RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 HSPA5P11021 654 aaKnown RBP20.77■□□□□ 0.92
ATG4B-213ENST00000460211 ZBTB7CA1YPR0 619 aa20.76■□□□□ 0.91
ATG4B-213ENST00000460211 PDE3BQ13370 1112 aa20.76■□□□□ 0.91
ATG4B-213ENST00000460211 NRKQ7Z2Y5 1582 aa20.76■□□□□ 0.91
ATG4B-213ENST00000460211 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
ATG4B-213ENST00000460211 LARP1Q6PKG0 1096 aaKnown RBP20.75■□□□□ 0.91
ATG4B-213ENST00000460211 NME9Q86XW9 330 aa20.75■□□□□ 0.91
ATG4B-213ENST00000460211 USP31Q70CQ4 1352 aa20.74■□□□□ 0.91
ATG4B-213ENST00000460211 RREB1Q92766 1687 aa20.74■□□□□ 0.91
ATG4B-213ENST00000460211 CAMTA1Q9Y6Y1 1673 aa20.74■□□□□ 0.91
ATG4B-213ENST00000460211 SOX12O15370 315 aa20.74■□□□□ 0.91
ATG4B-213ENST00000460211 NUP188Q5SRE5 1749 aa20.73■□□□□ 0.91
ATG4B-213ENST00000460211 BARGINQ6ZT62 677 aa20.73■□□□□ 0.91
ATG4B-213ENST00000460211 SLIT3O75094 1523 aa20.73■□□□□ 0.91
ATG4B-213ENST00000460211 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
ATG4B-213ENST00000460211 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
ATG4B-213ENST00000460211 PIK3C2AO00443 1686 aa20.72■□□□□ 0.91
ATG4B-213ENST00000460211 AATKQ6ZMQ8 1374 aa20.72■□□□□ 0.91
ATG4B-213ENST00000460211 LMO7Q8WWI1 1683 aa20.71■□□□□ 0.91
ATG4B-213ENST00000460211 ARHGEF25Q86VW2 580 aa20.71■□□□□ 0.91
ATG4B-213ENST00000460211 TCP11L2Q8N4U5 519 aa20.71■□□□□ 0.91
ATG4B-213ENST00000460211 PARD3Q8TEW0 1356 aa20.71■□□□□ 0.91
ATG4B-213ENST00000460211 COG3Q96JB2 828 aa20.7■□□□□ 0.9
ATG4B-213ENST00000460211 NBPF14Q5TI25 921 aa20.67■□□□□ 0.9
ATG4B-213ENST00000460211 PARP4Q9UKK3 1724 aaKnown RBP20.65■□□□□ 0.9
ATG4B-213ENST00000460211 COL5A2P05997 1499 aaPredicted RBP20.64■□□□□ 0.89
ATG4B-213ENST00000460211 THRAP3Q9Y2W1 955 aaKnown RBP20.64■□□□□ 0.89
ATG4B-213ENST00000460211 FYB1O15117 783 aa20.63■□□□□ 0.89
ATG4B-213ENST00000460211 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
ATG4B-213ENST00000460211 TOM1L2Q6ZVM7 507 aa20.63■□□□□ 0.89
ATG4B-213ENST00000460211 AXIN2Q9Y2T1 843 aa20.63■□□□□ 0.89
ATG4B-213ENST00000460211 OVOS2A0A0J9YW53 1432 aa20.62■□□□□ 0.89
ATG4B-213ENST00000460211 OVOS2Q6IE36 1432 aa20.62■□□□□ 0.89
ATG4B-213ENST00000460211 PPP1R1BQ9UD71 204 aaPredicted RBP20.62■□□□□ 0.89
ATG4B-213ENST00000460211 YY1P25490 414 aa20.61■□□□□ 0.89
ATG4B-213ENST00000460211 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
ATG4B-213ENST00000460211 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
ATG4B-213ENST00000460211 NFAT5O94916 1531 aa20.61■□□□□ 0.89
ATG4B-213ENST00000460211 CRB1P82279 1406 aa20.61■□□□□ 0.89
ATG4B-213ENST00000460211 WDR17Q8IZU2 1322 aa20.6■□□□□ 0.89
ATG4B-213ENST00000460211 SPON1Q9HCB6 807 aa20.6■□□□□ 0.89
ATG4B-213ENST00000460211 LRRC37A3O60309 1634 aa20.59■□□□□ 0.89
ATG4B-213ENST00000460211 NSD3Q9BZ95 1437 aa20.59■□□□□ 0.89
ATG4B-213ENST00000460211 PEAK1Q9H792 1746 aa20.58■□□□□ 0.89
ATG4B-213ENST00000460211 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.89
ATG4B-213ENST00000460211 USP54Q70EL1 1684 aa20.58■□□□□ 0.89
ATG4B-213ENST00000460211 SBF2Q86WG5 1849 aa20.58■□□□□ 0.89
ATG4B-213ENST00000460211 KCNQ2O43526 872 aa20.58■□□□□ 0.89
ATG4B-213ENST00000460211 OVOS2A0A0G2JMS6 1433 aa20.58■□□□□ 0.88
ATG4B-213ENST00000460211 ABCC6O95255 1503 aa20.57■□□□□ 0.88
ATG4B-213ENST00000460211 AMPHP49418 695 aa20.56■□□□□ 0.88
ATG4B-213ENST00000460211 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
ATG4B-213ENST00000460211 IP6K1Q92551 441 aa20.56■□□□□ 0.88
ATG4B-213ENST00000460211 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
ATG4B-213ENST00000460211 PANK3Q9H999 370 aa20.56■□□□□ 0.88
ATG4B-213ENST00000460211 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
ATG4B-213ENST00000460211 DDB1Q16531 1140 aa20.55■□□□□ 0.88
ATG4B-213ENST00000460211 CDCA7Q9BWT1 371 aaPredicted RBP20.55■□□□□ 0.88
ATG4B-213ENST00000460211 COL18A1P39060 1754 aa20.54■□□□□ 0.88
ATG4B-213ENST00000460211 ANO8Q9HCE9 1232 aaPredicted RBP20.54■□□□□ 0.88
ATG4B-213ENST00000460211 MAP3K19Q56UN5 1328 aa20.53■□□□□ 0.88
ATG4B-213ENST00000460211 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
ATG4B-213ENST00000460211 ANKRD24Q8TF21 1146 aa20.53■□□□□ 0.88
ATG4B-213ENST00000460211 NLRP2Q9NX02 1062 aa20.53■□□□□ 0.88
ATG4B-213ENST00000460211 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
ATG4B-213ENST00000460211 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
ATG4B-213ENST00000460211 MYOM1P52179 1685 aa20.52■□□□□ 0.88
ATG4B-213ENST00000460211 CCDC7Q96M83 1385 aa20.52■□□□□ 0.88
ATG4B-213ENST00000460211 ERBB3P21860 1342 aa20.52■□□□□ 0.87
ATG4B-213ENST00000460211 KIF7Q2M1P5 1343 aa20.52■□□□□ 0.87
ATG4B-213ENST00000460211 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
ATG4B-213ENST00000460211 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
ATG4B-213ENST00000460211 PLSCR1O15162 318 aa20.51■□□□□ 0.87
ATG4B-213ENST00000460211 FBLN1P23142 703 aa20.5■□□□□ 0.87
ATG4B-213ENST00000460211 HOXC9P31274 260 aa20.5■□□□□ 0.87
ATG4B-213ENST00000460211 RRS1Q15050 365 aaKnown RBP20.5■□□□□ 0.87
ATG4B-213ENST00000460211 MARCH10Q8NA82 808 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-213ENST00000460211 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-213ENST00000460211 PDGFDQ9GZP0 370 aaPredicted RBP20.5■□□□□ 0.87
ATG4B-213ENST00000460211 CASZ1Q86V15 1759 aa20.49■□□□□ 0.87
ATG4B-213ENST00000460211 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
ATG4B-213ENST00000460211 KNSTRNQ9Y448 316 aa20.49■□□□□ 0.87
ATG4B-213ENST00000460211 RTL1A6NKG5 1358 aa20.47■□□□□ 0.87
ATG4B-213ENST00000460211 ZBTB7AO95365 584 aa20.47■□□□□ 0.87
ATG4B-213ENST00000460211 PROM2Q8N271 834 aa20.47■□□□□ 0.87
ATG4B-213ENST00000460211 LTN1O94822 1766 aa20.46■□□□□ 0.87
ATG4B-213ENST00000460211 EXOC5O00471 708 aa20.46■□□□□ 0.87
ATG4B-213ENST00000460211 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
ATG4B-213ENST00000460211 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
ATG4B-213ENST00000460211 NSD2O96028 1365 aa20.45■□□□□ 0.86
ATG4B-213ENST00000460211 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
ATG4B-213ENST00000460211 PPM1GO15355 546 aaPredicted RBP20.43■□□□□ 0.86
ATG4B-213ENST00000460211 IL2RBP14784 551 aa20.43■□□□□ 0.86
ATG4B-213ENST00000460211 FLT4P35916 1363 aa20.43■□□□□ 0.86
ATG4B-213ENST00000460211 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
ATG4B-213ENST00000460211 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
ATG4B-213ENST00000460211 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
ATG4B-213ENST00000460211 HSP90AB2PQ58FF8 381 aa20.41■□□□□ 0.86
ATG4B-213ENST00000460211 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
ATG4B-213ENST00000460211 STK32BQ9NY57 414 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms