RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 EMILIN1Q9Y6C2 1016 aa10.23□□□□□ -0.77
THUMPD3-207ENST00000461636 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
THUMPD3-207ENST00000461636 MAN1A2O60476 641 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 BMP2P12643 396 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 VEGFBP49765 207 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 PDXDC2PQ6P474 469 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 ARHGAP9Q9BRR9 750 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 FAM117AQ9C073 453 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 FKBPLQ9UIM3 349 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
THUMPD3-207ENST00000461636 PPP2R2DQ66LE6 453 aa10.21□□□□□ -0.77
THUMPD3-207ENST00000461636 LRRN4Q8WUT4 740 aa10.21□□□□□ -0.77
THUMPD3-207ENST00000461636 SLC10A4Q96EP9 437 aa10.21□□□□□ -0.77
THUMPD3-207ENST00000461636 CDV3Q9UKY7 258 aaKnown RBP10.21□□□□□ -0.77
THUMPD3-207ENST00000461636 PNMA1Q8ND90 353 aa10.2□□□□□ -0.78
THUMPD3-207ENST00000461636 CECR2Q9BXF3 1484 aa10.19□□□□□ -0.78
THUMPD3-207ENST00000461636 FAM181BA6NEQ2 426 aa10.19□□□□□ -0.78
THUMPD3-207ENST00000461636 GMPRP36959 345 aa10.19□□□□□ -0.78
THUMPD3-207ENST00000461636 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
THUMPD3-207ENST00000461636 TSEN34Q9BSV6 310 aaKnown RBP10.19□□□□□ -0.78
THUMPD3-207ENST00000461636 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
THUMPD3-207ENST00000461636 AP1G2O75843 785 aa10.18□□□□□ -0.78
THUMPD3-207ENST00000461636 ZBTB33Q86T24 672 aa10.18□□□□□ -0.78
THUMPD3-207ENST00000461636 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
THUMPD3-207ENST00000461636 PTK2Q05397 1052 aa10.17□□□□□ -0.78
THUMPD3-207ENST00000461636 NR6A1Q15406 480 aa10.17□□□□□ -0.78
THUMPD3-207ENST00000461636 SMARCA4P51532 1647 aa10.17□□□□□ -0.78
THUMPD3-207ENST00000461636 DHX9Q08211 1270 aaKnown RBP10.16□□□□□ -0.78
THUMPD3-207ENST00000461636 GPSM3Q9Y4H4 160 aa10.16□□□□□ -0.78
THUMPD3-207ENST00000461636 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
THUMPD3-207ENST00000461636 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
THUMPD3-207ENST00000461636 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
THUMPD3-207ENST00000461636 FBXO31Q5XUX0 539 aaPredicted RBP10.14□□□□□ -0.79
THUMPD3-207ENST00000461636 KCTD15Q96SI1 283 aaPredicted RBP10.14□□□□□ -0.79
THUMPD3-207ENST00000461636 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
THUMPD3-207ENST00000461636 SOS2Q07890 1332 aaPredicted RBP10.13□□□□□ -0.79
THUMPD3-207ENST00000461636 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
THUMPD3-207ENST00000461636 ZSCAN1Q8NBB4 408 aa10.13□□□□□ -0.79
THUMPD3-207ENST00000461636 VSIG8P0DPA2 414 aa10.12□□□□□ -0.79
THUMPD3-207ENST00000461636 NBPF20Q3BBV1 942 aa10.12□□□□□ -0.79
THUMPD3-207ENST00000461636 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
THUMPD3-207ENST00000461636 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
THUMPD3-207ENST00000461636 DNMT3LQ9UJW3 386 aa10.11□□□□□ -0.79
THUMPD3-207ENST00000461636 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
THUMPD3-207ENST00000461636 TTLL8A6PVC2 850 aa10.1□□□□□ -0.79
THUMPD3-207ENST00000461636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.1□□□□□ -0.79
THUMPD3-207ENST00000461636 Q6ZVU0 165 aa10.1□□□□□ -0.79
THUMPD3-207ENST00000461636 RFC5P40937 340 aa10.09□□□□□ -0.79
THUMPD3-207ENST00000461636 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
THUMPD3-207ENST00000461636 PCMTD1Q96MG8 357 aaPredicted RBP10.09□□□□□ -0.79
THUMPD3-207ENST00000461636 GOPCQ9HD26 462 aa10.09□□□□□ -0.79
THUMPD3-207ENST00000461636 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
THUMPD3-207ENST00000461636 CBLBQ13191 982 aa10.08□□□□□ -0.8
THUMPD3-207ENST00000461636 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
THUMPD3-207ENST00000461636 ATAD2BQ9ULI0 1458 aa10.08□□□□□ -0.8
THUMPD3-207ENST00000461636 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
THUMPD3-207ENST00000461636 SPINT1O43278 529 aa10.07□□□□□ -0.8
THUMPD3-207ENST00000461636 OCSTAMPQ9BR26 566 aa10.07□□□□□ -0.8
THUMPD3-207ENST00000461636 SMARCA2P51531 1590 aa10.06□□□□□ -0.8
THUMPD3-207ENST00000461636 DZIP3Q86Y13 1208 aaKnown RBP10.06□□□□□ -0.8
THUMPD3-207ENST00000461636 EPS8L1Q8TE68 723 aa10.06□□□□□ -0.8
THUMPD3-207ENST00000461636 TMEM259Q4ZIN3 620 aa10.05□□□□□ -0.8
THUMPD3-207ENST00000461636 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
THUMPD3-207ENST00000461636 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
THUMPD3-207ENST00000461636 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
THUMPD3-207ENST00000461636 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
THUMPD3-207ENST00000461636 RAB15P59190 212 aa10.02□□□□□ -0.81
THUMPD3-207ENST00000461636 RELBQ01201 579 aa10.02□□□□□ -0.81
THUMPD3-207ENST00000461636 PTSQ03393 145 aa10.02□□□□□ -0.81
THUMPD3-207ENST00000461636 FIGNL2A6NMB9 653 aa10.01□□□□□ -0.81
THUMPD3-207ENST00000461636 RSF1Q96T23 1441 aaPredicted RBP10□□□□□ -0.81
THUMPD3-207ENST00000461636 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
THUMPD3-207ENST00000461636 ZNF784Q8NCA9 323 aaPredicted RBP10□□□□□ -0.81
THUMPD3-207ENST00000461636 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
THUMPD3-207ENST00000461636 POLMQ9NP87 494 aaPredicted RBP10□□□□□ -0.81
THUMPD3-207ENST00000461636 ADH1AP07327 375 aa9.99□□□□□ -0.81
THUMPD3-207ENST00000461636 INSM2Q96T92 566 aaPredicted RBP9.99□□□□□ -0.81
THUMPD3-207ENST00000461636 TRIM34Q9BYJ4 488 aa9.99□□□□□ -0.81
THUMPD3-207ENST00000461636 TMPRSS4Q9NRS4 437 aa9.99□□□□□ -0.81
THUMPD3-207ENST00000461636 WIZO95785 1651 aa9.99□□□□□ -0.81
THUMPD3-207ENST00000461636 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
THUMPD3-207ENST00000461636 ESPNB1AK53 854 aa9.97□□□□□ -0.81
THUMPD3-207ENST00000461636 CTSOP43234 321 aaPredicted RBP9.97□□□□□ -0.81
THUMPD3-207ENST00000461636 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
THUMPD3-207ENST00000461636 IL27Q8NEV9 243 aa9.97□□□□□ -0.81
THUMPD3-207ENST00000461636 ZBBXA8MT70 800 aa9.96□□□□□ -0.82
THUMPD3-207ENST00000461636 BAZ1BQ9UIG0 1483 aaKnown RBP9.96□□□□□ -0.82
THUMPD3-207ENST00000461636 RNF217Q8TC41 542 aa9.95□□□□□ -0.82
THUMPD3-207ENST00000461636 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
THUMPD3-207ENST00000461636 SLC35F4A4IF30 521 aa9.94□□□□□ -0.82
THUMPD3-207ENST00000461636 LILRA1O75019 489 aa9.94□□□□□ -0.82
THUMPD3-207ENST00000461636 NANOS1Q8WY41 292 aaKnown RBP9.94□□□□□ -0.82
THUMPD3-207ENST00000461636 ZNF592Q92610 1267 aa9.94□□□□□ -0.82
THUMPD3-207ENST00000461636 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
THUMPD3-207ENST00000461636 ITGA6P23229 1130 aa9.93□□□□□ -0.82
THUMPD3-207ENST00000461636 PTGIRP43119 386 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms