RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 WDR17Q8IZU2 1322 aa16.13■□□□□ 0.17
PTPN7-204ENST00000462815 PTF1AQ7RTS3 328 aa16.12■□□□□ 0.17
PTPN7-204ENST00000462815 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
PTPN7-204ENST00000462815 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
PTPN7-204ENST00000462815 ABCC6O95255 1503 aa16.12■□□□□ 0.17
PTPN7-204ENST00000462815 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
PTPN7-204ENST00000462815 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
PTPN7-204ENST00000462815 CD163L1Q9NR16 1453 aa16.11■□□□□ 0.17
PTPN7-204ENST00000462815 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-204ENST00000462815 PLSCR1O15162 318 aa16.09■□□□□ 0.17
PTPN7-204ENST00000462815 MARCH10Q8NA82 808 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-204ENST00000462815 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-204ENST00000462815 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
PTPN7-204ENST00000462815 SBNO2Q9Y2G9 1366 aa16.09■□□□□ 0.17
PTPN7-204ENST00000462815 DDB1Q16531 1140 aa16.08■□□□□ 0.16
PTPN7-204ENST00000462815 PROM2Q8N271 834 aa16.08■□□□□ 0.16
PTPN7-204ENST00000462815 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
PTPN7-204ENST00000462815 ZBTB7CA1YPR0 619 aa16.07■□□□□ 0.16
PTPN7-204ENST00000462815 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
PTPN7-204ENST00000462815 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
PTPN7-204ENST00000462815 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-204ENST00000462815 USP31Q70CQ4 1352 aa16.06■□□□□ 0.16
PTPN7-204ENST00000462815 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
PTPN7-204ENST00000462815 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-204ENST00000462815 UTRNP46939 3433 aa16.06■□□□□ 0.16
PTPN7-204ENST00000462815 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
PTPN7-204ENST00000462815 KCNH5Q8NCM2 988 aa16.05■□□□□ 0.16
PTPN7-204ENST00000462815 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
PTPN7-204ENST00000462815 CDCA7Q9BWT1 371 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-204ENST00000462815 NHSQ6T4R5 1651 aa16.04■□□□□ 0.16
PTPN7-204ENST00000462815 KCNQ2O43526 872 aa16.03■□□□□ 0.16
PTPN7-204ENST00000462815 PDGFDQ9GZP0 370 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-204ENST00000462815 PAPPAQ13219 1627 aa16.03■□□□□ 0.16
PTPN7-204ENST00000462815 NINLQ9Y2I6 1382 aa16.02■□□□□ 0.16
PTPN7-204ENST00000462815 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
PTPN7-204ENST00000462815 LTN1O94822 1766 aa16.02■□□□□ 0.15
PTPN7-204ENST00000462815 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
PTPN7-204ENST00000462815 MYOM1P52179 1685 aa16.01■□□□□ 0.15
PTPN7-204ENST00000462815 ERBB3P21860 1342 aa16■□□□□ 0.15
PTPN7-204ENST00000462815 SOX12O15370 315 aa16■□□□□ 0.15
PTPN7-204ENST00000462815 NEUROD1Q13562 356 aa16■□□□□ 0.15
PTPN7-204ENST00000462815 PTGER2P43116 358 aa15.98■□□□□ 0.15
PTPN7-204ENST00000462815 NME9Q86XW9 330 aa15.98■□□□□ 0.15
PTPN7-204ENST00000462815 EDC4Q6P2E9 1401 aaKnown RBP15.97■□□□□ 0.15
PTPN7-204ENST00000462815 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
PTPN7-204ENST00000462815 EXOC5O00471 708 aa15.96■□□□□ 0.15
PTPN7-204ENST00000462815 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
PTPN7-204ENST00000462815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTPN7-204ENST00000462815 A0A1W2PP64 1363 aa15.96■□□□□ 0.15
PTPN7-204ENST00000462815 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
PTPN7-204ENST00000462815 BTAF1O14981 1849 aa15.95■□□□□ 0.14
PTPN7-204ENST00000462815 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
PTPN7-204ENST00000462815 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-204ENST00000462815 FAM208AQ9UK61 1670 aaKnown RBP15.93■□□□□ 0.14
PTPN7-204ENST00000462815 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
PTPN7-204ENST00000462815 SLC15A2Q16348 729 aa15.93■□□□□ 0.14
PTPN7-204ENST00000462815 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
PTPN7-204ENST00000462815 YY1P25490 414 aa15.92■□□□□ 0.14
PTPN7-204ENST00000462815 PUS7Q96PZ0 661 aaKnown RBP15.92■□□□□ 0.14
PTPN7-204ENST00000462815 GOLGB1Q14789 3259 aaKnown RBP15.92■□□□□ 0.14
PTPN7-204ENST00000462815 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
PTPN7-204ENST00000462815 IL2RBP14784 551 aa15.91■□□□□ 0.14
PTPN7-204ENST00000462815 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
PTPN7-204ENST00000462815 TESK2Q96S53 571 aa15.91■□□□□ 0.14
PTPN7-204ENST00000462815 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
PTPN7-204ENST00000462815 NLRP2Q9NX02 1062 aa15.9■□□□□ 0.14
PTPN7-204ENST00000462815 STK32BQ9NY57 414 aa15.9■□□□□ 0.14
PTPN7-204ENST00000462815 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
PTPN7-204ENST00000462815 QSER1Q2KHR3 1735 aa15.89■□□□□ 0.13
PTPN7-204ENST00000462815 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
PTPN7-204ENST00000462815 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
PTPN7-204ENST00000462815 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-204ENST00000462815 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
PTPN7-204ENST00000462815 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
PTPN7-204ENST00000462815 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-204ENST00000462815 IP6K1Q92551 441 aa15.87■□□□□ 0.13
PTPN7-204ENST00000462815 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
PTPN7-204ENST00000462815 NSD2O96028 1365 aa15.87■□□□□ 0.13
PTPN7-204ENST00000462815 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
PTPN7-204ENST00000462815 TUBGCP6Q96RT7 1819 aa15.86■□□□□ 0.13
PTPN7-204ENST00000462815 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
PTPN7-204ENST00000462815 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
PTPN7-204ENST00000462815 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
PTPN7-204ENST00000462815 SYT17Q9BSW7 474 aa15.85■□□□□ 0.13
PTPN7-204ENST00000462815 FHDC1Q9C0D6 1143 aaPredicted RBP15.85■□□□□ 0.13
PTPN7-204ENST00000462815 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
PTPN7-204ENST00000462815 LY75O60449 1722 aa15.85■□□□□ 0.13
PTPN7-204ENST00000462815 MEGF6O75095 1541 aa15.84■□□□□ 0.13
PTPN7-204ENST00000462815 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
PTPN7-204ENST00000462815 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
PTPN7-204ENST00000462815 ST20-MTHFSA0A0A6YYL1 179 aa15.82■□□□□ 0.12
PTPN7-204ENST00000462815 FBLN1P23142 703 aa15.82■□□□□ 0.12
PTPN7-204ENST00000462815 HOXC9P31274 260 aa15.82■□□□□ 0.12
PTPN7-204ENST00000462815 ANKRD36BQ8N2N9 1353 aa15.82■□□□□ 0.12
PTPN7-204ENST00000462815 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
PTPN7-204ENST00000462815 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
PTPN7-204ENST00000462815 PNPLA7Q6ZV29 1317 aa15.79■□□□□ 0.12
PTPN7-204ENST00000462815 ARXQ96QS3 562 aa15.79■□□□□ 0.12
PTPN7-204ENST00000462815 SLC27A3Q5K4L6 730 aa15.78■□□□□ 0.12
PTPN7-204ENST00000462815 LTV1Q96GA3 475 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms