RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 CCDC7Q96M83 1385 aa25.92■■□□□ 1.74
CENPA-204ENST00000460030 DEFB132Q7Z7B7 95 aa25.91■■□□□ 1.74
CENPA-204ENST00000460030 WASHC2AQ641Q2 1341 aa25.9■■□□□ 1.74
CENPA-204ENST00000460030 NME9Q86XW9 330 aa25.9■■□□□ 1.74
CENPA-204ENST00000460030 COL5A2P05997 1499 aaPredicted RBP25.9■■□□□ 1.74
CENPA-204ENST00000460030 PANK3Q9H999 370 aa25.89■■□□□ 1.74
CENPA-204ENST00000460030 ZRANB1Q9UGI0 708 aa25.88■■□□□ 1.73
CENPA-204ENST00000460030 SF3B2Q13435 895 aaKnown RBP25.87■■□□□ 1.73
CENPA-204ENST00000460030 AATKQ6ZMQ8 1374 aa25.86■■□□□ 1.73
CENPA-204ENST00000460030 KCNH5Q8NCM2 988 aa25.86■■□□□ 1.73
CENPA-204ENST00000460030 FYB1O15117 783 aa25.85■■□□□ 1.73
CENPA-204ENST00000460030 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
CENPA-204ENST00000460030 TCP11L2Q8N4U5 519 aa25.84■■□□□ 1.73
CENPA-204ENST00000460030 BARGINQ6ZT62 677 aa25.83■■□□□ 1.73
CENPA-204ENST00000460030 AXIN2Q9Y2T1 843 aa25.83■■□□□ 1.73
CENPA-204ENST00000460030 COL18A1P39060 1754 aa25.82■■□□□ 1.72
CENPA-204ENST00000460030 ARHGEF25Q86VW2 580 aa25.82■■□□□ 1.72
CENPA-204ENST00000460030 COG3Q96JB2 828 aa25.82■■□□□ 1.72
CENPA-204ENST00000460030 NFAT5O94916 1531 aa25.82■■□□□ 1.72
CENPA-204ENST00000460030 CGNL1Q0VF96 1302 aa25.82■■□□□ 1.72
CENPA-204ENST00000460030 OVOS2A0A0J9YW53 1432 aa25.81■■□□□ 1.72
CENPA-204ENST00000460030 CRB1P82279 1406 aa25.81■■□□□ 1.72
CENPA-204ENST00000460030 OVOS2Q6IE36 1432 aa25.81■■□□□ 1.72
CENPA-204ENST00000460030 USP54Q70EL1 1684 aa25.78■■□□□ 1.72
CENPA-204ENST00000460030 GGNBP2Q9H3C7 697 aa25.78■■□□□ 1.72
CENPA-204ENST00000460030 TOM1L2Q6ZVM7 507 aa25.77■■□□□ 1.72
CENPA-204ENST00000460030 THRAP3Q9Y2W1 955 aaKnown RBP25.77■■□□□ 1.72
CENPA-204ENST00000460030 BAG6P46379 1132 aa25.76■■□□□ 1.71
CENPA-204ENST00000460030 PDE3BQ13370 1112 aa25.76■■□□□ 1.71
CENPA-204ENST00000460030 KNSTRNQ9Y448 316 aa25.76■■□□□ 1.71
CENPA-204ENST00000460030 RGPD1P0DJD0 1748 aa25.75■■□□□ 1.71
CENPA-204ENST00000460030 WDR17Q8IZU2 1322 aa25.75■■□□□ 1.71
CENPA-204ENST00000460030 SRCAPQ6ZRS2 3230 aa25.75■■□□□ 1.71
CENPA-204ENST00000460030 RGPD5Q99666 1765 aa25.74■■□□□ 1.71
CENPA-204ENST00000460030 PER1O15534 1290 aaPredicted RBP25.73■■□□□ 1.71
CENPA-204ENST00000460030 TRIM37O94972 964 aa25.73■■□□□ 1.71
CENPA-204ENST00000460030 CSB-PGBD3P0DP91 1061 aa25.73■■□□□ 1.71
CENPA-204ENST00000460030 EN1Q05925 392 aaPredicted RBP25.73■■□□□ 1.71
CENPA-204ENST00000460030 FAM196AQ6ZSG2 479 aa25.73■■□□□ 1.71
CENPA-204ENST00000460030 TNS1Q9HBL0 1735 aaKnown RBP25.73■■□□□ 1.71
CENPA-204ENST00000460030 PARP4Q9UKK3 1724 aaKnown RBP25.72■■□□□ 1.71
CENPA-204ENST00000460030 NSD2O96028 1365 aa25.71■■□□□ 1.71
CENPA-204ENST00000460030 AMER1Q5JTC6 1135 aaPredicted RBP25.69■■□□□ 1.7
CENPA-204ENST00000460030 LRRC37A3O60309 1634 aa25.69■■□□□ 1.7
CENPA-204ENST00000460030 ABCC6O95255 1503 aa25.67■■□□□ 1.7
CENPA-204ENST00000460030 DISP2A7MBM2 1401 aa25.66■■□□□ 1.7
CENPA-204ENST00000460030 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
CENPA-204ENST00000460030 WNK3Q9BYP7 1800 aa25.65■■□□□ 1.7
CENPA-204ENST00000460030 LTN1O94822 1766 aa25.65■■□□□ 1.7
CENPA-204ENST00000460030 EZH2Q15910 746 aaKnown RBP25.65■■□□□ 1.7
CENPA-204ENST00000460030 CARD10Q9BWT7 1032 aa25.65■■□□□ 1.7
CENPA-204ENST00000460030 APBA3O96018 575 aa25.64■■□□□ 1.7
CENPA-204ENST00000460030 DDB1Q16531 1140 aa25.64■■□□□ 1.7
CENPA-204ENST00000460030 FBLN1P23142 703 aa25.63■■□□□ 1.69
CENPA-204ENST00000460030 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
CENPA-204ENST00000460030 ERBB3P21860 1342 aa25.63■■□□□ 1.69
CENPA-204ENST00000460030 MAP3K19Q56UN5 1328 aa25.63■■□□□ 1.69
CENPA-204ENST00000460030 PSDA5PKW4 1024 aaPredicted RBP25.62■■□□□ 1.69
CENPA-204ENST00000460030 OVOS2A0A0G2JMS6 1433 aa25.62■■□□□ 1.69
CENPA-204ENST00000460030 MORC1Q86VD1 984 aa25.61■■□□□ 1.69
CENPA-204ENST00000460030 IP6K1Q92551 441 aa25.61■■□□□ 1.69
CENPA-204ENST00000460030 PEAK1Q9H792 1746 aa25.6■■□□□ 1.69
CENPA-204ENST00000460030 ANKRD24Q8TF21 1146 aa25.6■■□□□ 1.69
CENPA-204ENST00000460030 CAMKK2Q96RR4 588 aa25.6■■□□□ 1.69
CENPA-204ENST00000460030 NLRP2Q9NX02 1062 aa25.6■■□□□ 1.69
CENPA-204ENST00000460030 KIF24Q5T7B8 1368 aa25.59■■□□□ 1.69
CENPA-204ENST00000460030 RRS1Q15050 365 aaKnown RBP25.59■■□□□ 1.69
CENPA-204ENST00000460030 AMPHP49418 695 aa25.58■■□□□ 1.69
CENPA-204ENST00000460030 MARCH10Q8NA82 808 aaPredicted RBP25.58■■□□□ 1.69
CENPA-204ENST00000460030 CDCA7Q9BWT1 371 aaPredicted RBP25.58■■□□□ 1.69
CENPA-204ENST00000460030 RTL1A6NKG5 1358 aa25.57■■□□□ 1.68
CENPA-204ENST00000460030 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
CENPA-204ENST00000460030 HOXC9P31274 260 aa25.56■■□□□ 1.68
CENPA-204ENST00000460030 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
CENPA-204ENST00000460030 TNNT2P45379 298 aaPredicted RBP25.55■■□□□ 1.68
CENPA-204ENST00000460030 DDX10Q13206 875 aaKnown RBP25.55■■□□□ 1.68
CENPA-204ENST00000460030 LTV1Q96GA3 475 aaPredicted RBP25.55■■□□□ 1.68
CENPA-204ENST00000460030 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
CENPA-204ENST00000460030 R3HDM1Q15032 1099 aaKnown RBP25.54■■□□□ 1.68
CENPA-204ENST00000460030 PTF1AQ7RTS3 328 aa25.54■■□□□ 1.68
CENPA-204ENST00000460030 POLKQ9UBT6 870 aa25.54■■□□□ 1.68
CENPA-204ENST00000460030 EXOC5O00471 708 aa25.53■■□□□ 1.68
CENPA-204ENST00000460030 EMILIN1Q9Y6C2 1016 aa25.53■■□□□ 1.68
CENPA-204ENST00000460030 FLT4P35916 1363 aa25.53■■□□□ 1.68
CENPA-204ENST00000460030 TNS2Q63HR2 1409 aa25.53■■□□□ 1.68
CENPA-204ENST00000460030 PARD3Q8TEW0 1356 aa25.51■■□□□ 1.67
CENPA-204ENST00000460030 RREB1Q92766 1687 aa25.51■■□□□ 1.67
CENPA-204ENST00000460030 INSRP06213 1382 aa25.5■■□□□ 1.67
CENPA-204ENST00000460030 SBF2Q86WG5 1849 aa25.49■■□□□ 1.67
CENPA-204ENST00000460030 IL2RBP14784 551 aa25.49■■□□□ 1.67
CENPA-204ENST00000460030 HSP90AB2PQ58FF8 381 aa25.49■■□□□ 1.67
CENPA-204ENST00000460030 PPM1GO15355 546 aaPredicted RBP25.48■■□□□ 1.67
CENPA-204ENST00000460030 NUP188Q5SRE5 1749 aa25.48■■□□□ 1.67
CENPA-204ENST00000460030 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
CENPA-204ENST00000460030 BCL11BQ9C0K0 894 aaPredicted RBP25.46■■□□□ 1.67
CENPA-204ENST00000460030 BCL9O00512 1426 aa25.46■■□□□ 1.67
CENPA-204ENST00000460030 CNGB1Q14028 1251 aaPredicted RBP25.44■■□□□ 1.66
CENPA-204ENST00000460030 ACSBG1Q96GR2 724 aa25.43■■□□□ 1.66
CENPA-204ENST00000460030 FAM208AQ9UK61 1670 aaKnown RBP25.42■■□□□ 1.66
CENPA-204ENST00000460030 KCNQ2O43526 872 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms