RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 SLC4A3P48751 1232 aa25.54■■□□□ 1.68
CSPG5-203ENST00000456150 CALD1Q05682 793 aaKnown RBP25.54■■□□□ 1.68
CSPG5-203ENST00000456150 USP19O94966 1318 aa25.54■■□□□ 1.68
CSPG5-203ENST00000456150 NOB1Q9ULX3 412 aaKnown RBP25.54■■□□□ 1.68
CSPG5-203ENST00000456150 NFE2L2Q16236 605 aa25.53■■□□□ 1.68
CSPG5-203ENST00000456150 ITPRIPQ8IWB1 547 aa25.53■■□□□ 1.68
CSPG5-203ENST00000456150 NUDT16Q96DE0 195 aaKnown RBP25.53■■□□□ 1.68
CSPG5-203ENST00000456150 HDAC1Q13547 482 aaPredicted RBP25.52■■□□□ 1.68
CSPG5-203ENST00000456150 KDM4FA0A1W2PPD8 638 aa25.52■■□□□ 1.68
CSPG5-203ENST00000456150 CCDC61Q9Y6R9 512 aa25.52■■□□□ 1.68
CSPG5-203ENST00000456150 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
CSPG5-203ENST00000456150 AMOTL2Q9Y2J4 779 aa25.51■■□□□ 1.67
CSPG5-203ENST00000456150 NME9Q86XW9 330 aa25.51■■□□□ 1.67
CSPG5-203ENST00000456150 COG3Q96JB2 828 aa25.5■■□□□ 1.67
CSPG5-203ENST00000456150 UPF2Q9HAU5 1272 aaKnown RBP25.5■■□□□ 1.67
CSPG5-203ENST00000456150 IL13P35225 146 aa25.49■■□□□ 1.67
CSPG5-203ENST00000456150 EMILIN1Q9Y6C2 1016 aa25.49■■□□□ 1.67
CSPG5-203ENST00000456150 FBLN1P23142 703 aa25.49■■□□□ 1.67
CSPG5-203ENST00000456150 BRPF1P55201 1214 aaPredicted RBP25.48■■□□□ 1.67
CSPG5-203ENST00000456150 ZNF692Q9BU19 519 aaPredicted RBP25.48■■□□□ 1.67
CSPG5-203ENST00000456150 SEC24BO95487 1268 aa25.47■■□□□ 1.67
CSPG5-203ENST00000456150 HMOX1P09601 288 aa25.47■■□□□ 1.67
CSPG5-203ENST00000456150 TMEM57Q8N5G2 664 aa25.47■■□□□ 1.67
CSPG5-203ENST00000456150 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
CSPG5-203ENST00000456150 NCKAP5LQ9HCH0 1330 aa25.45■■□□□ 1.67
CSPG5-203ENST00000456150 GNAI1P63096 354 aa25.45■■□□□ 1.66
CSPG5-203ENST00000456150 LMOD3Q0VAK6 560 aa25.45■■□□□ 1.66
CSPG5-203ENST00000456150 BECN1Q14457 450 aa25.45■■□□□ 1.66
CSPG5-203ENST00000456150 NFKBIBQ15653 356 aa25.45■■□□□ 1.66
CSPG5-203ENST00000456150 PHACTR3Q96KR7 559 aa25.45■■□□□ 1.66
CSPG5-203ENST00000456150 ZBTB40Q9NUA8 1239 aa25.44■■□□□ 1.66
CSPG5-203ENST00000456150 IFT57Q9NWB7 429 aa25.44■■□□□ 1.66
CSPG5-203ENST00000456150 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
CSPG5-203ENST00000456150 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
CSPG5-203ENST00000456150 KCNA6P17658 529 aa25.42■■□□□ 1.66
CSPG5-203ENST00000456150 ZRANB1Q9UGI0 708 aa25.42■■□□□ 1.66
CSPG5-203ENST00000456150 NPHP4O75161 1426 aaPredicted RBP25.42■■□□□ 1.66
CSPG5-203ENST00000456150 SMC5Q8IY18 1101 aa25.41■■□□□ 1.66
CSPG5-203ENST00000456150 NRKQ7Z2Y5 1582 aa25.41■■□□□ 1.66
CSPG5-203ENST00000456150 CHMP4BQ9H444 224 aaKnown RBP25.41■■□□□ 1.66
CSPG5-203ENST00000456150 PTCH1Q13635 1447 aa25.41■■□□□ 1.66
CSPG5-203ENST00000456150 ARHGAP45Q92619 1136 aa25.4■■□□□ 1.66
CSPG5-203ENST00000456150 TBC1D32Q96NH3 1257 aa25.4■■□□□ 1.66
CSPG5-203ENST00000456150 TOPAZ1Q8N9V7 1692 aa25.39■■□□□ 1.66
CSPG5-203ENST00000456150 ZNF853P0CG23 659 aa25.38■■□□□ 1.65
CSPG5-203ENST00000456150 PIK3R4Q99570 1358 aa25.38■■□□□ 1.65
CSPG5-203ENST00000456150 PRR36Q9H6K5 1346 aa25.38■■□□□ 1.65
CSPG5-203ENST00000456150 VAMP4O75379 141 aa25.38■■□□□ 1.65
CSPG5-203ENST00000456150 RRS1Q15050 365 aaKnown RBP25.37■■□□□ 1.65
CSPG5-203ENST00000456150 MRPL50Q8N5N7 158 aaKnown RBP25.36■■□□□ 1.65
CSPG5-203ENST00000456150 THUMPD2Q9BTF0 503 aaKnown RBP25.36■■□□□ 1.65
CSPG5-203ENST00000456150 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
CSPG5-203ENST00000456150 HSPA2P54652 639 aa25.35■■□□□ 1.65
CSPG5-203ENST00000456150 CFAP44Q96MT7 982 aa25.35■■□□□ 1.65
CSPG5-203ENST00000456150 MBIPQ9NS73 344 aa25.35■■□□□ 1.65
CSPG5-203ENST00000456150 NUTM2FA1L443 756 aa25.33■■□□□ 1.65
CSPG5-203ENST00000456150 TTC21BQ7Z4L5 1316 aa25.32■■□□□ 1.64
CSPG5-203ENST00000456150 RBM33Q96EV2 1170 aaKnown RBP25.32■■□□□ 1.64
CSPG5-203ENST00000456150 NALCNQ8IZF0 1738 aa25.31■■□□□ 1.64
CSPG5-203ENST00000456150 NUCB1Q02818 461 aa25.31■■□□□ 1.64
CSPG5-203ENST00000456150 TSPYL6Q8N831 410 aa25.31■■□□□ 1.64
CSPG5-203ENST00000456150 OVOS2A0A0J9YW53 1432 aa25.31■■□□□ 1.64
CSPG5-203ENST00000456150 OVOS2Q6IE36 1432 aa25.31■■□□□ 1.64
CSPG5-203ENST00000456150 PLEKHG3A1L390 1219 aa25.3■■□□□ 1.64
CSPG5-203ENST00000456150 TWISTNBQ3B726 338 aaPredicted RBP25.3■■□□□ 1.64
CSPG5-203ENST00000456150 ACEP12821 1306 aa25.29■■□□□ 1.64
CSPG5-203ENST00000456150 ZBTB7BO15156 539 aaPredicted RBP25.28■■□□□ 1.64
CSPG5-203ENST00000456150 USP6P35125 1406 aa25.28■■□□□ 1.64
CSPG5-203ENST00000456150 ABCC4O15439 1325 aa25.28■■□□□ 1.64
CSPG5-203ENST00000456150 GSE1Q14687 1217 aa25.27■■□□□ 1.64
CSPG5-203ENST00000456150 LMTK3Q96Q04 1460 aa25.26■■□□□ 1.63
CSPG5-203ENST00000456150 EIF4A2Q14240 407 aaKnown RBP25.26■■□□□ 1.63
CSPG5-203ENST00000456150 GCC1Q96CN9 775 aa25.26■■□□□ 1.63
CSPG5-203ENST00000456150 API5Q9BZZ5 524 aaKnown RBP25.26■■□□□ 1.63
CSPG5-203ENST00000456150 HAP1P54257 671 aaPredicted RBP25.25■■□□□ 1.63
CSPG5-203ENST00000456150 CHD1LQ86WJ1 897 aa25.25■■□□□ 1.63
CSPG5-203ENST00000456150 ELL2O00472 640 aaPredicted RBP25.24■■□□□ 1.63
CSPG5-203ENST00000456150 FRAT2O75474 233 aaPredicted RBP25.24■■□□□ 1.63
CSPG5-203ENST00000456150 C22orf23Q9BZE7 217 aa25.24■■□□□ 1.63
CSPG5-203ENST00000456150 C8orf58Q8NAV2 365 aa25.24■■□□□ 1.63
CSPG5-203ENST00000456150 RGPD1P0DJD0 1748 aa25.23■■□□□ 1.63
CSPG5-203ENST00000456150 FAM83GA6ND36 823 aa25.23■■□□□ 1.63
CSPG5-203ENST00000456150 KIF24Q5T7B8 1368 aa25.23■■□□□ 1.63
CSPG5-203ENST00000456150 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
CSPG5-203ENST00000456150 MFAP1P55081 439 aaKnown RBP25.22■■□□□ 1.63
CSPG5-203ENST00000456150 SULT6B1Q6IMI4 303 aa25.22■■□□□ 1.63
CSPG5-203ENST00000456150 PEAK1Q9H792 1746 aa25.22■■□□□ 1.63
CSPG5-203ENST00000456150 TBC1D2Q9BYX2 928 aa25.22■■□□□ 1.63
CSPG5-203ENST00000456150 LNPKQ9C0E8 428 aa25.22■■□□□ 1.63
CSPG5-203ENST00000456150 TTC21AQ8NDW8 1320 aa25.2■■□□□ 1.62
CSPG5-203ENST00000456150 SSH2Q76I76 1423 aa25.2■■□□□ 1.62
CSPG5-203ENST00000456150 DCTN1Q14203 1278 aa25.19■■□□□ 1.62
CSPG5-203ENST00000456150 AEBP1Q8IUX7 1158 aa25.19■■□□□ 1.62
CSPG5-203ENST00000456150 FMN2Q9NZ56 1722 aa25.19■■□□□ 1.62
CSPG5-203ENST00000456150 NWD1Q149M9 1564 aa25.19■■□□□ 1.62
CSPG5-203ENST00000456150 RGPD8O14715 1765 aaPredicted RBP25.19■■□□□ 1.62
CSPG5-203ENST00000456150 SLKQ9H2G2 1235 aaPredicted RBP25.18■■□□□ 1.62
CSPG5-203ENST00000456150 ANTXR1Q9H6X2 564 aa25.18■■□□□ 1.62
CSPG5-203ENST00000456150 BMP2KLQ5H9B9 411 aa25.17■■□□□ 1.62
CSPG5-203ENST00000456150 ANKRD45Q5TZF3 282 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms