RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 CARD10Q9BWT7 1032 aa18.66■□□□□ 0.58
COMMD3-205ENST00000463688 A0A1W2PP64 1363 aa18.65■□□□□ 0.58
COMMD3-205ENST00000463688 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
COMMD3-205ENST00000463688 ABCC6O95255 1503 aa18.65■□□□□ 0.58
COMMD3-205ENST00000463688 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
COMMD3-205ENST00000463688 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
COMMD3-205ENST00000463688 SOX12O15370 315 aa18.64■□□□□ 0.57
COMMD3-205ENST00000463688 NME9Q86XW9 330 aa18.64■□□□□ 0.57
COMMD3-205ENST00000463688 CCDC7Q96M83 1385 aa18.63■□□□□ 0.57
COMMD3-205ENST00000463688 DDB1Q16531 1140 aa18.62■□□□□ 0.57
COMMD3-205ENST00000463688 CD163L1Q9NR16 1453 aa18.61■□□□□ 0.57
COMMD3-205ENST00000463688 AKAP12Q02952 1782 aa18.61■□□□□ 0.57
COMMD3-205ENST00000463688 PIK3C2AO00443 1686 aa18.59■□□□□ 0.57
COMMD3-205ENST00000463688 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
COMMD3-205ENST00000463688 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
COMMD3-205ENST00000463688 EXOC5O00471 708 aa18.58■□□□□ 0.57
COMMD3-205ENST00000463688 IP6K1Q92551 441 aa18.58■□□□□ 0.57
COMMD3-205ENST00000463688 AXIN2Q9Y2T1 843 aa18.58■□□□□ 0.57
COMMD3-205ENST00000463688 MON2Q7Z3U7 1717 aa18.58■□□□□ 0.56
COMMD3-205ENST00000463688 AMPHP49418 695 aa18.57■□□□□ 0.56
COMMD3-205ENST00000463688 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
COMMD3-205ENST00000463688 EP400Q96L91 3159 aa18.57■□□□□ 0.56
COMMD3-205ENST00000463688 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
COMMD3-205ENST00000463688 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
COMMD3-205ENST00000463688 ERBB3P21860 1342 aa18.55■□□□□ 0.56
COMMD3-205ENST00000463688 THSD7AQ9UPZ6 1657 aa18.55■□□□□ 0.56
COMMD3-205ENST00000463688 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
COMMD3-205ENST00000463688 NFAT5O94916 1531 aa18.54■□□□□ 0.56
COMMD3-205ENST00000463688 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
COMMD3-205ENST00000463688 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
COMMD3-205ENST00000463688 DISP2A7MBM2 1401 aa18.54■□□□□ 0.56
COMMD3-205ENST00000463688 ANKRD24Q8TF21 1146 aa18.54■□□□□ 0.56
COMMD3-205ENST00000463688 FYB1O15117 783 aa18.53■□□□□ 0.56
COMMD3-205ENST00000463688 APBA3O96018 575 aa18.53■□□□□ 0.56
COMMD3-205ENST00000463688 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
COMMD3-205ENST00000463688 TRIM37O94972 964 aa18.52■□□□□ 0.56
COMMD3-205ENST00000463688 IL2RBP14784 551 aa18.52■□□□□ 0.56
COMMD3-205ENST00000463688 DEFB132Q7Z7B7 95 aa18.52■□□□□ 0.56
COMMD3-205ENST00000463688 NBPF14Q5TI25 921 aa18.51■□□□□ 0.55
COMMD3-205ENST00000463688 BCL9O00512 1426 aa18.51■□□□□ 0.55
COMMD3-205ENST00000463688 SMG6Q86US8 1419 aaKnown RBP18.51■□□□□ 0.55
COMMD3-205ENST00000463688 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
COMMD3-205ENST00000463688 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
COMMD3-205ENST00000463688 BCL11BQ9C0K0 894 aaPredicted RBP18.49■□□□□ 0.55
COMMD3-205ENST00000463688 BRWD3Q6RI45 1802 aa18.49■□□□□ 0.55
COMMD3-205ENST00000463688 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
COMMD3-205ENST00000463688 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
COMMD3-205ENST00000463688 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
COMMD3-205ENST00000463688 MAP3K19Q56UN5 1328 aa18.49■□□□□ 0.55
COMMD3-205ENST00000463688 HOXC9P31274 260 aa18.48■□□□□ 0.55
COMMD3-205ENST00000463688 EN1Q05925 392 aaPredicted RBP18.48■□□□□ 0.55
COMMD3-205ENST00000463688 FAM182BQ5T319 152 aa18.48■□□□□ 0.55
COMMD3-205ENST00000463688 PLSCR1O15162 318 aa18.47■□□□□ 0.55
COMMD3-205ENST00000463688 COL18A1P39060 1754 aa18.46■□□□□ 0.55
COMMD3-205ENST00000463688 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
COMMD3-205ENST00000463688 RGPD1P0DJD0 1748 aa18.45■□□□□ 0.54
COMMD3-205ENST00000463688 PARP4Q9UKK3 1724 aaKnown RBP18.44■□□□□ 0.54
COMMD3-205ENST00000463688 CAMKK2Q96RR4 588 aa18.44■□□□□ 0.54
COMMD3-205ENST00000463688 NSD2O96028 1365 aa18.44■□□□□ 0.54
COMMD3-205ENST00000463688 FLT4P35916 1363 aa18.44■□□□□ 0.54
COMMD3-205ENST00000463688 RAPGEF4Q8WZA2 1011 aa18.43■□□□□ 0.54
COMMD3-205ENST00000463688 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
COMMD3-205ENST00000463688 CARD14Q9BXL6 1004 aa18.43■□□□□ 0.54
COMMD3-205ENST00000463688 MARCH10Q8NA82 808 aaPredicted RBP18.42■□□□□ 0.54
COMMD3-205ENST00000463688 KNSTRNQ9Y448 316 aa18.42■□□□□ 0.54
COMMD3-205ENST00000463688 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
COMMD3-205ENST00000463688 INSRP06213 1382 aa18.42■□□□□ 0.54
COMMD3-205ENST00000463688 EZH2Q15910 746 aaKnown RBP18.4■□□□□ 0.54
COMMD3-205ENST00000463688 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
COMMD3-205ENST00000463688 TATP17735 454 aaPredicted RBP18.39■□□□□ 0.53
COMMD3-205ENST00000463688 PANK3Q9H999 370 aa18.39■□□□□ 0.53
COMMD3-205ENST00000463688 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
COMMD3-205ENST00000463688 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
COMMD3-205ENST00000463688 PPM1GO15355 546 aaPredicted RBP18.36■□□□□ 0.53
COMMD3-205ENST00000463688 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
COMMD3-205ENST00000463688 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
COMMD3-205ENST00000463688 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
COMMD3-205ENST00000463688 MORC1Q86VD1 984 aa18.34■□□□□ 0.53
COMMD3-205ENST00000463688 LTN1O94822 1766 aa18.34■□□□□ 0.53
COMMD3-205ENST00000463688 PLEKHG2Q9H7P9 1386 aa18.34■□□□□ 0.53
COMMD3-205ENST00000463688 MSH5O43196 834 aa18.33■□□□□ 0.53
COMMD3-205ENST00000463688 LRRC37A3O60309 1634 aa18.33■□□□□ 0.52
COMMD3-205ENST00000463688 R3HDM1Q15032 1099 aaKnown RBP18.32■□□□□ 0.52
COMMD3-205ENST00000463688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
COMMD3-205ENST00000463688 NBPF6Q5VWK0 638 aa18.32■□□□□ 0.52
COMMD3-205ENST00000463688 NBPF4Q96M43 638 aa18.32■□□□□ 0.52
COMMD3-205ENST00000463688 SPG7Q9UQ90 795 aa18.32■□□□□ 0.52
COMMD3-205ENST00000463688 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
COMMD3-205ENST00000463688 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
COMMD3-205ENST00000463688 FBLN1P23142 703 aa18.31■□□□□ 0.52
COMMD3-205ENST00000463688 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
COMMD3-205ENST00000463688 STK32BQ9NY57 414 aa18.31■□□□□ 0.52
COMMD3-205ENST00000463688 POLKQ9UBT6 870 aa18.31■□□□□ 0.52
COMMD3-205ENST00000463688 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
COMMD3-205ENST00000463688 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
COMMD3-205ENST00000463688 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
COMMD3-205ENST00000463688 TNS1Q9HBL0 1735 aaKnown RBP18.28■□□□□ 0.52
COMMD3-205ENST00000463688 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
COMMD3-205ENST00000463688 PEAK1Q9H792 1746 aa18.27■□□□□ 0.52
COMMD3-205ENST00000463688 KIF20BQ96Q89 1820 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms