RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 RGPD4Q7Z3J3 1758 aa37.8■■■■□ 3.64
PBRM1-218ENST00000458294 DDB1Q16531 1140 aa37.79■■■■□ 3.64
PBRM1-218ENST00000458294 KCNH5Q8NCM2 988 aa37.79■■■■□ 3.64
PBRM1-218ENST00000458294 TTC21BQ7Z4L5 1316 aa37.79■■■■□ 3.64
PBRM1-218ENST00000458294 SBF2Q86WG5 1849 aa37.78■■■■□ 3.64
PBRM1-218ENST00000458294 TTC21AQ8NDW8 1320 aa37.77■■■■□ 3.64
PBRM1-218ENST00000458294 ARHGEF25Q86VW2 580 aa37.76■■■■□ 3.64
PBRM1-218ENST00000458294 AXIN2Q9Y2T1 843 aa37.76■■■■□ 3.64
PBRM1-218ENST00000458294 CDCA7Q9BWT1 371 aaPredicted RBP37.74■■■■□ 3.63
PBRM1-218ENST00000458294 PLSCR1O15162 318 aa37.72■■■■□ 3.63
PBRM1-218ENST00000458294 RGPD5Q99666 1765 aa37.71■■■■□ 3.63
PBRM1-218ENST00000458294 NEUROD1Q13562 356 aa37.71■■■■□ 3.63
PBRM1-218ENST00000458294 BCL9O00512 1426 aa37.69■■■■□ 3.62
PBRM1-218ENST00000458294 NFAT5O94916 1531 aa37.68■■■■□ 3.62
PBRM1-218ENST00000458294 KTN1Q86UP2 1357 aaKnown RBP37.68■■■■□ 3.62
PBRM1-218ENST00000458294 MON2Q7Z3U7 1717 aa37.67■■■■□ 3.62
PBRM1-218ENST00000458294 ABCC6O95255 1503 aa37.67■■■■□ 3.62
PBRM1-218ENST00000458294 CARD10Q9BWT7 1032 aa37.67■■■■□ 3.62
PBRM1-218ENST00000458294 BCL11BQ9C0K0 894 aaPredicted RBP37.67■■■■□ 3.62
PBRM1-218ENST00000458294 SBNO2Q9Y2G9 1366 aa37.66■■■■□ 3.62
PBRM1-218ENST00000458294 SOX12O15370 315 aa37.65■■■■□ 3.62
PBRM1-218ENST00000458294 CSB-PGBD3P0DP91 1061 aa37.64■■■■□ 3.62
PBRM1-218ENST00000458294 MARCH10Q8NA82 808 aaPredicted RBP37.64■■■■□ 3.62
PBRM1-218ENST00000458294 SPON1Q9HCB6 807 aa37.64■■■■□ 3.62
PBRM1-218ENST00000458294 CCDC7Q96M83 1385 aa37.6■■■■□ 3.61
PBRM1-218ENST00000458294 KCNQ2O43526 872 aa37.6■■■■□ 3.61
PBRM1-218ENST00000458294 USP54Q70EL1 1684 aa37.6■■■■□ 3.61
PBRM1-218ENST00000458294 USP31Q70CQ4 1352 aa37.57■■■■□ 3.61
PBRM1-218ENST00000458294 PTF1AQ7RTS3 328 aa37.57■■■■□ 3.6
PBRM1-218ENST00000458294 PPP1R1BQ9UD71 204 aaPredicted RBP37.57■■■■□ 3.6
PBRM1-218ENST00000458294 EXOC5O00471 708 aa37.55■■■■□ 3.6
PBRM1-218ENST00000458294 ANO8Q9HCE9 1232 aaPredicted RBP37.54■■■■□ 3.6
PBRM1-218ENST00000458294 CASZ1Q86V15 1759 aa37.53■■■■□ 3.6
PBRM1-218ENST00000458294 TNS2Q63HR2 1409 aa37.53■■■■□ 3.6
PBRM1-218ENST00000458294 CD163L1Q9NR16 1453 aa37.52■■■■□ 3.6
PBRM1-218ENST00000458294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.52■■■■□ 3.6
PBRM1-218ENST00000458294 CARD11Q9BXL7 1154 aa37.52■■■■□ 3.6
PBRM1-218ENST00000458294 NINLQ9Y2I6 1382 aa37.52■■■■□ 3.6
PBRM1-218ENST00000458294 PROM2Q8N271 834 aa37.5■■■■□ 3.59
PBRM1-218ENST00000458294 LTN1O94822 1766 aa37.47■■■■□ 3.59
PBRM1-218ENST00000458294 ERBB3P21860 1342 aa37.47■■■■□ 3.59
PBRM1-218ENST00000458294 HDGFL2Q7Z4V5 671 aaPredicted RBP37.46■■■■□ 3.59
PBRM1-218ENST00000458294 NME9Q86XW9 330 aa37.46■■■■□ 3.59
PBRM1-218ENST00000458294 TMC1Q8TDI8 760 aa37.45■■■■□ 3.59
PBRM1-218ENST00000458294 TXNRD1Q16881 649 aa37.44■■■■□ 3.58
PBRM1-218ENST00000458294 EDC4Q6P2E9 1401 aaKnown RBP37.44■■■■□ 3.58
PBRM1-218ENST00000458294 NHSQ6T4R5 1651 aa37.44■■■■□ 3.58
PBRM1-218ENST00000458294 DCAF8L1A6NGE4 600 aa37.4■■■■□ 3.58
PBRM1-218ENST00000458294 SLC12A5Q9H2X9 1139 aa37.4■■■■□ 3.58
PBRM1-218ENST00000458294 NLRP2Q9NX02 1062 aa37.4■■■■□ 3.58
PBRM1-218ENST00000458294 STK32BQ9NY57 414 aa37.4■■■■□ 3.58
PBRM1-218ENST00000458294 YY1P25490 414 aa37.38■■■■□ 3.57
PBRM1-218ENST00000458294 PUS7Q96PZ0 661 aaKnown RBP37.38■■■■□ 3.57
PBRM1-218ENST00000458294 TERF2IPQ9NYB0 399 aa37.38■■■■□ 3.57
PBRM1-218ENST00000458294 IL2RBP14784 551 aa37.37■■■■□ 3.57
PBRM1-218ENST00000458294 PDGFDQ9GZP0 370 aaPredicted RBP37.37■■■■□ 3.57
PBRM1-218ENST00000458294 SLC15A2Q16348 729 aa37.36■■■■□ 3.57
PBRM1-218ENST00000458294 ANKRD24Q8TF21 1146 aa37.36■■■■□ 3.57
PBRM1-218ENST00000458294 A0A1W2PP64 1363 aa37.36■■■■□ 3.57
PBRM1-218ENST00000458294 TONSLQ96HA7 1378 aa37.36■■■■□ 3.57
PBRM1-218ENST00000458294 ZBTB7AO95365 584 aa37.33■■■■□ 3.57
PBRM1-218ENST00000458294 ACSBG1Q96GR2 724 aa37.31■■■■□ 3.56
PBRM1-218ENST00000458294 MYOM1P52179 1685 aa37.31■■■■□ 3.56
PBRM1-218ENST00000458294 PTGER2P43116 358 aa37.29■■■■□ 3.56
PBRM1-218ENST00000458294 FAM208AQ9UK61 1670 aaKnown RBP37.28■■■■□ 3.56
PBRM1-218ENST00000458294 BTAF1O14981 1849 aa37.27■■■■□ 3.56
PBRM1-218ENST00000458294 PAPPAQ13219 1627 aa37.26■■■■□ 3.56
PBRM1-218ENST00000458294 ATF5Q9Y2D1 282 aaPredicted RBP37.25■■■■□ 3.55
PBRM1-218ENST00000458294 IP6K1Q92551 441 aa37.24■■■■□ 3.55
PBRM1-218ENST00000458294 MTFR1LQ9H019 292 aa37.24■■■■□ 3.55
PBRM1-218ENST00000458294 SLC24A1O60721 1099 aa37.21■■■■□ 3.55
PBRM1-218ENST00000458294 TESK2Q96S53 571 aa37.2■■■■□ 3.55
PBRM1-218ENST00000458294 ST20-MTHFSA0A0A6YYL1 179 aa37.16■■■■□ 3.54
PBRM1-218ENST00000458294 COG3Q96JB2 828 aa37.16■■■■□ 3.54
PBRM1-218ENST00000458294 SGIP1Q9BQI5 828 aa37.16■■■■□ 3.54
PBRM1-218ENST00000458294 KAT6BQ8WYB5 2073 aa37.16■■■■□ 3.54
PBRM1-218ENST00000458294 FHDC1Q9C0D6 1143 aaPredicted RBP37.14■■■■□ 3.54
PBRM1-218ENST00000458294 LTV1Q96GA3 475 aaPredicted RBP37.13■■■■□ 3.53
PBRM1-218ENST00000458294 SYT17Q9BSW7 474 aa37.12■■■■□ 3.53
PBRM1-218ENST00000458294 MAP3K19Q56UN5 1328 aa37.11■■■■□ 3.53
PBRM1-218ENST00000458294 DDX54Q8TDD1 881 aaKnown RBP37.11■■■■□ 3.53
PBRM1-218ENST00000458294 HOXC9P31274 260 aa37.1■■■■□ 3.53
PBRM1-218ENST00000458294 LRRC4BQ9NT99 713 aa37.1■■■■□ 3.53
PBRM1-218ENST00000458294 ANKRD36BQ8N2N9 1353 aa37.09■■■■□ 3.53
PBRM1-218ENST00000458294 ZNF827Q17R98 1081 aa37.09■■■■□ 3.53
PBRM1-218ENST00000458294 AMPHP49418 695 aa37.08■■■■□ 3.53
PBRM1-218ENST00000458294 SLC27A3Q5K4L6 730 aa37.08■■■■□ 3.53
PBRM1-218ENST00000458294 QSER1Q2KHR3 1735 aa37.07■■■■□ 3.52
PBRM1-218ENST00000458294 ARXQ96QS3 562 aa37.06■■■■□ 3.52
PBRM1-218ENST00000458294 RTL1A6NKG5 1358 aa37.04■■■■□ 3.52
PBRM1-218ENST00000458294 DOT1LQ8TEK3 1739 aa37.04■■■■□ 3.52
PBRM1-218ENST00000458294 RGPD2P0DJD1 1756 aa37.04■■■■□ 3.52
PBRM1-218ENST00000458294 MAP3K5Q99683 1374 aa37.04■■■■□ 3.52
PBRM1-218ENST00000458294 AKT1S1Q96B36 256 aa37.03■■■■□ 3.52
PBRM1-218ENST00000458294 SHANK3Q9BYB0 1731 aa37.02■■■■□ 3.52
PBRM1-218ENST00000458294 FBLN1P23142 703 aa37■■■■□ 3.51
PBRM1-218ENST00000458294 SLC16A10Q8TF71 515 aa37■■■■□ 3.51
PBRM1-218ENST00000458294 UTRNP46939 3433 aa36.99■■■■□ 3.51
PBRM1-218ENST00000458294 ZCRB1Q8TBF4 217 aaKnown RBP36.99■■■■□ 3.51
PBRM1-218ENST00000458294 SYTL4Q96C24 671 aaPredicted RBP36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms