RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 FSHRP23945 695 aa8.13□□□□□ -1.11
TM9SF3-203ENST00000464654 MTMR14Q8NCE2 650 aa8.13□□□□□ -1.11
TM9SF3-203ENST00000464654 NBPF20Q3BBV1 942 aa8.12□□□□□ -1.11
TM9SF3-203ENST00000464654 LCE2AQ5TA79 106 aaPredicted RBP8.12□□□□□ -1.11
TM9SF3-203ENST00000464654 CCDC116Q8IYX3 515 aa8.12□□□□□ -1.11
TM9SF3-203ENST00000464654 EMILIN1Q9Y6C2 1016 aa8.12□□□□□ -1.11
TM9SF3-203ENST00000464654 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
TM9SF3-203ENST00000464654 ZIC2O95409 532 aaPredicted RBP8.11□□□□□ -1.11
TM9SF3-203ENST00000464654 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
TM9SF3-203ENST00000464654 ITPKCQ96DU7 683 aa8.11□□□□□ -1.11
TM9SF3-203ENST00000464654 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
TM9SF3-203ENST00000464654 NDUFB9Q9Y6M9 179 aa8.11□□□□□ -1.11
TM9SF3-203ENST00000464654 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
TM9SF3-203ENST00000464654 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
TM9SF3-203ENST00000464654 MCCD1P59942 119 aaPredicted RBP8.09□□□□□ -1.11
TM9SF3-203ENST00000464654 MRPL14Q6P1L8 145 aaKnown RBP8.09□□□□□ -1.11
TM9SF3-203ENST00000464654 SNRKQ9NRH2 765 aa8.09□□□□□ -1.11
TM9SF3-203ENST00000464654 GPR37L1O60883 481 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 BMP1P13497 986 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 SCARF1Q14162 830 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 CCDC125Q86Z20 511 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 SEPT12Q8IYM1 358 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
TM9SF3-203ENST00000464654 ESPNB1AK53 854 aa8.07□□□□□ -1.12
TM9SF3-203ENST00000464654 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
TM9SF3-203ENST00000464654 TRIM52Q96A61 297 aa8.07□□□□□ -1.12
TM9SF3-203ENST00000464654 PRM3Q9NNZ6 103 aa8.07□□□□□ -1.12
TM9SF3-203ENST00000464654 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
TM9SF3-203ENST00000464654 NR1H3Q13133 447 aa8.06□□□□□ -1.12
TM9SF3-203ENST00000464654 INTS6LQ5JSJ4 861 aaKnown RBP8.06□□□□□ -1.12
TM9SF3-203ENST00000464654 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
TM9SF3-203ENST00000464654 ZFP42Q96MM3 310 aa8.06□□□□□ -1.12
TM9SF3-203ENST00000464654 UPP2O95045 317 aa8.05□□□□□ -1.12
TM9SF3-203ENST00000464654 Q6ZVU0 165 aa8.05□□□□□ -1.12
TM9SF3-203ENST00000464654 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
TM9SF3-203ENST00000464654 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
TM9SF3-203ENST00000464654 TSEN34Q9BSV6 310 aaKnown RBP8.04□□□□□ -1.12
TM9SF3-203ENST00000464654 WFS1O76024 890 aa8.03□□□□□ -1.12
TM9SF3-203ENST00000464654 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
TM9SF3-203ENST00000464654 PURBQ96QR8 312 aaKnown RBP8.03□□□□□ -1.12
TM9SF3-203ENST00000464654 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
TM9SF3-203ENST00000464654 NPAS3Q8IXF0 933 aa8.01□□□□□ -1.13
TM9SF3-203ENST00000464654 PCDHB9Q9Y5E1 797 aa8.01□□□□□ -1.13
TM9SF3-203ENST00000464654 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
TM9SF3-203ENST00000464654 MCM6Q14566 821 aa8□□□□□ -1.13
TM9SF3-203ENST00000464654 TBC1D2BQ9UPU7 963 aa8□□□□□ -1.13
TM9SF3-203ENST00000464654 BMP2P12643 396 aa7.99□□□□□ -1.13
TM9SF3-203ENST00000464654 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
TM9SF3-203ENST00000464654 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 SPINT1O43278 529 aa7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 LILRA1O75019 489 aa7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 GIGYF1O75420 1035 aaPredicted RBP7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 CBLBQ13191 982 aa7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 C6orf118Q5T5N4 469 aa7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 ZNF784Q8NCA9 323 aaPredicted RBP7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
TM9SF3-203ENST00000464654 IRF5Q13568 498 aa7.97□□□□□ -1.13
TM9SF3-203ENST00000464654 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
TM9SF3-203ENST00000464654 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
TM9SF3-203ENST00000464654 MAN1A2O60476 641 aa7.96□□□□□ -1.14
TM9SF3-203ENST00000464654 ADH1AP07327 375 aa7.96□□□□□ -1.14
TM9SF3-203ENST00000464654 EIF4G2P78344 907 aaKnown RBP eCLIP7.96□□□□□ -1.14
TM9SF3-203ENST00000464654 WIPF1O43516 503 aa7.95□□□□□ -1.14
TM9SF3-203ENST00000464654 RAB15P59190 212 aa7.95□□□□□ -1.14
TM9SF3-203ENST00000464654 FLIIQ13045 1269 aa7.95□□□□□ -1.14
TM9SF3-203ENST00000464654 WASHC4Q2M389 1173 aa7.95□□□□□ -1.14
TM9SF3-203ENST00000464654 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
TM9SF3-203ENST00000464654 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
TM9SF3-203ENST00000464654 ADD1P35611 737 aaKnown RBP7.93□□□□□ -1.14
TM9SF3-203ENST00000464654 ERVK-9P63128 1117 aa7.93□□□□□ -1.14
TM9SF3-203ENST00000464654 SUZ12Q15022 739 aaKnown RBP7.93□□□□□ -1.14
TM9SF3-203ENST00000464654 SLC16A10Q8TF71 515 aa7.93□□□□□ -1.14
TM9SF3-203ENST00000464654 CEP126Q9P2H0 1117 aa7.93□□□□□ -1.14
TM9SF3-203ENST00000464654 H3BM21 787 aa7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 SOX11P35716 441 aa7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 PTGIRP43119 386 aa7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.92□□□□□ -1.147e-6■■□□□ 14.4
TM9SF3-203ENST00000464654 CC2D2BQ6DHV5 1058 aa7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 KDF1Q8NAX2 398 aaPredicted RBP7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 AGBL1Q96MI9 1066 aa7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
TM9SF3-203ENST00000464654 ABL2P42684 1182 aa7.91□□□□□ -1.14
TM9SF3-203ENST00000464654 RELBQ01201 579 aa7.91□□□□□ -1.14
TM9SF3-203ENST00000464654 CYLDQ9NQC7 956 aa7.91□□□□□ -1.14
TM9SF3-203ENST00000464654 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
TM9SF3-203ENST00000464654 SOBPA7XYQ1 873 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 CYP2U1Q7Z449 544 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 PHTF2Q8N3S3 785 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 IRF7Q92985 503 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 CHIC2Q9UKJ5 165 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 PCDHB11Q9Y5F2 797 aa7.89□□□□□ -1.15
TM9SF3-203ENST00000464654 TRAK2O60296 914 aa7.88□□□□□ -1.15
TM9SF3-203ENST00000464654 VSIG8P0DPA2 414 aa7.88□□□□□ -1.15
TM9SF3-203ENST00000464654 CTSOP43234 321 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms