RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 OCSTAMPQ9BR26 566 aa10.68□□□□□ -0.7
PRPF40A-205ENST00000467114 CDV3Q9UKY7 258 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-205ENST00000467114 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
PRPF40A-205ENST00000467114 RFC5P40937 340 aa10.67□□□□□ -0.7
PRPF40A-205ENST00000467114 C6orf118Q5T5N4 469 aa10.67□□□□□ -0.7
PRPF40A-205ENST00000467114 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
PRPF40A-205ENST00000467114 IRF7Q92985 503 aa10.67□□□□□ -0.7
PRPF40A-205ENST00000467114 SOBPA7XYQ1 873 aa10.66□□□□□ -0.7
PRPF40A-205ENST00000467114 UPP2O95045 317 aa10.66□□□□□ -0.7
PRPF40A-205ENST00000467114 PTK2Q05397 1052 aa10.66□□□□□ -0.7
PRPF40A-205ENST00000467114 EPS8L1Q8TE68 723 aa10.66□□□□□ -0.7
PRPF40A-205ENST00000467114 SLC10A4Q96EP9 437 aa10.66□□□□□ -0.7
PRPF40A-205ENST00000467114 HMX1Q9NP08 348 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-205ENST00000467114 BMP2P12643 396 aa10.65□□□□□ -0.7
PRPF40A-205ENST00000467114 VEGFBP49765 207 aa10.65□□□□□ -0.7
PRPF40A-205ENST00000467114 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-205ENST00000467114 KCTD15Q96SI1 283 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-205ENST00000467114 TSEN34Q9BSV6 310 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-205ENST00000467114 STK17AQ9UEE5 414 aa10.65□□□□□ -0.7
PRPF40A-205ENST00000467114 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
PRPF40A-205ENST00000467114 MAN1A2O60476 641 aa10.63□□□□□ -0.71
PRPF40A-205ENST00000467114 GMPRP36959 345 aa10.63□□□□□ -0.71
PRPF40A-205ENST00000467114 ADAM32Q8TC27 787 aa10.63□□□□□ -0.71
PRPF40A-205ENST00000467114 PCMTD1Q96MG8 357 aaPredicted RBP10.63□□□□□ -0.71
PRPF40A-205ENST00000467114 PGPEP1Q9NXJ5 209 aa10.63□□□□□ -0.71
PRPF40A-205ENST00000467114 SOS2Q07890 1332 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-205ENST00000467114 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
PRPF40A-205ENST00000467114 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
PRPF40A-205ENST00000467114 Q6ZVU0 165 aa10.62□□□□□ -0.71
PRPF40A-205ENST00000467114 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-205ENST00000467114 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
PRPF40A-205ENST00000467114 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
PRPF40A-205ENST00000467114 VSIG8P0DPA2 414 aa10.59□□□□□ -0.71
PRPF40A-205ENST00000467114 CBLBQ13191 982 aa10.59□□□□□ -0.71
PRPF40A-205ENST00000467114 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
PRPF40A-205ENST00000467114 DNMT3LQ9UJW3 386 aa10.59□□□□□ -0.71
PRPF40A-205ENST00000467114 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
PRPF40A-205ENST00000467114 NBPF20Q3BBV1 942 aa10.57□□□□□ -0.72
PRPF40A-205ENST00000467114 SPINT1O43278 529 aa10.56□□□□□ -0.72
PRPF40A-205ENST00000467114 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
PRPF40A-205ENST00000467114 BRPF1P55201 1214 aaPredicted RBP10.56□□□□□ -0.72
PRPF40A-205ENST00000467114 TTLL8A6PVC2 850 aa10.55□□□□□ -0.72
PRPF40A-205ENST00000467114 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.55□□□□□ -0.722e-6■□□□□ 8.3
PRPF40A-205ENST00000467114 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
PRPF40A-205ENST00000467114 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-205ENST00000467114 ESPNB1AK53 854 aa10.53□□□□□ -0.72
PRPF40A-205ENST00000467114 GJD4Q96KN9 370 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-205ENST00000467114 ZSCAN1Q8NBB4 408 aa10.52□□□□□ -0.73
PRPF40A-205ENST00000467114 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
PRPF40A-205ENST00000467114 TMPRSS4Q9NRS4 437 aa10.51□□□□□ -0.73
PRPF40A-205ENST00000467114 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
PRPF40A-205ENST00000467114 FIGNL2A6NMB9 653 aa10.49□□□□□ -0.73
PRPF40A-205ENST00000467114 ZBBXA8MT70 800 aa10.49□□□□□ -0.73
PRPF40A-205ENST00000467114 ERVH48-1M5A8F1 160 aa10.49□□□□□ -0.73
PRPF40A-205ENST00000467114 LILRA1O75019 489 aa10.49□□□□□ -0.73
PRPF40A-205ENST00000467114 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
PRPF40A-205ENST00000467114 SEPT12Q8IYM1 358 aa10.49□□□□□ -0.73
PRPF40A-205ENST00000467114 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
PRPF40A-205ENST00000467114 RELBQ01201 579 aa10.48□□□□□ -0.73
PRPF40A-205ENST00000467114 PTSQ03393 145 aa10.48□□□□□ -0.73
PRPF40A-205ENST00000467114 SOCS7O14512 581 aa10.47□□□□□ -0.73
PRPF40A-205ENST00000467114 CTSOP43234 321 aaPredicted RBP10.47□□□□□ -0.73
PRPF40A-205ENST00000467114 RAB15P59190 212 aa10.47□□□□□ -0.73
PRPF40A-205ENST00000467114 TPRNQ4KMQ1 711 aa10.47□□□□□ -0.73
PRPF40A-205ENST00000467114 BANK1Q8NDB2 785 aa10.47□□□□□ -0.73
PRPF40A-205ENST00000467114 ADH1AP07327 375 aa10.46□□□□□ -0.73
PRPF40A-205ENST00000467114 ADD1P35611 737 aaKnown RBP10.46□□□□□ -0.73
PRPF40A-205ENST00000467114 KDF1Q8NAX2 398 aaPredicted RBP10.46□□□□□ -0.73
PRPF40A-205ENST00000467114 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
PRPF40A-205ENST00000467114 FBXO45P0C2W1 286 aa10.45□□□□□ -0.74
PRPF40A-205ENST00000467114 SLC35F4A4IF30 521 aa10.44□□□□□ -0.74
PRPF40A-205ENST00000467114 CCDC155Q8N6L0 562 aa10.44□□□□□ -0.74
PRPF40A-205ENST00000467114 ZNF395Q9H8N7 513 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-205ENST00000467114 PTGIRP43119 386 aa10.43□□□□□ -0.74
PRPF40A-205ENST00000467114 RNF217Q8TC41 542 aa10.43□□□□□ -0.74
PRPF40A-205ENST00000467114 NANOS1Q8WY41 292 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-205ENST00000467114 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
PRPF40A-205ENST00000467114 POLMQ9NP87 494 aaPredicted RBP10.43□□□□□ -0.74
PRPF40A-205ENST00000467114 PCDHB9Q9Y5E1 797 aa10.43□□□□□ -0.74
PRPF40A-205ENST00000467114 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-205ENST00000467114 CCDC125Q86Z20 511 aa10.42□□□□□ -0.74
PRPF40A-205ENST00000467114 GPR37L1O60883 481 aa10.41□□□□□ -0.74
PRPF40A-205ENST00000467114 GPR161Q8N6U8 529 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-205ENST00000467114 MTMR14Q8NCE2 650 aa10.41□□□□□ -0.74
PRPF40A-205ENST00000467114 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-205ENST00000467114 NR1H3Q13133 447 aa10.4□□□□□ -0.74
PRPF40A-205ENST00000467114 CYLDQ9NQC7 956 aa10.4□□□□□ -0.74
PRPF40A-205ENST00000467114 FOXD4L5Q5VV16 416 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-205ENST00000467114 ITGA6P23229 1130 aa10.38□□□□□ -0.75
PRPF40A-205ENST00000467114 KRT76Q01546 638 aa10.38□□□□□ -0.75
PRPF40A-205ENST00000467114 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
PRPF40A-205ENST00000467114 SENP3-EIF4A1A0A087X0R7 540 aa10.37□□□□□ -0.75
PRPF40A-205ENST00000467114 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
PRPF40A-205ENST00000467114 ZNF592Q92610 1267 aa10.37□□□□□ -0.75
PRPF40A-205ENST00000467114 SNRKQ9NRH2 765 aa10.37□□□□□ -0.75
PRPF40A-205ENST00000467114 APBB1O00213 710 aa10.36□□□□□ -0.75
PRPF40A-205ENST00000467114 RNF144AP50876 292 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-205ENST00000467114 ERVK-9P63128 1117 aa10.36□□□□□ -0.75
PRPF40A-205ENST00000467114 ATP5J2-PTCD1G3V325 749 aa10.35□□□□□ -0.75
PRPF40A-205ENST00000467114 ZNF330Q9Y3S2 320 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms