EXOC5O00471 708 aa16.56■□□□□ 0.24
CTNS-205ENST00000467663 GGNBP2Q9H3C7 697 aa16.55■□□□□ 0.24
CTNS-205ENST00000467663 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
CTNS-205ENST00000467663 IL2RBP14784 551 aa16.54■□□□□ 0.24
CTNS-205ENST00000467663 FBLN1P23142 703 aa16.54■□□□□ 0.24
CTNS-205ENST00000467663 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
CTNS-205ENST00000467663 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
CTNS-205ENST00000467663 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
CTNS-205ENST00000467663 HOXC9P31274 260 aa16.53■□□□□ 0.24
CTNS-205ENST00000467663 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
CTNS-205ENST00000467663 MYOM1P52179 1685 aa16.53■□□□□ 0.24
CTNS-205ENST00000467663 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.24
CTNS-205ENST00000467663 AMPHP49418 695 aa16.52■□□□□ 0.24
CTNS-205ENST00000467663 RTL1A6NKG5 1358 aa16.51■□□□□ 0.23
CTNS-205ENST00000467663 PLSCR1O15162 318 aa16.51■□□□□ 0.23
CTNS-205ENST00000467663 R3HDM1Q15032 1099 aaKnown RBP16.5■□□□□ 0.23
CTNS-205ENST00000467663 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
CTNS-205ENST00000467663 PTF1AQ7RTS3 328 aa16.5■□□□□ 0.23
CTNS-205ENST00000467663 LTV1Q96GA3 475 aaPredicted RBP16.5■□□□□ 0.23
CTNS-205ENST00000467663 NSD3Q9BZ95 1437 aa16.5■□□□□ 0.23
CTNS-205ENST00000467663 RREB1Q92766 1687 aa16.5■□□□□ 0.23
CTNS-205ENST00000467663 SBF2Q86WG5 1849 aa16.49■□□□□ 0.23
CTNS-205ENST00000467663 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
CTNS-205ENST00000467663 FAM208AQ9UK61 1670 aaKnown RBP16.48■□□□□ 0.23
CTNS-205ENST00000467663 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
CTNS-205ENST00000467663 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
CTNS-205ENST00000467663 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
CTNS-205ENST00000467663 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
CTNS-205ENST00000467663 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.22
CTNS-205ENST00000467663 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.22
CTNS-205ENST00000467663 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
CTNS-205ENST00000467663 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
CTNS-205ENST00000467663 INSRP06213 1382 aa16.45■□□□□ 0.22
CTNS-205ENST00000467663 LRP5O75197 1615 aa16.45■□□□□ 0.22
CTNS-205ENST00000467663 FLT4P35916 1363 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 KCNQ2O43526 872 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 PROM2Q8N271 834 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
CTNS-205ENST00000467663 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
CTNS-205ENST00000467663 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
CTNS-205ENST00000467663 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
CTNS-205ENST00000467663 DDX54Q8TDD1 881 aaKnown RBP16.41■□□□□ 0.22
CTNS-205ENST00000467663 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
CTNS-205ENST00000467663 MEGF6O75095 1541 aa16.4■□□□□ 0.22
CTNS-205ENST00000467663 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms