RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ZC3H6P61129 1189 aaKnown RBP20.58■□□□□ 0.89
CMTM3-203ENST00000460097 KCNH5Q8NCM2 988 aa20.58■□□□□ 0.89
CMTM3-203ENST00000460097 COG3Q96JB2 828 aa20.58■□□□□ 0.89
CMTM3-203ENST00000460097 RCAN3Q9UKA8 241 aa20.57■□□□□ 0.88
CMTM3-203ENST00000460097 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
CMTM3-203ENST00000460097 GGNBP2Q9H3C7 697 aa20.57■□□□□ 0.88
CMTM3-203ENST00000460097 KNSTRNQ9Y448 316 aa20.57■□□□□ 0.88
CMTM3-203ENST00000460097 FAM83GA6ND36 823 aa20.56■□□□□ 0.88
CMTM3-203ENST00000460097 ABCA3Q99758 1704 aa20.55■□□□□ 0.88
CMTM3-203ENST00000460097 SOX12O15370 315 aa20.55■□□□□ 0.88
CMTM3-203ENST00000460097 CRYBG1Q9Y4K1 1723 aa20.55■□□□□ 0.88
CMTM3-203ENST00000460097 FNBP4Q8N3X1 1017 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-203ENST00000460097 PRDM11Q9NQV5 511 aa20.54■□□□□ 0.88
CMTM3-203ENST00000460097 PARD3Q8TEW0 1356 aa20.54■□□□□ 0.88
CMTM3-203ENST00000460097 KIAA0232Q92628 1395 aa20.54■□□□□ 0.88
CMTM3-203ENST00000460097 PHRF1Q9P1Y6 1649 aaKnown RBP20.54■□□□□ 0.88
CMTM3-203ENST00000460097 AFF2P51816 1311 aa20.54■□□□□ 0.88
CMTM3-203ENST00000460097 OVOS2A0A0J9YW53 1432 aa20.53■□□□□ 0.88
CMTM3-203ENST00000460097 OVOS2Q6IE36 1432 aa20.53■□□□□ 0.88
CMTM3-203ENST00000460097 SLIT3O75094 1523 aa20.53■□□□□ 0.88
CMTM3-203ENST00000460097 PER1O15534 1290 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-203ENST00000460097 MARF1Q9Y4F3 1742 aaKnown RBP20.52■□□□□ 0.88
CMTM3-203ENST00000460097 CPDO75976 1380 aa20.51■□□□□ 0.87
CMTM3-203ENST00000460097 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-203ENST00000460097 EXOC6Q8TAG9 804 aa20.51■□□□□ 0.87
CMTM3-203ENST00000460097 RGS17Q9UGC6 210 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-203ENST00000460097 NEFMP07197 916 aa20.51■□□□□ 0.87
CMTM3-203ENST00000460097 CHRNA2Q15822 529 aa20.51■□□□□ 0.87
CMTM3-203ENST00000460097 USP21Q9UK80 565 aa20.51■□□□□ 0.87
CMTM3-203ENST00000460097 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
CMTM3-203ENST00000460097 ARHGEF25Q86VW2 580 aa20.49■□□□□ 0.87
CMTM3-203ENST00000460097 USP54Q70EL1 1684 aa20.49■□□□□ 0.87
CMTM3-203ENST00000460097 BTG4Q9NY30 223 aa20.49■□□□□ 0.87
CMTM3-203ENST00000460097 BLMP54132 1417 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-203ENST00000460097 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
CMTM3-203ENST00000460097 SLIT2O94813 1529 aa20.47■□□□□ 0.87
CMTM3-203ENST00000460097 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-203ENST00000460097 UNC5CLQ8IV45 518 aa20.47■□□□□ 0.87
CMTM3-203ENST00000460097 NSD2O96028 1365 aa20.47■□□□□ 0.87
CMTM3-203ENST00000460097 FBLN1P23142 703 aa20.46■□□□□ 0.87
CMTM3-203ENST00000460097 QTRT2Q9H974 415 aaKnown RBP20.46■□□□□ 0.87
CMTM3-203ENST00000460097 NFAT5O94916 1531 aa20.45■□□□□ 0.87
CMTM3-203ENST00000460097 COL14A1Q05707 1796 aaKnown RBP20.45■□□□□ 0.86
CMTM3-203ENST00000460097 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
CMTM3-203ENST00000460097 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
CMTM3-203ENST00000460097 TRPC5Q9UL62 973 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-203ENST00000460097 POTEAQ6S8J7 498 aa20.44■□□□□ 0.86
CMTM3-203ENST00000460097 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
CMTM3-203ENST00000460097 EVA1CP58658 441 aa20.43■□□□□ 0.86
CMTM3-203ENST00000460097 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
CMTM3-203ENST00000460097 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-203ENST00000460097 RRS1Q15050 365 aaKnown RBP20.41■□□□□ 0.86
CMTM3-203ENST00000460097 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
CMTM3-203ENST00000460097 IL27Q8NEV9 243 aa20.41■□□□□ 0.86
CMTM3-203ENST00000460097 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
CMTM3-203ENST00000460097 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
CMTM3-203ENST00000460097 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
CMTM3-203ENST00000460097 AMPHP49418 695 aa20.41■□□□□ 0.86
CMTM3-203ENST00000460097 ANO8Q9HCE9 1232 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-203ENST00000460097 PLCH1Q4KWH8 1693 aa20.41■□□□□ 0.86
CMTM3-203ENST00000460097 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
CMTM3-203ENST00000460097 CAMTA1Q9Y6Y1 1673 aa20.4■□□□□ 0.86
CMTM3-203ENST00000460097 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.86
CMTM3-203ENST00000460097 VPS72Q15906 364 aa20.39■□□□□ 0.86
CMTM3-203ENST00000460097 IP6K1Q92551 441 aa20.39■□□□□ 0.86
CMTM3-203ENST00000460097 RXRBP28702 533 aa20.39■□□□□ 0.85
CMTM3-203ENST00000460097 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
CMTM3-203ENST00000460097 ATRNO75882 1429 aa20.38■□□□□ 0.85
CMTM3-203ENST00000460097 GSE1Q14687 1217 aa20.38■□□□□ 0.85
CMTM3-203ENST00000460097 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
CMTM3-203ENST00000460097 LMO7Q8WWI1 1683 aa20.37■□□□□ 0.85
CMTM3-203ENST00000460097 ANKRD26Q9UPS8 1709 aa20.37■□□□□ 0.85
CMTM3-203ENST00000460097 RBM6P78332 1123 aaKnown RBP20.37■□□□□ 0.85
CMTM3-203ENST00000460097 GJD4Q96KN9 370 aaPredicted RBP20.37■□□□□ 0.85
CMTM3-203ENST00000460097 COL18A1P39060 1754 aa20.37■□□□□ 0.85
CMTM3-203ENST00000460097 HOXC9P31274 260 aa20.36■□□□□ 0.85
CMTM3-203ENST00000460097 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
CMTM3-203ENST00000460097 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.36■□□□□ 0.85
CMTM3-203ENST00000460097 LTN1O94822 1766 aa20.36■□□□□ 0.85
CMTM3-203ENST00000460097 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
CMTM3-203ENST00000460097 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
CMTM3-203ENST00000460097 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
CMTM3-203ENST00000460097 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
CMTM3-203ENST00000460097 EMILIN1Q9Y6C2 1016 aa20.35■□□□□ 0.85
CMTM3-203ENST00000460097 COL5A2P05997 1499 aaPredicted RBP20.35■□□□□ 0.85
CMTM3-203ENST00000460097 ABCC6O95255 1503 aa20.35■□□□□ 0.85
CMTM3-203ENST00000460097 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
CMTM3-203ENST00000460097 NRAPQ86VF7 1730 aa20.34■□□□□ 0.85
CMTM3-203ENST00000460097 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
CMTM3-203ENST00000460097 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
CMTM3-203ENST00000460097 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
CMTM3-203ENST00000460097 SPATA31A5Q5VU36 1347 aa20.33■□□□□ 0.84
CMTM3-203ENST00000460097 SPATA31A7Q8IWB4 1347 aa20.33■□□□□ 0.84
CMTM3-203ENST00000460097 ANKRD24Q8TF21 1146 aa20.33■□□□□ 0.84
CMTM3-203ENST00000460097 WDR17Q8IZU2 1322 aa20.32■□□□□ 0.84
CMTM3-203ENST00000460097 TOM1L2Q6ZVM7 507 aa20.32■□□□□ 0.84
CMTM3-203ENST00000460097 FLT4P35916 1363 aa20.32■□□□□ 0.84
CMTM3-203ENST00000460097 ERBB3P21860 1342 aa20.31■□□□□ 0.84
CMTM3-203ENST00000460097 MAP2P11137 1827 aaKnown RBP20.31■□□□□ 0.84
CMTM3-203ENST00000460097 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms