RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 NFKBIBQ15653 356 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 ABTB2Q8N961 1025 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
COPS7B-217ENST00000461350 FOXO3O43524 673 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 PRKAR2BP31323 418 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 GSE1Q14687 1217 aa14.42□□□□□ -0.1
COPS7B-217ENST00000461350 PSME1Q06323 249 aa14.41□□□□□ -0.1
COPS7B-217ENST00000461350 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
COPS7B-217ENST00000461350 CENPQQ7L2Z9 268 aaPredicted RBP14.41□□□□□ -0.1
COPS7B-217ENST00000461350 TMEM94Q12767 1356 aa14.41□□□□□ -0.1
COPS7B-217ENST00000461350 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
COPS7B-217ENST00000461350 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
COPS7B-217ENST00000461350 RGS3P49796 1198 aa14.4□□□□□ -0.1
COPS7B-217ENST00000461350 BRPF3Q9ULD4 1205 aa14.4□□□□□ -0.1
COPS7B-217ENST00000461350 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
COPS7B-217ENST00000461350 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 USP31Q70CQ4 1352 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 E9PSI1 815 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 TRMT2AQ8IZ69 625 aaKnown RBP14.39□□□□□ -0.11
COPS7B-217ENST00000461350 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 C19orf44Q9H6X5 657 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-217ENST00000461350 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
COPS7B-217ENST00000461350 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 NGEFQ8N5V2 710 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 KDM2BQ8NHM5 1336 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 FCHSD2O94868 740 aa14.39□□□□□ -0.11
COPS7B-217ENST00000461350 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-217ENST00000461350 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
COPS7B-217ENST00000461350 PEAK1Q9H792 1746 aa14.38□□□□□ -0.11
COPS7B-217ENST00000461350 STRCQ7RTU9 1775 aa14.37□□□□□ -0.11
COPS7B-217ENST00000461350 RIPK4P57078 832 aa14.37□□□□□ -0.11
COPS7B-217ENST00000461350 LMOD2Q6P5Q4 547 aa14.37□□□□□ -0.11
COPS7B-217ENST00000461350 AEBP1Q8IUX7 1158 aa14.37□□□□□ -0.11
COPS7B-217ENST00000461350 TRIM35Q9UPQ4 493 aa14.37□□□□□ -0.11
COPS7B-217ENST00000461350 ATF3P18847 181 aa14.37□□□□□ -0.11
COPS7B-217ENST00000461350 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.37□□□□□ -0.11
COPS7B-217ENST00000461350 AMPHP49418 695 aa14.36□□□□□ -0.11
COPS7B-217ENST00000461350 DDX17Q92841 729 aaKnown RBP14.36□□□□□ -0.11
COPS7B-217ENST00000461350 FRAT1Q92837 279 aaPredicted RBP14.36□□□□□ -0.11
COPS7B-217ENST00000461350 MARF1Q9Y4F3 1742 aaKnown RBP14.35□□□□□ -0.11
COPS7B-217ENST00000461350 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
COPS7B-217ENST00000461350 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
COPS7B-217ENST00000461350 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
COPS7B-217ENST00000461350 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
COPS7B-217ENST00000461350 WDR63Q8IWG1 891 aa14.35□□□□□ -0.11
COPS7B-217ENST00000461350 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
COPS7B-217ENST00000461350 C1orf167Q5SNV9 1468 aa14.35□□□□□ -0.11
COPS7B-217ENST00000461350 ZNF335Q9H4Z2 1342 aaPredicted RBP14.34□□□□□ -0.11
COPS7B-217ENST00000461350 TSR2Q969E8 191 aaKnown RBP14.34□□□□□ -0.11
COPS7B-217ENST00000461350 BCAR3O75815 825 aa14.33□□□□□ -0.12
COPS7B-217ENST00000461350 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
COPS7B-217ENST00000461350 LTV1Q96GA3 475 aaPredicted RBP14.33□□□□□ -0.12
COPS7B-217ENST00000461350 KRT28Q7Z3Y7 464 aa14.32□□□□□ -0.12
COPS7B-217ENST00000461350 SBNO1A3KN83 1393 aa14.32□□□□□ -0.12
COPS7B-217ENST00000461350 FLT4P35916 1363 aa14.32□□□□□ -0.12
COPS7B-217ENST00000461350 NFE2L2Q16236 605 aa14.31□□□□□ -0.12
COPS7B-217ENST00000461350 MST1RQ04912 1400 aa14.31□□□□□ -0.12
COPS7B-217ENST00000461350 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
COPS7B-217ENST00000461350 HOXC9P31274 260 aa14.3□□□□□ -0.12
COPS7B-217ENST00000461350 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
COPS7B-217ENST00000461350 MSH6P52701 1360 aa14.29□□□□□ -0.12
COPS7B-217ENST00000461350 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
COPS7B-217ENST00000461350 BCL2L13Q9BXK5 485 aa14.29□□□□□ -0.12
COPS7B-217ENST00000461350 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
COPS7B-217ENST00000461350 XIRP1Q702N8 1843 aaKnown RBP14.28□□□□□ -0.12
COPS7B-217ENST00000461350 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
COPS7B-217ENST00000461350 EYA1Q99502 592 aa14.28□□□□□ -0.12
COPS7B-217ENST00000461350 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
COPS7B-217ENST00000461350 DLG5Q8TDM6 1919 aa14.27□□□□□ -0.12
COPS7B-217ENST00000461350 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
COPS7B-217ENST00000461350 LTN1O94822 1766 aa14.27□□□□□ -0.13
COPS7B-217ENST00000461350 GCP02774 474 aa14.26□□□□□ -0.13
COPS7B-217ENST00000461350 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
COPS7B-217ENST00000461350 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
COPS7B-217ENST00000461350 RGPD1P0DJD0 1748 aa14.26□□□□□ -0.13
COPS7B-217ENST00000461350 DCCP43146 1447 aa14.25□□□□□ -0.13
COPS7B-217ENST00000461350 NFAT5O94916 1531 aa14.25□□□□□ -0.13
COPS7B-217ENST00000461350 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
COPS7B-217ENST00000461350 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
COPS7B-217ENST00000461350 KIF1AQ12756 1690 aa14.25□□□□□ -0.13
COPS7B-217ENST00000461350 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
COPS7B-217ENST00000461350 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
COPS7B-217ENST00000461350 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
COPS7B-217ENST00000461350 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
COPS7B-217ENST00000461350 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
COPS7B-217ENST00000461350 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
COPS7B-217ENST00000461350 CABLES1Q8TDN4 633 aa14.23□□□□□ -0.13
COPS7B-217ENST00000461350 IP6K1Q92551 441 aa14.23□□□□□ -0.13
COPS7B-217ENST00000461350 MCM10Q7L590 875 aa14.23□□□□□ -0.13
COPS7B-217ENST00000461350 IL16Q14005 1332 aa14.23□□□□□ -0.13
COPS7B-217ENST00000461350 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
COPS7B-217ENST00000461350 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
COPS7B-217ENST00000461350 BRINP3Q76B58 766 aa14.22□□□□□ -0.13
COPS7B-217ENST00000461350 IGHDP01880 384 aa14.22□□□□□ -0.13
COPS7B-217ENST00000461350 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
COPS7B-217ENST00000461350 TNNQ9UQP3 1299 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms