RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
NECTIN3-202ENST00000461477 PARP4Q9UKK3 1724 aaKnown RBP13.83□□□□□ -0.2
NECTIN3-202ENST00000461477 PTF1AQ7RTS3 328 aa13.82□□□□□ -0.2
NECTIN3-202ENST00000461477 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
NECTIN3-202ENST00000461477 PDGFDQ9GZP0 370 aaPredicted RBP13.82□□□□□ -0.2
NECTIN3-202ENST00000461477 BARGINQ6ZT62 677 aa13.81□□□□□ -0.2
NECTIN3-202ENST00000461477 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
NECTIN3-202ENST00000461477 MYOM1P52179 1685 aa13.8□□□□□ -0.2
NECTIN3-202ENST00000461477 C19orf67A6NJJ6 358 aa13.8□□□□□ -0.2
NECTIN3-202ENST00000461477 LRRC37A3O60309 1634 aa13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 RGPD3A6NKT7 1758 aaPredicted RBP13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 RGPD4Q7Z3J3 1758 aa13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 KCNQ2O43526 872 aa13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 FKBP8Q14318 412 aa13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
NECTIN3-202ENST00000461477 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
NECTIN3-202ENST00000461477 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
NECTIN3-202ENST00000461477 EVX2Q03828 476 aa13.77□□□□□ -0.21
NECTIN3-202ENST00000461477 PDE3BQ13370 1112 aa13.77□□□□□ -0.21
NECTIN3-202ENST00000461477 WNK3Q9BYP7 1800 aa13.77□□□□□ -0.21
NECTIN3-202ENST00000461477 SPON1Q9HCB6 807 aa13.77□□□□□ -0.21
NECTIN3-202ENST00000461477 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
NECTIN3-202ENST00000461477 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 USP19O94966 1318 aa13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 ACEP12821 1306 aa13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 NBPF8Q3BBV2 869 aa13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 KDM2AQ9Y2K7 1162 aa13.76□□□□□ -0.21
NECTIN3-202ENST00000461477 CPDO75976 1380 aa13.75□□□□□ -0.21
NECTIN3-202ENST00000461477 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
NECTIN3-202ENST00000461477 COL18A1P39060 1754 aa13.75□□□□□ -0.21
NECTIN3-202ENST00000461477 EVA1CP58658 441 aa13.74□□□□□ -0.21
NECTIN3-202ENST00000461477 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
NECTIN3-202ENST00000461477 PTGER2P43116 358 aa13.73□□□□□ -0.21
NECTIN3-202ENST00000461477 DCAF11Q8TEB1 546 aa13.73□□□□□ -0.21
NECTIN3-202ENST00000461477 ZBTB7AO95365 584 aa13.72□□□□□ -0.21
NECTIN3-202ENST00000461477 ZNF784Q8NCA9 323 aaPredicted RBP13.72□□□□□ -0.21
NECTIN3-202ENST00000461477 RGPD5Q99666 1765 aa13.72□□□□□ -0.21
NECTIN3-202ENST00000461477 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
NECTIN3-202ENST00000461477 OVOS2A0A0G2JMS6 1433 aa13.71□□□□□ -0.22
NECTIN3-202ENST00000461477 OVOS2A0A0J9YW53 1432 aa13.71□□□□□ -0.22
NECTIN3-202ENST00000461477 OVOS2Q6IE36 1432 aa13.71□□□□□ -0.22
NECTIN3-202ENST00000461477 AKAP12Q02952 1782 aa13.71□□□□□ -0.22
NECTIN3-202ENST00000461477 GCP02774 474 aa13.7□□□□□ -0.22
NECTIN3-202ENST00000461477 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
NECTIN3-202ENST00000461477 THRAP3Q9Y2W1 955 aaKnown RBP13.7□□□□□ -0.22
NECTIN3-202ENST00000461477 CRB1P82279 1406 aa13.7□□□□□ -0.22
NECTIN3-202ENST00000461477 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
NECTIN3-202ENST00000461477 PLSCR1O15162 318 aa13.69□□□□□ -0.22
NECTIN3-202ENST00000461477 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
NECTIN3-202ENST00000461477 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
NECTIN3-202ENST00000461477 SLIT3O75094 1523 aa13.69□□□□□ -0.22
NECTIN3-202ENST00000461477 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
NECTIN3-202ENST00000461477 CHD4Q14839 1912 aa13.68□□□□□ -0.22
NECTIN3-202ENST00000461477 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
NECTIN3-202ENST00000461477 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
NECTIN3-202ENST00000461477 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
NECTIN3-202ENST00000461477 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
NECTIN3-202ENST00000461477 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
NECTIN3-202ENST00000461477 BCL11BQ9C0K0 894 aaPredicted RBP13.66□□□□□ -0.22
NECTIN3-202ENST00000461477 PAPPAQ13219 1627 aa13.65□□□□□ -0.22
NECTIN3-202ENST00000461477 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
NECTIN3-202ENST00000461477 AATKQ6ZMQ8 1374 aa13.65□□□□□ -0.22
NECTIN3-202ENST00000461477 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
NECTIN3-202ENST00000461477 DDB1Q16531 1140 aa13.64□□□□□ -0.23
NECTIN3-202ENST00000461477 NBPF1Q3BBV0 1214 aa13.64□□□□□ -0.23
NECTIN3-202ENST00000461477 SYT17Q9BSW7 474 aa13.64□□□□□ -0.23
NECTIN3-202ENST00000461477 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
NECTIN3-202ENST00000461477 BCL9O00512 1426 aa13.64□□□□□ -0.23
NECTIN3-202ENST00000461477 TXNRD1Q16881 649 aa13.63□□□□□ -0.23
NECTIN3-202ENST00000461477 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
NECTIN3-202ENST00000461477 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
NECTIN3-202ENST00000461477 USP6P35125 1406 aa13.62□□□□□ -0.23
NECTIN3-202ENST00000461477 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
NECTIN3-202ENST00000461477 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
NECTIN3-202ENST00000461477 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
NECTIN3-202ENST00000461477 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
NECTIN3-202ENST00000461477 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
NECTIN3-202ENST00000461477 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
NECTIN3-202ENST00000461477 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
NECTIN3-202ENST00000461477 NLRP6P59044 892 aa13.59□□□□□ -0.23
NECTIN3-202ENST00000461477 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
NECTIN3-202ENST00000461477 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
NECTIN3-202ENST00000461477 BTAF1O14981 1849 aa13.59□□□□□ -0.23
NECTIN3-202ENST00000461477 NFAT5O94916 1531 aa13.59□□□□□ -0.23
NECTIN3-202ENST00000461477 TUBGCP6Q96RT7 1819 aa13.58□□□□□ -0.24
NECTIN3-202ENST00000461477 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.24
NECTIN3-202ENST00000461477 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
NECTIN3-202ENST00000461477 STK32BQ9NY57 414 aa13.58□□□□□ -0.24
NECTIN3-202ENST00000461477 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
NECTIN3-202ENST00000461477 SHANK3Q9BYB0 1731 aa13.57□□□□□ -0.24
NECTIN3-202ENST00000461477 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
NECTIN3-202ENST00000461477 ARHGEF25Q86VW2 580 aa13.57□□□□□ -0.24
NECTIN3-202ENST00000461477 MIER1Q8N108 512 aa13.57□□□□□ -0.24
NECTIN3-202ENST00000461477 MTFR1LQ9H019 292 aa13.57□□□□□ -0.24
NECTIN3-202ENST00000461477 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
NECTIN3-202ENST00000461477 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
NECTIN3-202ENST00000461477 SOX12O15370 315 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms