RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 PEAK1Q9H792 1746 aa29.06■■■□□ 2.24
CD58-204ENST00000464088 CDCA8Q53HL2 280 aa29.04■■■□□ 2.24
CD58-204ENST00000464088 ABTB2Q8N961 1025 aa29.04■■■□□ 2.24
CD58-204ENST00000464088 PPP1R1BQ9UD71 204 aaPredicted RBP29.04■■■□□ 2.24
CD58-204ENST00000464088 CD163L1Q9NR16 1453 aa29.04■■■□□ 2.24
CD58-204ENST00000464088 SBF2Q86WG5 1849 aa29.04■■■□□ 2.24
CD58-204ENST00000464088 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
CD58-204ENST00000464088 SLC12A5Q9H2X9 1139 aa29.02■■■□□ 2.24
CD58-204ENST00000464088 COL5A2P05997 1499 aaPredicted RBP29.02■■■□□ 2.24
CD58-204ENST00000464088 MYOM1P52179 1685 aa29.01■■■□□ 2.23
CD58-204ENST00000464088 USP6P35125 1406 aa29.01■■■□□ 2.23
CD58-204ENST00000464088 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
CD58-204ENST00000464088 DCAF8L1A6NGE4 600 aa29■■■□□ 2.23
CD58-204ENST00000464088 PLSCR1O15162 318 aa28.99■■■□□ 2.23
CD58-204ENST00000464088 TMC1Q8TDI8 760 aa28.99■■■□□ 2.23
CD58-204ENST00000464088 OVOS2A0A0G2JMS6 1433 aa28.99■■■□□ 2.23
CD58-204ENST00000464088 OVOS2A0A0J9YW53 1432 aa28.99■■■□□ 2.23
CD58-204ENST00000464088 OVOS2Q6IE36 1432 aa28.99■■■□□ 2.23
CD58-204ENST00000464088 CASZ1Q86V15 1759 aa28.98■■■□□ 2.23
CD58-204ENST00000464088 CRB1P82279 1406 aa28.98■■■□□ 2.23
CD58-204ENST00000464088 GCP02774 474 aa28.98■■■□□ 2.23
CD58-204ENST00000464088 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
CD58-204ENST00000464088 BRD4O60885 1362 aaPredicted RBP28.98■■■□□ 2.23
CD58-204ENST00000464088 ZNF692Q9BU19 519 aaPredicted RBP28.97■■■□□ 2.23
CD58-204ENST00000464088 LRRC37A3O60309 1634 aa28.95■■■□□ 2.23
CD58-204ENST00000464088 A0A1W2PP64 1363 aa28.94■■■□□ 2.22
CD58-204ENST00000464088 KTN1Q86UP2 1357 aaKnown RBP28.92■■■□□ 2.22
CD58-204ENST00000464088 TERF2IPQ9NYB0 399 aa28.91■■■□□ 2.22
CD58-204ENST00000464088 AATKQ6ZMQ8 1374 aa28.9■■■□□ 2.22
CD58-204ENST00000464088 ANKRD36BQ8N2N9 1353 aa28.9■■■□□ 2.22
CD58-204ENST00000464088 HDGFL2Q7Z4V5 671 aaPredicted RBP28.9■■■□□ 2.22
CD58-204ENST00000464088 ANO8Q9HCE9 1232 aaPredicted RBP28.9■■■□□ 2.22
CD58-204ENST00000464088 WNK3Q9BYP7 1800 aa28.9■■■□□ 2.22
CD58-204ENST00000464088 BCL11BQ9C0K0 894 aaPredicted RBP28.89■■■□□ 2.22
CD58-204ENST00000464088 KIF7Q2M1P5 1343 aa28.89■■■□□ 2.21
CD58-204ENST00000464088 BCL9O00512 1426 aa28.88■■■□□ 2.21
CD58-204ENST00000464088 DDB1Q16531 1140 aa28.88■■■□□ 2.21
CD58-204ENST00000464088 SLIT3O75094 1523 aa28.88■■■□□ 2.21
CD58-204ENST00000464088 TTC21BQ7Z4L5 1316 aa28.88■■■□□ 2.21
CD58-204ENST00000464088 COL18A1P39060 1754 aa28.88■■■□□ 2.21
CD58-204ENST00000464088 PIK3C2AO00443 1686 aa28.87■■■□□ 2.21
CD58-204ENST00000464088 EDC4Q6P2E9 1401 aaKnown RBP28.86■■■□□ 2.21
CD58-204ENST00000464088 PROM2Q8N271 834 aa28.85■■■□□ 2.21
CD58-204ENST00000464088 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
CD58-204ENST00000464088 TTC21AQ8NDW8 1320 aa28.85■■■□□ 2.21
CD58-204ENST00000464088 PTF1AQ7RTS3 328 aa28.84■■■□□ 2.21
CD58-204ENST00000464088 PDGFDQ9GZP0 370 aaPredicted RBP28.83■■■□□ 2.21
CD58-204ENST00000464088 CCDC7Q96M83 1385 aa28.83■■■□□ 2.21
CD58-204ENST00000464088 PTGER2P43116 358 aa28.82■■■□□ 2.2
CD58-204ENST00000464088 WASHC2AQ641Q2 1341 aa28.82■■■□□ 2.2
CD58-204ENST00000464088 NLRP6P59044 892 aa28.8■■■□□ 2.2
CD58-204ENST00000464088 TOM1L2Q6ZVM7 507 aa28.8■■■□□ 2.2
CD58-204ENST00000464088 MARCH10Q8NA82 808 aaPredicted RBP28.8■■■□□ 2.2
CD58-204ENST00000464088 CDCA7Q9BWT1 371 aaPredicted RBP28.8■■■□□ 2.2
CD58-204ENST00000464088 USP54Q70EL1 1684 aa28.8■■■□□ 2.2
CD58-204ENST00000464088 WDR17Q8IZU2 1322 aa28.79■■■□□ 2.2
CD58-204ENST00000464088 CARD14Q9BXL6 1004 aa28.79■■■□□ 2.2
CD58-204ENST00000464088 UTRNP46939 3433 aa28.77■■■□□ 2.2
CD58-204ENST00000464088 ZBTB7AO95365 584 aa28.77■■■□□ 2.2
CD58-204ENST00000464088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.77■■■□□ 2.2
CD58-204ENST00000464088 USP31Q70CQ4 1352 aa28.76■■■□□ 2.2
CD58-204ENST00000464088 ZBTB7CA1YPR0 619 aa28.76■■■□□ 2.19
CD58-204ENST00000464088 ZNF784Q8NCA9 323 aaPredicted RBP28.76■■■□□ 2.19
CD58-204ENST00000464088 AXIN2Q9Y2T1 843 aa28.76■■■□□ 2.19
CD58-204ENST00000464088 NME9Q86XW9 330 aa28.75■■■□□ 2.19
CD58-204ENST00000464088 CHD4Q14839 1912 aa28.75■■■□□ 2.19
CD58-204ENST00000464088 RGPD5Q99666 1765 aa28.74■■■□□ 2.19
CD58-204ENST00000464088 TXNRD1Q16881 649 aa28.73■■■□□ 2.19
CD58-204ENST00000464088 NSD3Q9BZ95 1437 aa28.73■■■□□ 2.19
CD58-204ENST00000464088 SLC15A2Q16348 729 aa28.72■■■□□ 2.19
CD58-204ENST00000464088 PANK3Q9H999 370 aa28.72■■■□□ 2.19
CD58-204ENST00000464088 STK32BQ9NY57 414 aa28.72■■■□□ 2.19
CD58-204ENST00000464088 ATF5Q9Y2D1 282 aaPredicted RBP28.72■■■□□ 2.19
CD58-204ENST00000464088 SYT17Q9BSW7 474 aa28.71■■■□□ 2.19
CD58-204ENST00000464088 KIF20BQ96Q89 1820 aa28.71■■■□□ 2.19
CD58-204ENST00000464088 ARHGEF25Q86VW2 580 aa28.7■■■□□ 2.18
CD58-204ENST00000464088 SGIP1Q9BQI5 828 aa28.7■■■□□ 2.18
CD58-204ENST00000464088 CARD10Q9BWT7 1032 aa28.7■■■□□ 2.18
CD58-204ENST00000464088 FHDC1Q9C0D6 1143 aaPredicted RBP28.7■■■□□ 2.18
CD58-204ENST00000464088 MTFR1LQ9H019 292 aa28.68■■■□□ 2.18
CD58-204ENST00000464088 FYB1O15117 783 aa28.67■■■□□ 2.18
CD58-204ENST00000464088 KCNH5Q8NCM2 988 aa28.66■■■□□ 2.18
CD58-204ENST00000464088 NHSQ6T4R5 1651 aa28.65■■■□□ 2.18
CD58-204ENST00000464088 EXOC5O00471 708 aa28.65■■■□□ 2.18
CD58-204ENST00000464088 NFAT5O94916 1531 aa28.64■■■□□ 2.18
CD58-204ENST00000464088 ABCC6O95255 1503 aa28.63■■■□□ 2.17
CD58-204ENST00000464088 PAPPAQ13219 1627 aa28.62■■■□□ 2.17
CD58-204ENST00000464088 MAP3K5Q99683 1374 aa28.62■■■□□ 2.17
CD58-204ENST00000464088 TNS2Q63HR2 1409 aa28.61■■■□□ 2.17
CD58-204ENST00000464088 GGNBP2Q9H3C7 697 aa28.61■■■□□ 2.17
CD58-204ENST00000464088 CGNL1Q0VF96 1302 aa28.61■■■□□ 2.17
CD58-204ENST00000464088 CSB-PGBD3P0DP91 1061 aa28.6■■■□□ 2.17
CD58-204ENST00000464088 PER1O15534 1290 aaPredicted RBP28.59■■■□□ 2.17
CD58-204ENST00000464088 COG3Q96JB2 828 aa28.59■■■□□ 2.17
CD58-204ENST00000464088 ANKRD26Q9UPS8 1709 aa28.59■■■□□ 2.17
CD58-204ENST00000464088 C1QTNF8P60827 252 aa28.57■■■□□ 2.16
CD58-204ENST00000464088 ARXQ96QS3 562 aa28.57■■■□□ 2.16
CD58-204ENST00000464088 SENP3-EIF4A1A0A087X0R7 540 aa28.54■■■□□ 2.16
CD58-204ENST00000464088 SOX12O15370 315 aa28.54■■■□□ 2.16
CD58-204ENST00000464088 KNSTRNQ9Y448 316 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms