RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 ABCA6Q8N139 1617 aa9.23□□□□□ -0.93
CDKN3-205ENST00000458126 ITSN2Q9NZM3 1697 aa9.23□□□□□ -0.93
CDKN3-205ENST00000458126 ABCC3O15438 1527 aa9.22□□□□□ -0.93
CDKN3-205ENST00000458126 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
CDKN3-205ENST00000458126 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
CDKN3-205ENST00000458126 IGF1RP08069 1367 aa9.22□□□□□ -0.93
CDKN3-205ENST00000458126 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.93
CDKN3-205ENST00000458126 TIAM1Q13009 1591 aa9.21□□□□□ -0.93
CDKN3-205ENST00000458126 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
CDKN3-205ENST00000458126 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.94
CDKN3-205ENST00000458126 ARID3CA6NKF2 412 aa9.21□□□□□ -0.94
CDKN3-205ENST00000458126 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
CDKN3-205ENST00000458126 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.94
CDKN3-205ENST00000458126 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.94
CDKN3-205ENST00000458126 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
CDKN3-205ENST00000458126 FCHSD2O94868 740 aa9.2□□□□□ -0.94
CDKN3-205ENST00000458126 RGS19P49795 217 aa9.2□□□□□ -0.94
CDKN3-205ENST00000458126 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
CDKN3-205ENST00000458126 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
CDKN3-205ENST00000458126 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
CDKN3-205ENST00000458126 PDE4DIPQ5VU43 2346 aa9.19□□□□□ -0.94
CDKN3-205ENST00000458126 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
CDKN3-205ENST00000458126 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
CDKN3-205ENST00000458126 MSH6P52701 1360 aa9.19□□□□□ -0.94
CDKN3-205ENST00000458126 DISP2A7MBM2 1401 aa9.19□□□□□ -0.94
CDKN3-205ENST00000458126 SETD5Q9C0A6 1442 aa9.18□□□□□ -0.94
CDKN3-205ENST00000458126 FAM135AQ9P2D6 1515 aa9.18□□□□□ -0.94
CDKN3-205ENST00000458126 ADGRG1Q9Y653 693 aa9.18□□□□□ -0.94
CDKN3-205ENST00000458126 USP19O94966 1318 aa9.17□□□□□ -0.94
CDKN3-205ENST00000458126 DLL1O00548 723 aa9.17□□□□□ -0.94
CDKN3-205ENST00000458126 DNAJB2P25686 324 aa9.17□□□□□ -0.94
CDKN3-205ENST00000458126 IL21Q9HBE4 155 aa9.17□□□□□ -0.94
CDKN3-205ENST00000458126 MLH3Q9UHC1 1453 aa9.16□□□□□ -0.94
CDKN3-205ENST00000458126 RNF40O75150 1001 aa9.16□□□□□ -0.94
CDKN3-205ENST00000458126 GJD4Q96KN9 370 aaPredicted RBP9.16□□□□□ -0.94
CDKN3-205ENST00000458126 UGGT1Q9NYU2 1555 aa9.16□□□□□ -0.94
CDKN3-205ENST00000458126 TNRQ92752 1358 aa9.15□□□□□ -0.94
CDKN3-205ENST00000458126 BRWD3Q6RI45 1802 aa9.15□□□□□ -0.94
CDKN3-205ENST00000458126 HIC1Q14526 733 aa9.15□□□□□ -0.94
CDKN3-205ENST00000458126 MTRQ99707 1265 aa9.15□□□□□ -0.94
CDKN3-205ENST00000458126 PRR14Q9BWN1 585 aa9.15□□□□□ -0.94
CDKN3-205ENST00000458126 PRDM15P57071 1507 aaPredicted RBP9.15□□□□□ -0.95
CDKN3-205ENST00000458126 CAMSAP2Q08AD1 1489 aa9.15□□□□□ -0.95
CDKN3-205ENST00000458126 CUL9Q8IWT3 2517 aa9.14□□□□□ -0.95
CDKN3-205ENST00000458126 ADAMTS2O95450 1211 aa9.14□□□□□ -0.95
CDKN3-205ENST00000458126 SYT17Q9BSW7 474 aa9.14□□□□□ -0.95
CDKN3-205ENST00000458126 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
CDKN3-205ENST00000458126 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
CDKN3-205ENST00000458126 NRKQ7Z2Y5 1582 aa9.14□□□□□ -0.95
CDKN3-205ENST00000458126 ATP10DQ9P241 1426 aa9.14□□□□□ -0.95
CDKN3-205ENST00000458126 OATP04181 439 aa9.13□□□□□ -0.95
CDKN3-205ENST00000458126 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
CDKN3-205ENST00000458126 GOLGB1Q14789 3259 aaKnown RBP9.13□□□□□ -0.95
CDKN3-205ENST00000458126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.12□□□□□ -0.95
CDKN3-205ENST00000458126 RCCD1A6NED2 376 aa9.12□□□□□ -0.95
CDKN3-205ENST00000458126 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
CDKN3-205ENST00000458126 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
CDKN3-205ENST00000458126 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
CDKN3-205ENST00000458126 A2MP01023 1474 aa9.12□□□□□ -0.95
CDKN3-205ENST00000458126 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
CDKN3-205ENST00000458126 WDR90Q96KV7 1748 aa9.11□□□□□ -0.95
CDKN3-205ENST00000458126 KDM5AP29375 1690 aaKnown RBP9.11□□□□□ -0.95
CDKN3-205ENST00000458126 EZH2Q15910 746 aaKnown RBP9.11□□□□□ -0.95
CDKN3-205ENST00000458126 RBM26Q5T8P6 1007 aaKnown RBP9.11□□□□□ -0.95
CDKN3-205ENST00000458126 DLC1Q96QB1 1528 aa9.1□□□□□ -0.95
CDKN3-205ENST00000458126 NLRP1Q9C000 1473 aa9.1□□□□□ -0.95
CDKN3-205ENST00000458126 IRX2Q9BZI1 471 aaPredicted RBP9.1□□□□□ -0.95
CDKN3-205ENST00000458126 CACNA1AO00555 2505 aa9.09□□□□□ -0.95
CDKN3-205ENST00000458126 GNPATO15228 680 aa9.09□□□□□ -0.95
CDKN3-205ENST00000458126 KCNA6P17658 529 aa9.09□□□□□ -0.95
CDKN3-205ENST00000458126 FHDC1Q9C0D6 1143 aaPredicted RBP9.09□□□□□ -0.95
CDKN3-205ENST00000458126 MYOM1P52179 1685 aa9.09□□□□□ -0.95
CDKN3-205ENST00000458126 CARMIL1Q5VZK9 1371 aa9.09□□□□□ -0.95
CDKN3-205ENST00000458126 RGPD1P0DJD0 1748 aa9.08□□□□□ -0.96
CDKN3-205ENST00000458126 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
CDKN3-205ENST00000458126 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
CDKN3-205ENST00000458126 LRRC59Q96AG4 307 aaKnown RBP9.08□□□□□ -0.96
CDKN3-205ENST00000458126 GLI3P10071 1580 aa9.07□□□□□ -0.96
CDKN3-205ENST00000458126 CAMKK2Q96RR4 588 aa9.07□□□□□ -0.96
CDKN3-205ENST00000458126 NKTRP30414 1462 aaKnown RBP9.07□□□□□ -0.96
CDKN3-205ENST00000458126 TNRC18O15417 2968 aaPredicted RBP9.06□□□□□ -0.96
CDKN3-205ENST00000458126 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 GPR37O15354 613 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 KRT27Q7Z3Y8 459 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 PARD3Q8TEW0 1356 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 GOLGA3Q08378 1498 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 MAST1Q9Y2H9 1570 aa9.06□□□□□ -0.96
CDKN3-205ENST00000458126 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
CDKN3-205ENST00000458126 GPR162Q16538 588 aa9.05□□□□□ -0.96
CDKN3-205ENST00000458126 PPP1R18Q6NYC8 613 aa9.05□□□□□ -0.96
CDKN3-205ENST00000458126 METTL3Q86U44 580 aaKnown RBP9.05□□□□□ -0.96
CDKN3-205ENST00000458126 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
CDKN3-205ENST00000458126 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
CDKN3-205ENST00000458126 ZPR1O75312 459 aa9.04□□□□□ -0.96
CDKN3-205ENST00000458126 COPS2P61201 443 aa9.04□□□□□ -0.96
CDKN3-205ENST00000458126 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
CDKN3-205ENST00000458126 RSPH4AQ5TD94 716 aa9.04□□□□□ -0.96
CDKN3-205ENST00000458126 NBPF14Q5TI25 921 aa9.04□□□□□ -0.96
CDKN3-205ENST00000458126 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms