RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 SLC10A4Q96EP9 437 aa10.79□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 TRIM34Q9BYJ4 488 aa10.79□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 GPSM3Q9Y4H4 160 aa10.79□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 CCDC116Q8IYX3 515 aa10.78□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 PNMA1Q8ND90 353 aa10.77□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 ADAM32Q8TC27 787 aa10.77□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 KCTD15Q96SI1 283 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 LCE2CQ5TA81 110 aa10.76□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 EMILIN1Q9Y6C2 1016 aa10.76□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 C6orf118Q5T5N4 469 aa10.75□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 PPP1R26Q5T8A7 1209 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 MEIOBQ8N635 442 aa10.75□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 CDV3Q9UKY7 258 aaKnown RBP10.75□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 GJD4Q96KN9 370 aaPredicted RBP10.74□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 SOBPA7XYQ1 873 aa10.73□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 LINC00528Q8N1L1 170 aa10.73□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 NXF1Q9UBU9 619 aaKnown RBP10.73□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 BMP2P12643 396 aa10.72□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 INTS6LQ5JSJ4 861 aaKnown RBP10.72□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
PCDH9-AS4-201ENST00000456459 UPP2O95045 317 aa10.7□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 CBLBQ13191 982 aa10.7□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 VEGFBP49765 207 aa10.69□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 DZIP3Q86Y13 1208 aaKnown RBP10.69□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 DHX9Q08211 1270 aaKnown RBP10.68□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 Q6ZVU0 165 aa10.68□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 BANK1Q8NDB2 785 aa10.68□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 TSEN34Q9BSV6 310 aaKnown RBP10.68□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 SOS2Q07890 1332 aaPredicted RBP10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 ZBBXA8MT70 800 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 WIPF1O43516 503 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 MAN1A2O60476 641 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 RAB15P59190 212 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 NPAS3Q8IXF0 933 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 SLC16A10Q8TF71 515 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 TMPRSS4Q9NRS4 437 aa10.66□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 H3BM21 787 aa10.65□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 FBXO45P0C2W1 286 aa10.65□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 SNRKQ9NRH2 765 aa10.65□□□□□ -0.7
PCDH9-AS4-201ENST00000456459 ESPNB1AK53 854 aa10.64□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 ERVH48-1M5A8F1 160 aa10.63□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 GPR37L1O60883 481 aa10.63□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 AGBL1Q96MI9 1066 aa10.63□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 SOCS7O14512 581 aa10.62□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 ZNF784Q8NCA9 323 aaPredicted RBP10.62□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 PCDHB9Q9Y5E1 797 aa10.62□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 SPINT1O43278 529 aa10.61□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 IRF7Q92985 503 aa10.61□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 ERBB4Q15303 1308 aa10.6□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 TTLL8A6PVC2 850 aa10.6□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 LILRA1O75019 489 aa10.6□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 GIGYF1O75420 1035 aaPredicted RBP10.59□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 ADD1P35611 737 aaKnown RBP10.59□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 GMPRP36959 345 aa10.59□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 RELBQ01201 579 aa10.59□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 NDUFB9Q9Y6M9 179 aa10.59□□□□□ -0.71
PCDH9-AS4-201ENST00000456459 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 NR1H3Q13133 447 aa10.58□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.57□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 KDF1Q8NAX2 398 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 ZNF395Q9H8N7 513 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 PPFIA3O75145 1194 aa10.55□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 ADH1AP07327 375 aa10.55□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 CYLDQ9NQC7 956 aa10.55□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 APBB1O00213 710 aa10.54□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 PTSQ03393 145 aa10.53□□□□□ -0.72
PCDH9-AS4-201ENST00000456459 VSIG8P0DPA2 414 aa10.52□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 PTGIRP43119 386 aa10.51□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 MCCD1P59942 119 aaPredicted RBP10.51□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 ZNF330Q9Y3S2 320 aaPredicted RBP10.51□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 RNF217Q8TC41 542 aa10.5□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 RNF20Q5VTR2 975 aa10.49□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 LORP23490 312 aaPredicted RBP10.48□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 SLC35F4A4IF30 521 aa10.47□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 ERVK-9P63128 1117 aa10.47□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 ZNF592Q92610 1267 aa10.47□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 ATP5J2-PTCD1G3V325 749 aa10.46□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 SCTRP47872 440 aa10.46□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 IRF5Q13568 498 aa10.46□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 CC2D2BQ6DHV5 1058 aa10.46□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 PCDHB11Q9Y5F2 797 aa10.46□□□□□ -0.73
PCDH9-AS4-201ENST00000456459 ZSCAN1Q8NBB4 408 aa10.44□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 PRM3Q9NNZ6 103 aa10.44□□□□□ -0.74
PCDH9-AS4-201ENST00000456459 CEP126Q9P2H0 1117 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms